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• 1. [Image] A conservation strategy for the northern spotted owl

  	ill., maps; Shipping list no.: 90-263-P; "May 1990."; Includes bibliographical references
  	Citation × Citation Citation Abstract Copy Title: A conservation strategy for the northern spotted owl Author: Thomas, Jack Ward Year: 1990, 2010 ill., maps; Shipping list no.: 90-263-P; "May 1990."; Includes bibliographical references Title: A conservation strategy for the northern spotted owl Author: Thomas, Jack Ward Year: 1990, 2010 ill., maps; Shipping list no.: 90-263-P; "May 1990."; Includes bibliographical references Close

• 2. [Article] ODFW Conservation Opportunity Areas

  Abstract -- Conservation Opportunity Areas were developed for the Comprehensive Wildlife Conservation Strategy to help identify priority areas for conservation actions that directly benefit wildlife and ...

  Citation × Citation Citation Abstract Copy Title: ODFW Conservation Opportunity Areas Abstract -- Conservation Opportunity Areas were developed for the Comprehensive Wildlife Conservation Strategy to help identify priority areas for conservation actions that directly benefit wildlife and habitats. Title: ODFW Conservation Opportunity Areas Abstract -- Conservation Opportunity Areas were developed for the Comprehensive Wildlife Conservation Strategy to help identify priority areas for conservation actions that directly benefit wildlife and habitats. Close

• 3. [Article] Oregon Conservation Strategy Ecoregions

  Abstract -- Oregon Conservation Strategy ecoregion boundaries are maintained by the Oregon Department of Fish and WIldlife (ODFW), and are used as a geographic organization within the Strategy to prioritize ...

  Citation × Citation Citation Abstract Copy Title: Oregon Conservation Strategy Ecoregions Abstract -- Oregon Conservation Strategy ecoregion boundaries are maintained by the Oregon Department of Fish and WIldlife (ODFW), and are used as a geographic organization within the Strategy to prioritize Strategy Species, Habitats, limiting factors, and recommended approaches. All ecoregions except the Nearshore ecoregion are provided from the Oregon Biodiversity Information Center (ORBIC) March, 2010 ecoregion dataset (which is originally based on US EPA Level III Ecoregions). The Nearshore ecoregion, including the Coast Range/Nearshore boundary, were provided from the Oregon State Boundary dataset, provided via the Oregon GEO Spatial Data Library (with credit provided to BLM). Juristidictional boundaries were used to ensure all of Oregon is divided into appropriate ecoregions, as defined in the revised Oregon Conservation Strategy, and clipped at the Oregon state line. All ecoregion boundaryes are presented at a coarse scale representation , in particular the Nearshore ecoregion, which by definition includes some portions of estuaries and the entire inter-tidal, (or splash) zone. Title: Oregon Conservation Strategy Ecoregions Abstract -- Oregon Conservation Strategy ecoregion boundaries are maintained by the Oregon Department of Fish and WIldlife (ODFW), and are used as a geographic organization within the Strategy to prioritize Strategy Species, Habitats, limiting factors, and recommended approaches. All ecoregions except the Nearshore ecoregion are provided from the Oregon Biodiversity Information Center (ORBIC) March, 2010 ecoregion dataset (which is originally based on US EPA Level III Ecoregions). The Nearshore ecoregion, including the Coast Range/Nearshore boundary, were provided from the Oregon State Boundary dataset, provided via the Oregon GEO Spatial Data Library (with credit provided to BLM). Juristidictional boundaries were used to ensure all of Oregon is divided into appropriate ecoregions, as defined in the revised Oregon Conservation Strategy, and clipped at the Oregon state line. All ecoregion boundaryes are presented at a coarse scale representation , in particular the Nearshore ecoregion, which by definition includes some portions of estuaries and the entire inter-tidal, (or splash) zone. Close

• 4. [Image] A review of scientific information on issues related to the use and management of water resources in the Pacific Northwest

  	Abstract Everest, Fred H.; Stouder, Deanna J.; Kakoyannis, Christina; Houston, Laurie; Stankey, George; Kline, Jeffery; Alig, Ralph. 2004. A review of scientific information ...
  	Citation × Citation Citation Abstract Copy Title: A review of scientific information on issues related to the use and management of water resources in the Pacific Northwest Year: 2004 Abstract Everest, Fred H.; Stouder, Deanna J.; Kakoyannis, Christina; Houston, Laurie; Stankey, George; Kline, Jeffery; Alig, Ralph. 2004. A review of scientific information on issues related to the use and management of water resources in the Pacific Northwest. Gen. Tech. Rep. PNW-GTR-595. Portland, OR: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 128 p. Fresh water is a valuable and essential commodity in the Pacific Northwest States, specifically Oregon, Washington, and Idaho, and one provided abundantly by forested watersheds in the region. The maintenance and growth of industrial, municipal, agricultural, and recreational activities in the region are dependent on adequate and sustainable supplies of fresh water from surface and ground-water sources. Future development, especially in the semiarid intermountain area, depends on the conservation and expansion of the region's water resource. This synthesis reviews the state of our knowledge and condition of water resources in the Pacific Northwest. Keywords: Water distribution, flow regimes, water demand, conflicts, tools, water use. Title: A review of scientific information on issues related to the use and management of water resources in the Pacific Northwest Year: 2004 Abstract Everest, Fred H.; Stouder, Deanna J.; Kakoyannis, Christina; Houston, Laurie; Stankey, George; Kline, Jeffery; Alig, Ralph. 2004. A review of scientific information on issues related to the use and management of water resources in the Pacific Northwest. Gen. Tech. Rep. PNW-GTR-595. Portland, OR: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 128 p. Fresh water is a valuable and essential commodity in the Pacific Northwest States, specifically Oregon, Washington, and Idaho, and one provided abundantly by forested watersheds in the region. The maintenance and growth of industrial, municipal, agricultural, and recreational activities in the region are dependent on adequate and sustainable supplies of fresh water from surface and ground-water sources. Future development, especially in the semiarid intermountain area, depends on the conservation and expansion of the region's water resource. This synthesis reviews the state of our knowledge and condition of water resources in the Pacific Northwest. Keywords: Water distribution, flow regimes, water demand, conflicts, tools, water use. Close

• 5. [Image] Seeking refuge: making space for migratory waterfowl and wetlands along the Pacific Flyway

  	Abstract "Seeking Refuge" examines the history of migratory waterfowl management along the Pacific Flyway, the westernmost of four main migration routes in North America. Drawing on approaches from historical ...
  	Citation × Citation Citation Abstract Copy Title: Seeking refuge: making space for migratory waterfowl and wetlands along the Pacific Flyway Author: Wilson, Robert Michael Year: 2003, 2005, 2004 Abstract "Seeking Refuge" examines the history of migratory waterfowl management along the Pacific Flyway, the westernmost of four main migration routes in North America. Drawing on approaches from historical geography and environmental history, this study shows how wildlife officials developed migratory bird refuges in Oregon and California, where over 60 percent of Pacific Flyway waterfowl winter. During the early-twentieth century, reclamation and river diking eliminated most of the wetlands in the birds' wintering range. Bird enthusiasts such as bird watchers and duck hunters successfully lobbied for the creation of wildlife refuges in a few areas along the flyway. These early refuges failed to protect waterfowl habitat and they were severely degraded by reclamation. In the 1930s and 1940s, the U.S. Fish and Wildlife Service (FWS) and its predecessor, the Bureau of Biological Survey, undertook an ambitious program to resurrect these sanctuaries and to create new ones. Many farmers opposed these refuges out of fear that waterfowl would damage crops. To respond to these concerns and to ensure an adequate food supply for the birds, the FWS raised rice, barley, and other grains. The agency adopted many of the technologies of modern, industrial agriculture including synthetic herbicides and insecticides such as 2, 4-D and DDT. By the 1960s, the refuges had become largely mirrors of the surrounding irrigated farmlands, the main difference being that the FWS raised grain for waterfowl rather than for market. Refuges could not escape the agricultural settings in which they were embedded. As units within the irrigated countryside, Pacific Flyway refuges were often at the mercy of nearby farmers and federal reclamation agencies. Poor water quality and insufficient supplies of water often hampered FWS efforts to manage refuges. In the late-twentieth century, reduced water supply due to diversions to California municipalities and to sustain endangered fish species affected the amount of water reaching refuges. This dissertation has other goals. First, it critiques the anthropocentrism of most historical geography by focusing on how political, cultural, and ecological factors affected wildlife. Second, it contributes to the literature on the state's role in environmental protection by investigating the overlapping, and often contradictory, spaces within which wildlife managers implemented environmental regulations. Title: Seeking refuge: making space for migratory waterfowl and wetlands along the Pacific Flyway Author: Wilson, Robert Michael Year: 2003, 2005, 2004 Abstract "Seeking Refuge" examines the history of migratory waterfowl management along the Pacific Flyway, the westernmost of four main migration routes in North America. Drawing on approaches from historical geography and environmental history, this study shows how wildlife officials developed migratory bird refuges in Oregon and California, where over 60 percent of Pacific Flyway waterfowl winter. During the early-twentieth century, reclamation and river diking eliminated most of the wetlands in the birds' wintering range. Bird enthusiasts such as bird watchers and duck hunters successfully lobbied for the creation of wildlife refuges in a few areas along the flyway. These early refuges failed to protect waterfowl habitat and they were severely degraded by reclamation. In the 1930s and 1940s, the U.S. Fish and Wildlife Service (FWS) and its predecessor, the Bureau of Biological Survey, undertook an ambitious program to resurrect these sanctuaries and to create new ones. Many farmers opposed these refuges out of fear that waterfowl would damage crops. To respond to these concerns and to ensure an adequate food supply for the birds, the FWS raised rice, barley, and other grains. The agency adopted many of the technologies of modern, industrial agriculture including synthetic herbicides and insecticides such as 2, 4-D and DDT. By the 1960s, the refuges had become largely mirrors of the surrounding irrigated farmlands, the main difference being that the FWS raised grain for waterfowl rather than for market. Refuges could not escape the agricultural settings in which they were embedded. As units within the irrigated countryside, Pacific Flyway refuges were often at the mercy of nearby farmers and federal reclamation agencies. Poor water quality and insufficient supplies of water often hampered FWS efforts to manage refuges. In the late-twentieth century, reduced water supply due to diversions to California municipalities and to sustain endangered fish species affected the amount of water reaching refuges. This dissertation has other goals. First, it critiques the anthropocentrism of most historical geography by focusing on how political, cultural, and ecological factors affected wildlife. Second, it contributes to the literature on the state's role in environmental protection by investigating the overlapping, and often contradictory, spaces within which wildlife managers implemented environmental regulations. Close

• 6. [Image] A strategy for achieving healthy watersheds in Oregon

  	"January 2001."
  	Citation × Citation Citation Abstract Copy Title: A strategy for achieving healthy watersheds in Oregon Author: Oregon Watershed Enhancement Board Year: 2001, 2004 "January 2001." Title: A strategy for achieving healthy watersheds in Oregon Author: Oregon Watershed Enhancement Board Year: 2001, 2004 "January 2001." Close

• 7. [Image] Research information needs on terrestrial vertebrate species of the interior Columbia River basin and northern portions of the Klamath and Great basins: research, development, and application database

  	"September 1997"; Includes bibliographical references (p. 24)
  	Citation × Citation Citation Abstract Copy Title: Research information needs on terrestrial vertebrate species of the interior Columbia River basin and northern portions of the Klamath and Great basins: research, development, and application database Author: Marcot, Bruce G. Year: 1997, 2005, 2004 "September 1997"; Includes bibliographical references (p. 24) Title: Research information needs on terrestrial vertebrate species of the interior Columbia River basin and northern portions of the Klamath and Great basins: research, development, and application database Author: Marcot, Bruce G. Year: 1997, 2005, 2004 "September 1997"; Includes bibliographical references (p. 24) Close

• 8. [Image] An examination of the Klamath Basin crisis : restructuring the discourse within an identity-based framework

  	Thesis (B.A.) -- Whitman College, 2002; Includes bibliographical references (leaves 79-83)
  	Citation × Citation Citation Abstract Copy Title: An examination of the Klamath Basin crisis : restructuring the discourse within an identity-based framework Author: Dornsife, Alison M. Year: 2002, 2005, 2004 Thesis (B.A.) -- Whitman College, 2002; Includes bibliographical references (leaves 79-83) Title: An examination of the Klamath Basin crisis : restructuring the discourse within an identity-based framework Author: Dornsife, Alison M. Year: 2002, 2005, 2004 Thesis (B.A.) -- Whitman College, 2002; Includes bibliographical references (leaves 79-83) Close

• 9. [Image] The South Portal Project : creating a sense of arrival

  	"Holistic planning for Lake Ewauna & the south entry to the City of Klamath Falls"
  	Citation × Citation Citation Abstract Copy Title: The South Portal Project : creating a sense of arrival Author: Carpenter Design, Inc. Year: 2005 "Holistic planning for Lake Ewauna & the south entry to the City of Klamath Falls" Title: The South Portal Project : creating a sense of arrival Author: Carpenter Design, Inc. Year: 2005 "Holistic planning for Lake Ewauna & the south entry to the City of Klamath Falls" Close

• 10. [Image] Klamath Falls Resource Area resource management plan and environmental impact statement : final : Volume 3

  	Proposed resource management plan/final environmental impact statement for the Klamath Falls Resource Area
  	Citation × Citation Citation Abstract Copy Title: Klamath Falls Resource Area resource management plan and environmental impact statement : final : Volume 3 Author: United States. Bureau of Land Management. Klamath Falls Resource Area Office Year: 1994, 2005 Proposed resource management plan/final environmental impact statement for the Klamath Falls Resource Area Title: Klamath Falls Resource Area resource management plan and environmental impact statement : final : Volume 3 Author: United States. Bureau of Land Management. Klamath Falls Resource Area Office Year: 1994, 2005 Proposed resource management plan/final environmental impact statement for the Klamath Falls Resource Area Close

• 11. [Image] Integrated scientific assessment for ecosystem management in the interior Columbia Basin and portions of the Klamath and Great Basins

  	Abstract Quigley, Thomas M.; Haynes, Richard W.; Graham, Russell T., tech. eds. 1996. Integrated scientific assessment for ecosystem management in the interior Columbia basin and portions of the Klamath ...
  	Citation × Citation Citation Abstract Copy Title: Integrated scientific assessment for ecosystem management in the interior Columbia Basin and portions of the Klamath and Great Basins Year: 1996, 2005, 2000 Abstract Quigley, Thomas M.; Haynes, Richard W.; Graham, Russell T., tech. eds. 1996. Integrated scientific assessment for ecosystem management in the interior Columbia basin and portions of the Klamath and Great Basins. Gen. Tech. Rep. PNW-GTR-382. Portland, OR: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 303 p. (Quigley, Thomas M., tech. ed. The Interior Columbia Basin Ecosystem Management Project: Scientific Assessment.) The Integrated Scientific Assessment for Ecosystem Management for the Interior Columbia Basin links landscape, aquatic, terrestrial, social, and economic characterizations to describe biophysical and social systems. Integration was achieved through a framework built around six goals for ecosystem management and three different views of the future. These goals are: maintain evolutionary and ecological processes; manage for multiple ecological domains and evolutionary timeframes; maintain viable populations of native and desired non-native species; encourage social and economic resiliency; manage for places with definable values; and, manage to maintain a variety of ecosystem goods, services, and conditions that society wants. Ratings of relative ecological integrity and socioeconomic resiliency were used to make broad statements about ecosystem conditions in the Basin. Currently in the Basin high integrity and resiliency are found on 16 and 20 percent of the area, respectively. Low integrity and resiliency are found on 60 and 68 percent of the area. Different approaches to management can alter the risks to the assets of people living in the Basin and to the ecosystem itself. Continuation of current management leads to increasing risks while management approaches focusing on reserves or restoration result in trends that mostly stabilize or reduce risks. Even where ecological integrity is projected to improve with the application of active management, population increases and the pressures of expanding demands on resources may cause increasing trends in risk. Keywords: Ecosystem assessment, management and goals; ecological integrity; socio-economic resiliency; risk management Title: Integrated scientific assessment for ecosystem management in the interior Columbia Basin and portions of the Klamath and Great Basins Year: 1996, 2005, 2000 Abstract Quigley, Thomas M.; Haynes, Richard W.; Graham, Russell T., tech. eds. 1996. Integrated scientific assessment for ecosystem management in the interior Columbia basin and portions of the Klamath and Great Basins. Gen. Tech. Rep. PNW-GTR-382. Portland, OR: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 303 p. (Quigley, Thomas M., tech. ed. The Interior Columbia Basin Ecosystem Management Project: Scientific Assessment.) The Integrated Scientific Assessment for Ecosystem Management for the Interior Columbia Basin links landscape, aquatic, terrestrial, social, and economic characterizations to describe biophysical and social systems. Integration was achieved through a framework built around six goals for ecosystem management and three different views of the future. These goals are: maintain evolutionary and ecological processes; manage for multiple ecological domains and evolutionary timeframes; maintain viable populations of native and desired non-native species; encourage social and economic resiliency; manage for places with definable values; and, manage to maintain a variety of ecosystem goods, services, and conditions that society wants. Ratings of relative ecological integrity and socioeconomic resiliency were used to make broad statements about ecosystem conditions in the Basin. Currently in the Basin high integrity and resiliency are found on 16 and 20 percent of the area, respectively. Low integrity and resiliency are found on 60 and 68 percent of the area. Different approaches to management can alter the risks to the assets of people living in the Basin and to the ecosystem itself. Continuation of current management leads to increasing risks while management approaches focusing on reserves or restoration result in trends that mostly stabilize or reduce risks. Even where ecological integrity is projected to improve with the application of active management, population increases and the pressures of expanding demands on resources may cause increasing trends in risk. Keywords: Ecosystem assessment, management and goals; ecological integrity; socio-economic resiliency; risk management Close

• 12. [Image] A framework for ecosystem management in the interior Columbia Basin and portions of the Klamath and Great Basins

  	Haynes, Richard W.; Graham, Russell T.; Quigley, Thomas M., tech. eds. 1996. A framework for ecosystem management in the Interior Columbia Basin including portions of the Klamath and Great Basins. Gen. ...
  	Citation × Citation Citation Abstract Copy Title: A framework for ecosystem management in the interior Columbia Basin and portions of the Klamath and Great Basins Year: 1996, 2005 Haynes, Richard W.; Graham, Russell T.; Quigley, Thomas M., tech. eds. 1996. A framework for ecosystem management in the Interior Columbia Basin including portions of the Klamath and Great Basins. Gen. Tech. Rep. PNW-GTR-374. Portland, OR; U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 66 p. A framework for ecosystem management is proposed. This framework assumes the purpose of ecosystem management is to maintain the integrity of ecosystems over time and space. It is based on four ecosystem principles: ecosystems are dynamic, can be viewed as hierarchies with temporal and spatial dimensions, have limits, and are relatively unpredictable. This approach recognizes that people are part of ecosystems and that stewardship must be able to resolve tough challenges including how to meet multiple demands with finite resources. The framework describes a general planning model for ecosystem management that has four iterative steps: monitoring, assessment, decision-making, and implementation. Since ecosystems cross jurisdictional lines, the implementation of the framework depends on partnerships among land managers, the scientific community, and stakeholders. It proposes that decision-making be based on information provided by the best available science and the most appropriate technologies for land management. Keywords: Ecosystem assessment, ecosystem principles, ecosystem management, planning models, management goals, risk analysis. Title: A framework for ecosystem management in the interior Columbia Basin and portions of the Klamath and Great Basins Year: 1996, 2005 Haynes, Richard W.; Graham, Russell T.; Quigley, Thomas M., tech. eds. 1996. A framework for ecosystem management in the Interior Columbia Basin including portions of the Klamath and Great Basins. Gen. Tech. Rep. PNW-GTR-374. Portland, OR; U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 66 p. A framework for ecosystem management is proposed. This framework assumes the purpose of ecosystem management is to maintain the integrity of ecosystems over time and space. It is based on four ecosystem principles: ecosystems are dynamic, can be viewed as hierarchies with temporal and spatial dimensions, have limits, and are relatively unpredictable. This approach recognizes that people are part of ecosystems and that stewardship must be able to resolve tough challenges including how to meet multiple demands with finite resources. The framework describes a general planning model for ecosystem management that has four iterative steps: monitoring, assessment, decision-making, and implementation. Since ecosystems cross jurisdictional lines, the implementation of the framework depends on partnerships among land managers, the scientific community, and stakeholders. It proposes that decision-making be based on information provided by the best available science and the most appropriate technologies for land management. Keywords: Ecosystem assessment, ecosystem principles, ecosystem management, planning models, management goals, risk analysis. Close

• 13. [Image] Review of the hatchery measures in the Oregon plan for salmon and watersheds. Part I, Consistency of the Oregon plan with recommendations from recent scientific review panels

  	"December 10, 1998."
  	Citation × Citation Citation Abstract Copy Title: Review of the hatchery measures in the Oregon plan for salmon and watersheds. Part I, Consistency of the Oregon plan with recommendations from recent scientific review panels Author: Independent Multidisciplinary Science Team (Or.) Year: 1998, 2005 "December 10, 1998." Title: Review of the hatchery measures in the Oregon plan for salmon and watersheds. Part I, Consistency of the Oregon plan with recommendations from recent scientific review panels Author: Independent Multidisciplinary Science Team (Or.) Year: 1998, 2005 "December 10, 1998." Close

• 14. [Image] Oregon lampreys : natural history, status, and analysis of management issues

  	Executive Summary The jawless lampreys are remnants of the oldest vertebrates in the world. Oregon has somewhere between eight and a dozen species of these primitive fishes. Their taxonomy is obscure ...
  	Citation × Citation Citation Abstract Copy Title: Oregon lampreys : natural history, status, and analysis of management issues Author: Kostow, Kathryn Year: 2002, 2008, 2005 Executive Summary The jawless lampreys are remnants of the oldest vertebrates in the world. Oregon has somewhere between eight and a dozen species of these primitive fishes. Their taxonomy is obscure because different species tend to look very similar through most of their life cycle, and they have not been well-studied in Oregon. Lampreys occur in the Columbia Basin, including the lower Snake River, along the Oregon coast, in the upper Klamath Basin, and in Goose Lake Basin in southeastern Oregon. They all begin life in fresh water where juveniles burrow into silt and filter feed on algae. As some species approach adulthood they migrate to the ocean or to lakes where they briefly become ecto-parasites, feeding on other live fishes by attaching to them with sucker disc mouths. Other species remain non-parasitic. In addition to some enigmatic species identities, we generally have very little information about the detailed distributions, life histories and basic biology of lampreys. Lampreys became a conservation concern in the early 1990s when tribal co-managers and some Oregon Department of Fish and Wildlife (ODFW) staff noted that populations of Pacific Lampreys, Lampetra tridentata, were apparently declining to perilously low numbers. Pacific Lampreys were listed as an Oregon State sensitive species in 1993 and were given further legal protected status by the state in 1997 (OAR 635-044-0130). Lamprey status is difficult to assess for several reasons: 1) Most observations of lampreys in fresh water are of juveniles and it is difficult to tell the various species apart, even to the extent that the various species are currently clearly designated; 2) Data on lamprey is only collected incidental to monitoring of salmonids. The design and efficiency of the data collection effort is not always adequate for lampreys; and 3) We have very few historic data sets for lampreys. Therefore we often cannot determine how the abundances and distributions we see now compare with those in the past. The limited data that we have suggests that lampreys have declined through many parts of their ranges. The most precipitous declines appear to be in the upper Columbia and Snake basins where we have some historic data from mainstem dam counts. Pacific Lampreys have declined to only about 200 adults annually passing the Snake River dams. We also have evidence of declines of Pacific Lampreys in the lower Columbia and on the Oregon coast, although our data is quite limited. We have little to no information about any of the other species of lampreys. We are not even sure whether some of the recognized species, like the River Lamprey (L. ayresi), is still present in Oregon. This paper concludes with a Problem Analysis for Oregon lampreys. Our biggest problem is poor information, ranging from not knowing basic species identity to having inefficient or no systematic monitoring of lamprey abundance and distribution. ODFW continued an annual harvest on Pacific Lamprey in the Willamette Basin in 2001, but we lack the necessary information to assess the affects of the harvest on the population. Major habitat problems that affect lampreys include upstream passage over artificial barriers, a need for lamprey-friendly screening of water diversions, and urban and agricultural development of low-gradient flood plain habitats. Title: Oregon lampreys : natural history, status, and analysis of management issues Author: Kostow, Kathryn Year: 2002, 2008, 2005 Executive Summary The jawless lampreys are remnants of the oldest vertebrates in the world. Oregon has somewhere between eight and a dozen species of these primitive fishes. Their taxonomy is obscure because different species tend to look very similar through most of their life cycle, and they have not been well-studied in Oregon. Lampreys occur in the Columbia Basin, including the lower Snake River, along the Oregon coast, in the upper Klamath Basin, and in Goose Lake Basin in southeastern Oregon. They all begin life in fresh water where juveniles burrow into silt and filter feed on algae. As some species approach adulthood they migrate to the ocean or to lakes where they briefly become ecto-parasites, feeding on other live fishes by attaching to them with sucker disc mouths. Other species remain non-parasitic. In addition to some enigmatic species identities, we generally have very little information about the detailed distributions, life histories and basic biology of lampreys. Lampreys became a conservation concern in the early 1990s when tribal co-managers and some Oregon Department of Fish and Wildlife (ODFW) staff noted that populations of Pacific Lampreys, Lampetra tridentata, were apparently declining to perilously low numbers. Pacific Lampreys were listed as an Oregon State sensitive species in 1993 and were given further legal protected status by the state in 1997 (OAR 635-044-0130). Lamprey status is difficult to assess for several reasons: 1) Most observations of lampreys in fresh water are of juveniles and it is difficult to tell the various species apart, even to the extent that the various species are currently clearly designated; 2) Data on lamprey is only collected incidental to monitoring of salmonids. The design and efficiency of the data collection effort is not always adequate for lampreys; and 3) We have very few historic data sets for lampreys. Therefore we often cannot determine how the abundances and distributions we see now compare with those in the past. The limited data that we have suggests that lampreys have declined through many parts of their ranges. The most precipitous declines appear to be in the upper Columbia and Snake basins where we have some historic data from mainstem dam counts. Pacific Lampreys have declined to only about 200 adults annually passing the Snake River dams. We also have evidence of declines of Pacific Lampreys in the lower Columbia and on the Oregon coast, although our data is quite limited. We have little to no information about any of the other species of lampreys. We are not even sure whether some of the recognized species, like the River Lamprey (L. ayresi), is still present in Oregon. This paper concludes with a Problem Analysis for Oregon lampreys. Our biggest problem is poor information, ranging from not knowing basic species identity to having inefficient or no systematic monitoring of lamprey abundance and distribution. ODFW continued an annual harvest on Pacific Lamprey in the Willamette Basin in 2001, but we lack the necessary information to assess the affects of the harvest on the population. Major habitat problems that affect lampreys include upstream passage over artificial barriers, a need for lamprey-friendly screening of water diversions, and urban and agricultural development of low-gradient flood plain habitats. Close

• 15. [Image] The Endangered Species Act (ESA) in the 109th Congress conflicting values and difficult choices

  	IB10144 04-22-05 The Endangered Species Act (ESA) in the 109th Congress: Conflicting Values and Difficult Choices SUMMARY The 109th Congress is likely to consider various proposals to amend the ...
  	Citation × Citation Citation Abstract Copy Title: The Endangered Species Act (ESA) in the 109th Congress conflicting values and difficult choices Author: Buck, Eugene H Year: 2006, 2008, 2005 IB10144 04-22-05 The Endangered Species Act (ESA) in the 109th Congress: Conflicting Values and Difficult Choices SUMMARY The 109th Congress is likely to consider various proposals to amend the Endangered Species Act of 1973 (ESA; P.L. 93-205; 16 U.S.C. ??1531-1543 ). Major issues in recent years have included changing the role of science in decision-making, modifying critical habitat procedures, reducing conflicts with Department of Defense activities, incorporating further protection and incentives for property owners, and increasing protection of listed species, among others. In addition, many have advocated enacting as law some ESA regulations promulgated during the Clinton Administration. The ESA has been one of the more contentious environmental laws. This may stem from its strict substantive provisions, which can affect the use of both federal and non-federal lands and resources. Under the ESA, species of plants and animals (both vertebrate and invertebrate) can be listed as endangered or threatened according to assessments of their risk of extinction. Once a species is listed, powerful legal tools are available to aid its recovery and protect its habitat. The ESA may also be controversial because dwindling species are usually harbingers of broader ecosystem decline: the most common cause of listing species is habitat loss. The authorization for spending under the ESA expired on October 1, 1992. The prohibitions and requirements of the ESA remain in force, even in the absence of an authorization, and funds have been appropriated to implement the administrative provisions of the ESA in each subsequent fiscal year. In the 108th Congress, two bills were reported by the House Committee on Resources, but not enacted, that would have amended the ESA to modify scientific peer review and critical habitat procedures. Interior appropriations measures funded Fish and Wildlife Service programs related to endangered species (P.L. 108-108 provided $265 million for FY2004; P.L. 108-447 provided $262 million for FY2005). P.L. 108-136 (Defense authorization) included an ESA amendment to direct that critical habitat not be designated on military lands under certain conditions when Integrated Natural Resources Management Plans are in effect. P.L. 108-137 (Energy and Water appropriations) prohibited use of FY2004 or earlier funds to reduce water deliveries under existing contracts for ESA compliance for the silvery minnow on the Middle Rio Grande River unless water is obtained from a willing seller or lessor; this prohibition appears to have been made permanent by ?205 of Div. C of P.L. 108-447. P.L. 108-148 (Healthy Forests Act) authorized hazardous fuels reduction projects on BLM and national forest lands, including those containing habitat for listed species; directed establishment of a healthy forests reserve program to promote recovery of listed species; and directed the Secretary of the Interior to provide property rights assurances to landowners enrolled in the healthy forests reserve program. Congressional Research Service ? The Library of Congress CRS Title: The Endangered Species Act (ESA) in the 109th Congress conflicting values and difficult choices Author: Buck, Eugene H Year: 2006, 2008, 2005 IB10144 04-22-05 The Endangered Species Act (ESA) in the 109th Congress: Conflicting Values and Difficult Choices SUMMARY The 109th Congress is likely to consider various proposals to amend the Endangered Species Act of 1973 (ESA; P.L. 93-205; 16 U.S.C. ??1531-1543 ). Major issues in recent years have included changing the role of science in decision-making, modifying critical habitat procedures, reducing conflicts with Department of Defense activities, incorporating further protection and incentives for property owners, and increasing protection of listed species, among others. In addition, many have advocated enacting as law some ESA regulations promulgated during the Clinton Administration. The ESA has been one of the more contentious environmental laws. This may stem from its strict substantive provisions, which can affect the use of both federal and non-federal lands and resources. Under the ESA, species of plants and animals (both vertebrate and invertebrate) can be listed as endangered or threatened according to assessments of their risk of extinction. Once a species is listed, powerful legal tools are available to aid its recovery and protect its habitat. The ESA may also be controversial because dwindling species are usually harbingers of broader ecosystem decline: the most common cause of listing species is habitat loss. The authorization for spending under the ESA expired on October 1, 1992. The prohibitions and requirements of the ESA remain in force, even in the absence of an authorization, and funds have been appropriated to implement the administrative provisions of the ESA in each subsequent fiscal year. In the 108th Congress, two bills were reported by the House Committee on Resources, but not enacted, that would have amended the ESA to modify scientific peer review and critical habitat procedures. Interior appropriations measures funded Fish and Wildlife Service programs related to endangered species (P.L. 108-108 provided $265 million for FY2004; P.L. 108-447 provided $262 million for FY2005). P.L. 108-136 (Defense authorization) included an ESA amendment to direct that critical habitat not be designated on military lands under certain conditions when Integrated Natural Resources Management Plans are in effect. P.L. 108-137 (Energy and Water appropriations) prohibited use of FY2004 or earlier funds to reduce water deliveries under existing contracts for ESA compliance for the silvery minnow on the Middle Rio Grande River unless water is obtained from a willing seller or lessor; this prohibition appears to have been made permanent by ?205 of Div. C of P.L. 108-447. P.L. 108-148 (Healthy Forests Act) authorized hazardous fuels reduction projects on BLM and national forest lands, including those containing habitat for listed species; directed establishment of a healthy forests reserve program to promote recovery of listed species; and directed the Secretary of the Interior to provide property rights assurances to landowners enrolled in the healthy forests reserve program. Congressional Research Service ? The Library of Congress CRS Close

• 16. [Image] Endangered species: difficult choices

  	IB10072 08-26-04 Endangered Species: Difficult Choices SUMMARY The 108th Congress is considering various proposals to amend the Endangered Species Act of 1973 (ESA). Major issues in recent years ...
  	Citation × Citation Citation Abstract Copy Title: Endangered species: difficult choices Author: Buck, Eugene H; Corn, M. Lynne (Mary Lynne), 1946-; Baldwin, Pamela Year: 2004, 2008, 2005 IB10072 08-26-04 Endangered Species: Difficult Choices SUMMARY The 108th Congress is considering various proposals to amend the Endangered Species Act of 1973 (ESA). Major issues in recent years have included changing the role of science in decision-making, changing the role of critical habitat, reducing conflicts with Department of Defense activities, incorporating further protection for property owners, and increasing protection of listed species, among others. In addition, many have advocated including significant changes to ESA regulations made during the Clinton Administration in the law itself. The ESA has been one of the more contentious environmental laws. This may stem from its strict substantive provisions, which can affect the use of both federal and non-federal lands and resources. Under the ESA, certain species of plants and animals (both vertebrate and invertebrate) are listed as "endangered" or "threatened" according to assessments of their risk of extinction. Once a species is listed, powerful legal tools are available to aid its recovery and protect its habitat. The ESA may also be controversial because dwindling species are usually harbingers of resource scarcity: the most common cause of listing species is habitat loss. Recent efforts in the House would modify ESA provisions that designate critical habitat, and that provide for scientific peer review. The authorization for spending under the ESA expired on October 1, 1992. The prohibitions and requirements of the ESA remain in force, even in the absence of an authorization, and funds have been appropriated to imple- ment the administrative provisions of the ESA in each subsequent fiscal year. In the 108th Congress, two bills (H.R. 1662 and H.R. 2933) have been reported that would, respectively, address issues concerning scientific peer review and critical habitat. These bills may be brought to the House floor in September. Earlier, P.L. 108-108 (Interior appropriations) provided $265 million for FY2004 for programs related to endangered species. P.L. 108-136 (Defense authorization) included an ESA amendment to direct that critical habitat not be designated on military lands under certain conditions when Integrated Natural Resources Management Plans are in effect. P.L. 108-137 (Energy and Water appropriations) prohibited use of FY2004 or earlier funds to reduce water deliveries under existing contracts for ESA compliance for the silvery minnow on the Middle Rio Grande River unless water is obtained from a willing seller or lessor. The act also established an executive committee to oversee the Collaborative Program associated with this situation. P.L. 108-148 (Healthy Forests Act) authorized hazardous fuels reduction projects on BLM and national forest lands including those containing listed species habitat; directed establishment of a healthy forests reserve program to promote recovery of listed species; and directed the Secretary of the Interior to provide assurances to landowners whose enrollment in the healthy forests reserve program results in new conservation benefits for ESA-listed species. Title: Endangered species: difficult choices Author: Buck, Eugene H; Corn, M. Lynne (Mary Lynne), 1946-; Baldwin, Pamela Year: 2004, 2008, 2005 IB10072 08-26-04 Endangered Species: Difficult Choices SUMMARY The 108th Congress is considering various proposals to amend the Endangered Species Act of 1973 (ESA). Major issues in recent years have included changing the role of science in decision-making, changing the role of critical habitat, reducing conflicts with Department of Defense activities, incorporating further protection for property owners, and increasing protection of listed species, among others. In addition, many have advocated including significant changes to ESA regulations made during the Clinton Administration in the law itself. The ESA has been one of the more contentious environmental laws. This may stem from its strict substantive provisions, which can affect the use of both federal and non-federal lands and resources. Under the ESA, certain species of plants and animals (both vertebrate and invertebrate) are listed as "endangered" or "threatened" according to assessments of their risk of extinction. Once a species is listed, powerful legal tools are available to aid its recovery and protect its habitat. The ESA may also be controversial because dwindling species are usually harbingers of resource scarcity: the most common cause of listing species is habitat loss. Recent efforts in the House would modify ESA provisions that designate critical habitat, and that provide for scientific peer review. The authorization for spending under the ESA expired on October 1, 1992. The prohibitions and requirements of the ESA remain in force, even in the absence of an authorization, and funds have been appropriated to imple- ment the administrative provisions of the ESA in each subsequent fiscal year. In the 108th Congress, two bills (H.R. 1662 and H.R. 2933) have been reported that would, respectively, address issues concerning scientific peer review and critical habitat. These bills may be brought to the House floor in September. Earlier, P.L. 108-108 (Interior appropriations) provided $265 million for FY2004 for programs related to endangered species. P.L. 108-136 (Defense authorization) included an ESA amendment to direct that critical habitat not be designated on military lands under certain conditions when Integrated Natural Resources Management Plans are in effect. P.L. 108-137 (Energy and Water appropriations) prohibited use of FY2004 or earlier funds to reduce water deliveries under existing contracts for ESA compliance for the silvery minnow on the Middle Rio Grande River unless water is obtained from a willing seller or lessor. The act also established an executive committee to oversee the Collaborative Program associated with this situation. P.L. 108-148 (Healthy Forests Act) authorized hazardous fuels reduction projects on BLM and national forest lands including those containing listed species habitat; directed establishment of a healthy forests reserve program to promote recovery of listed species; and directed the Secretary of the Interior to provide assurances to landowners whose enrollment in the healthy forests reserve program results in new conservation benefits for ESA-listed species. Close

• 17. [Image] Final supplemental environmental impact statement: for clarification of language in the 1994 record of decision for the Northwest Forest Plan; national forests and Bureau of Land Management districts within the range of the northern spotted owl: proposal to amend wording about the aquatic conservation strategy

  	Abstract The Secretaries of Agriculture and the Interior propose limited changes to language about how to demonstrate that projects follow the Aquatic Conservation Strategy, part of the Northwest Forest ...
  	Citation × Citation Citation Abstract Copy Title: Final supplemental environmental impact statement: for clarification of language in the 1994 record of decision for the Northwest Forest Plan; national forests and Bureau of Land Management districts within the range of the northern spotted owl: proposal to amend wording about the aquatic conservation strategy Author: United States. Department of Agriculture. Forest Service; United States. Department of the Interior. Bureau of Land Managemen Year: 2003, 2006, 2005 Abstract The Secretaries of Agriculture and the Interior propose limited changes to language about how to demonstrate that projects follow the Aquatic Conservation Strategy, part of the Northwest Forest Plan. Projects needed to achieve Northwest Forest Plan goals have been delayed or stopped due to misapplication of certain passages in the Aquatic Conservation Strategy. The agencies are responding to the underlying need for increased agency success planning and implementing projects, to the extent that the current wording has hindered the agencies ability to follow Northwest Forest Plan principles and achieve its goals. The goals of the Northwest Forest Plan cannot be achieved without project implementation. Three alternatives are considered in the Final Supplemental Environmental Impact Statement, No Action, the Proposed Action, and Alternative A. No Action would not change existing language within the Aquatic Conservation Strategy. The Proposed Action and Alternative A would make l Title: Final supplemental environmental impact statement: for clarification of language in the 1994 record of decision for the Northwest Forest Plan; national forests and Bureau of Land Management districts within the range of the northern spotted owl: proposal to amend wording about the aquatic conservation strategy Author: United States. Department of Agriculture. Forest Service; United States. Department of the Interior. Bureau of Land Managemen Year: 2003, 2006, 2005 Abstract The Secretaries of Agriculture and the Interior propose limited changes to language about how to demonstrate that projects follow the Aquatic Conservation Strategy, part of the Northwest Forest Plan. Projects needed to achieve Northwest Forest Plan goals have been delayed or stopped due to misapplication of certain passages in the Aquatic Conservation Strategy. The agencies are responding to the underlying need for increased agency success planning and implementing projects, to the extent that the current wording has hindered the agencies ability to follow Northwest Forest Plan principles and achieve its goals. The goals of the Northwest Forest Plan cannot be achieved without project implementation. Three alternatives are considered in the Final Supplemental Environmental Impact Statement, No Action, the Proposed Action, and Alternative A. No Action would not change existing language within the Aquatic Conservation Strategy. The Proposed Action and Alternative A would make l Close

• 18. [Image] Macroecology, paleoecology, and ecological integrity of terrestrial species and communities of the interior Columbia River basin and northern portions of the Klamath and Great Basins

  	This report presents information on biogeography and broad-scale ecology (macroecology) of selected fungi, lichens, bryophytes, vascular plants, invertebrates, and vertebrates of the interior Columbia ...
  	Citation × Citation Citation Abstract Copy Title: Macroecology, paleoecology, and ecological integrity of terrestrial species and communities of the interior Columbia River basin and northern portions of the Klamath and Great Basins Author: U.S. Department of Agriculture. Forest Service. Pacific Northwest Research Station; U.S.Department of the Interior. Bureau of Land Management. Year: 1998, 2006, 2005 This report presents information on biogeography and broad-scale ecology (macroecology) of selected fungi, lichens, bryophytes, vascular plants, invertebrates, and vertebrates of the interior Columbia River basin and adjacent areas. Rare plants include many endemics associated with local conditions. Potential plant and invertebrate bioindicators are identified. Species ecological functions differ among communities and variously affect ecosystem diversity and productivity. Species of alpine and subalpine communities are identified that may be at risk from climate change. Maps of terrestrial ecological integrity are presented. Keywords: Macroecology, paleoecology, ecological integrity, terrestrial communities, ecosystems, wildlife, fungi, lichens, bryophytes, vascular plants, invertebrates, arthropods, mollusks, amphibians, reptiles, birds, mammals, endemism, interior Columbia River basin, Klamath Basin, Great Basin. Title: Macroecology, paleoecology, and ecological integrity of terrestrial species and communities of the interior Columbia River basin and northern portions of the Klamath and Great Basins Author: U.S. Department of Agriculture. Forest Service. Pacific Northwest Research Station; U.S.Department of the Interior. Bureau of Land Management. Year: 1998, 2006, 2005 This report presents information on biogeography and broad-scale ecology (macroecology) of selected fungi, lichens, bryophytes, vascular plants, invertebrates, and vertebrates of the interior Columbia River basin and adjacent areas. Rare plants include many endemics associated with local conditions. Potential plant and invertebrate bioindicators are identified. Species ecological functions differ among communities and variously affect ecosystem diversity and productivity. Species of alpine and subalpine communities are identified that may be at risk from climate change. Maps of terrestrial ecological integrity are presented. Keywords: Macroecology, paleoecology, ecological integrity, terrestrial communities, ecosystems, wildlife, fungi, lichens, bryophytes, vascular plants, invertebrates, arthropods, mollusks, amphibians, reptiles, birds, mammals, endemism, interior Columbia River basin, Klamath Basin, Great Basin. Close

• 19. [Image] Making the ESA work better: implementing the 10 point plan - and beyond

  	19p.; ill.; Cover title; "June 1997"; "Reprint September 1998"; [Washington, D.C.]: Supt. of Docs., U.S. G.P.O., 1999
  	Citation × Citation Citation Abstract Copy Title: Making the ESA work better: implementing the 10 point plan - and beyond Year: 1998, 2006, 2005 19p.; ill.; Cover title; "June 1997"; "Reprint September 1998"; [Washington, D.C.]: Supt. of Docs., U.S. G.P.O., 1999 Title: Making the ESA work better: implementing the 10 point plan - and beyond Year: 1998, 2006, 2005 19p.; ill.; Cover title; "June 1997"; "Reprint September 1998"; [Washington, D.C.]: Supt. of Docs., U.S. G.P.O., 1999 Close

• 20. [Image] Recovery strategy for California Coho salmon : report to the California Fish and Game Commission

  	"February 2004."
  	Citation × Citation Citation Abstract Copy Title: Recovery strategy for California Coho salmon : report to the California Fish and Game Commission Author: California. Dept. of Fish and Game Year: 2004, 2005 "February 2004." Title: Recovery strategy for California Coho salmon : report to the California Fish and Game Commission Author: California. Dept. of Fish and Game Year: 2004, 2005 "February 2004." Close

• 21. [Image] Implementation of the Endangered Species Act of 1973 (Report to the House Committee on Resources)

  	I. Executive Summary There is increasing recognition from most quarters that the Endangered Species Act (ESA) needs to be improved. Exactly what those improvements should be is less uniform. ...
  	Citation × Citation Citation Abstract Copy Title: Implementation of the Endangered Species Act of 1973 (Report to the House Committee on Resources) Author: United States. Congress. House. Committee on Resources Year: 2005, 2007 I. Executive Summary There is increasing recognition from most quarters that the Endangered Species Act (ESA) needs to be improved. Exactly what those improvements should be is less uniform. This report examines the implementation of selected aspects of the endangered species program relying predominately on information provided by the primary implementing agencies, the United States Fish and Wildlife Service (FWS) and National Marine Fisheries Service (NMFS) and offers some recommendations for possible improvements to the program. Debate over the ESA has traditionally been highly polarized. For example, compensating landowners for takings or reductions in property value has been opposed by some who argue updating the law to address this is not necessary. While consensus on other issues such as the need for increasing conservation incentives and the role states play in endangered species conservation has begun to emerge, one of the most debated aspects of ESA implementation continues to be whether the ESA is effectively conserving endangered and threatened species. While there have been significant strides in conserving individual species such as the whooping crane, red-cockaded woodpecker and gray wolf, few species have been delisted (removed from the endangered list) or downlisted (changed in status from endangered to threatened) because of successful ESA conservation efforts. Some argue that the number of recovered species is an unfair measure, asserting that the three decades the ESA has been in existence is an insufficient amount of time for the lengthy process of species recovery and point to listed species that have not gone extinct as evidence the ESA 'saves' species. From the opposing perspective, while recovery to the point of delisting may require a substantial amount of time for many species, after three decades more progress should be demonstrable through species that have recovered and been delisted. Even if a species has increased in numbers or distribution or the threats facing the species have been reduced, if it has not been delisted on the basis of recovery, the ESA's prohibitions and regulations remain applicable and the ESA should not be a 'one way street.' Of 40 total species removed from the list, 10 domestic species were delisted because of "recovery". Of 33 reclassified species, 10 domestic downlistings (a change from endangered to threatened status) reflected a reduced threat assessment which also allowed more flexibility in management. The FWS's most recent report to Congress (Fiscal years 2001-2002) shows that 77 percent of listed species fall in the 0 to 25 percent recovery achieved bracket and 2 percent fall in the 76 to 100 percent recovery achieved bracket. 39 percent of the FWS managed species are of uncertain status. Of those with an assessed trend, at one end of the spectrum are 3 percent possibly extinct, 1 percent occurring only in captivity and 21 percent declining and at the other end are 30 percent stable and 6 percent improving. These assessments however are subjective. Additionally, the assessment that a species is improving or stable may reflect, for example, a reduction in perceived threats or corrections to inaccurate threat assessments that stemmed from erroneous data rather than actual changes in species' trends that are demonstrated by improved numbers, distribution or other such measurements. Consequently, a meaningful assessment of conservation trends under the ESA using these data is not possible. The data used to list a number of species has been subsequently determined to be erroneous and species that likely do not merit classification as endangered or threatened remain listed. This can consume resources that could be directed to species that do merit listing. The assignment of recovery priorities appears highly skewed and the recovery priority for some species seems questionable. A meaningful distinction between endangered status and threatened status has been blurred as has been the framework for the mechanism of critical habitat. Expenditure reporting has improved but presents an incomplete picture of financial resources dedicated to endangered species. Workloads for litigation regarding activities such as consultation and listing under the ESA's complex structure compete for resources that could otherwise be directed at recovery efforts. The demands associated with ESA Section 4 determinations in combination with the pace of species listings and delistings, the number of possible future additions to the list and the economic impact of listings likely indicate that the current program is not sustainable. Title: Implementation of the Endangered Species Act of 1973 (Report to the House Committee on Resources) Author: United States. Congress. House. Committee on Resources Year: 2005, 2007 I. Executive Summary There is increasing recognition from most quarters that the Endangered Species Act (ESA) needs to be improved. Exactly what those improvements should be is less uniform. This report examines the implementation of selected aspects of the endangered species program relying predominately on information provided by the primary implementing agencies, the United States Fish and Wildlife Service (FWS) and National Marine Fisheries Service (NMFS) and offers some recommendations for possible improvements to the program. Debate over the ESA has traditionally been highly polarized. For example, compensating landowners for takings or reductions in property value has been opposed by some who argue updating the law to address this is not necessary. While consensus on other issues such as the need for increasing conservation incentives and the role states play in endangered species conservation has begun to emerge, one of the most debated aspects of ESA implementation continues to be whether the ESA is effectively conserving endangered and threatened species. While there have been significant strides in conserving individual species such as the whooping crane, red-cockaded woodpecker and gray wolf, few species have been delisted (removed from the endangered list) or downlisted (changed in status from endangered to threatened) because of successful ESA conservation efforts. Some argue that the number of recovered species is an unfair measure, asserting that the three decades the ESA has been in existence is an insufficient amount of time for the lengthy process of species recovery and point to listed species that have not gone extinct as evidence the ESA 'saves' species. From the opposing perspective, while recovery to the point of delisting may require a substantial amount of time for many species, after three decades more progress should be demonstrable through species that have recovered and been delisted. Even if a species has increased in numbers or distribution or the threats facing the species have been reduced, if it has not been delisted on the basis of recovery, the ESA's prohibitions and regulations remain applicable and the ESA should not be a 'one way street.' Of 40 total species removed from the list, 10 domestic species were delisted because of "recovery". Of 33 reclassified species, 10 domestic downlistings (a change from endangered to threatened status) reflected a reduced threat assessment which also allowed more flexibility in management. The FWS's most recent report to Congress (Fiscal years 2001-2002) shows that 77 percent of listed species fall in the 0 to 25 percent recovery achieved bracket and 2 percent fall in the 76 to 100 percent recovery achieved bracket. 39 percent of the FWS managed species are of uncertain status. Of those with an assessed trend, at one end of the spectrum are 3 percent possibly extinct, 1 percent occurring only in captivity and 21 percent declining and at the other end are 30 percent stable and 6 percent improving. These assessments however are subjective. Additionally, the assessment that a species is improving or stable may reflect, for example, a reduction in perceived threats or corrections to inaccurate threat assessments that stemmed from erroneous data rather than actual changes in species' trends that are demonstrated by improved numbers, distribution or other such measurements. Consequently, a meaningful assessment of conservation trends under the ESA using these data is not possible. The data used to list a number of species has been subsequently determined to be erroneous and species that likely do not merit classification as endangered or threatened remain listed. This can consume resources that could be directed to species that do merit listing. The assignment of recovery priorities appears highly skewed and the recovery priority for some species seems questionable. A meaningful distinction between endangered status and threatened status has been blurred as has been the framework for the mechanism of critical habitat. Expenditure reporting has improved but presents an incomplete picture of financial resources dedicated to endangered species. Workloads for litigation regarding activities such as consultation and listing under the ESA's complex structure compete for resources that could otherwise be directed at recovery efforts. The demands associated with ESA Section 4 determinations in combination with the pace of species listings and delistings, the number of possible future additions to the list and the economic impact of listings likely indicate that the current program is not sustainable. Close

• 22. [Image] Water quality and nutrient loading in the Klamath River between Keno, Oregon and Seiad Valley, California from 1996-1998

  	ABSTRACT A water quality study was performed in the mainstem Klamath River from Keno, Oregon to Seiad Valley, California during 1996 through 1998. Four sites within the study area were continuously ...
  	Citation × Citation Citation Abstract Copy Title: Water quality and nutrient loading in the Klamath River between Keno, Oregon and Seiad Valley, California from 1996-1998 Author: Campbell, S. G Year: 2001, 2007, 2005 ABSTRACT A water quality study was performed in the mainstem Klamath River from Keno, Oregon to Seiad Valley, California during 1996 through 1998. Four sites within the study area were continuously monitored using multiparameter recorders. Water quality sampling was also performed at these four locations in 1996 and 1997. Additional water quality sampling sites were added in 1998 for a total of 8 locations between Keno and Seiad. Temperature ranged from near zero ?C to >25 ?C with cooler temperatures in early spring and fall, and maximum temperatures occurring in July and August of each year. Dissolved oxygen concentration ranged from near zero mg/L to >13 mg/L with highest DO occurring in early spring and fall and lowest DO occurring in mid-summer. Air temperature was generally highly correlated with water temperature with r values ranging from 0.8 to 0.9 during the study period from 1996-1998. Water temperature in the study area exceeded chronic (>16?C) and acute (>22?C) criteria for salmonids during the summer months. Although chronic DO (<7 mg/L) criteria were exceeded throughout most of the study area during the summer, in the free-flowing river below Iron Gate Dam the acute DO (<5.5 mg/L) criteria were not exceeded. Nonpoint source pollution in the form of agricultural return flows, industrial, or sewage effluent entering the stream may have resulted in higher ammonia and total organic nitrogen concentrations at the upstream locations in the Klamath River study area (Keno and J.C. Boyle Powerplant). Nitrification of ammonia and organic nitrogen seemed to result in higher concentrations of nitrate in the downstream Klamath River (Iron Gate Dam). Total phosphorus concentration stayed relatively stable through the reservoirs in the study area, but decreased in the downstream direction between Iron Gate Dam and Seiad. Ortho-phosphorus concentrations increased longitudinally through the reservoirs, then decreased in the downstream direction between Iron Gate Dam and Seiad. An increase in ortho-phosphorus concentration can indicate internal cycling occurring in the reservoirs as well as photosynthesis. On an annual basis total phosphorus loading increased longitudinally from up- to downstream between Keno and Seiad. The increase was statistically significant (p = .03) indicating that the reservoirs in series in the Klamath River study area do not function as a nutrient sink. However, during the summer there was no statistically significant difference in total P loading when Keno, Iron Gate and Seiad locations were compared, therefore, the reservoirs may act as a nutrient sink seasonally. The Klamath River study locations were generally nitrogen limited, although at Keno, a regular change from N limitation to P limitation occurred during the fall of all three years of the study. When the Klamath River annual nutrient loading values are compared to other rivers in the vicinity, the Carson, Truckee, and Long Tom Rivers also appear to be nutrient enriched. The Carson and South Yamhill Rivers seem to be N limited systems and the Wood, Long Tom, Snake and Truckee Rivers seem to be P limited systems. Implementing management strategies for reservoir operations to improve water quality and reduce nutrient concentration or loading in the Klamath River study area to benefit anadromous fisheries may be difficult and expensive. However, improving the thermal regime in spring to benefit YOY salmonids may be possible as is short-term relief in fate summer for over-summering species. Decreases in nutrient concentration or loading accomplished through best management practices in the water shed may allow general protection of water resources in the Klamath Basin for future needs. Title: Water quality and nutrient loading in the Klamath River between Keno, Oregon and Seiad Valley, California from 1996-1998 Author: Campbell, S. G Year: 2001, 2007, 2005 ABSTRACT A water quality study was performed in the mainstem Klamath River from Keno, Oregon to Seiad Valley, California during 1996 through 1998. Four sites within the study area were continuously monitored using multiparameter recorders. Water quality sampling was also performed at these four locations in 1996 and 1997. Additional water quality sampling sites were added in 1998 for a total of 8 locations between Keno and Seiad. Temperature ranged from near zero ?C to >25 ?C with cooler temperatures in early spring and fall, and maximum temperatures occurring in July and August of each year. Dissolved oxygen concentration ranged from near zero mg/L to >13 mg/L with highest DO occurring in early spring and fall and lowest DO occurring in mid-summer. Air temperature was generally highly correlated with water temperature with r values ranging from 0.8 to 0.9 during the study period from 1996-1998. Water temperature in the study area exceeded chronic (>16?C) and acute (>22?C) criteria for salmonids during the summer months. Although chronic DO (<7 mg/L) criteria were exceeded throughout most of the study area during the summer, in the free-flowing river below Iron Gate Dam the acute DO (<5.5 mg/L) criteria were not exceeded. Nonpoint source pollution in the form of agricultural return flows, industrial, or sewage effluent entering the stream may have resulted in higher ammonia and total organic nitrogen concentrations at the upstream locations in the Klamath River study area (Keno and J.C. Boyle Powerplant). Nitrification of ammonia and organic nitrogen seemed to result in higher concentrations of nitrate in the downstream Klamath River (Iron Gate Dam). Total phosphorus concentration stayed relatively stable through the reservoirs in the study area, but decreased in the downstream direction between Iron Gate Dam and Seiad. Ortho-phosphorus concentrations increased longitudinally through the reservoirs, then decreased in the downstream direction between Iron Gate Dam and Seiad. An increase in ortho-phosphorus concentration can indicate internal cycling occurring in the reservoirs as well as photosynthesis. On an annual basis total phosphorus loading increased longitudinally from up- to downstream between Keno and Seiad. The increase was statistically significant (p = .03) indicating that the reservoirs in series in the Klamath River study area do not function as a nutrient sink. However, during the summer there was no statistically significant difference in total P loading when Keno, Iron Gate and Seiad locations were compared, therefore, the reservoirs may act as a nutrient sink seasonally. The Klamath River study locations were generally nitrogen limited, although at Keno, a regular change from N limitation to P limitation occurred during the fall of all three years of the study. When the Klamath River annual nutrient loading values are compared to other rivers in the vicinity, the Carson, Truckee, and Long Tom Rivers also appear to be nutrient enriched. The Carson and South Yamhill Rivers seem to be N limited systems and the Wood, Long Tom, Snake and Truckee Rivers seem to be P limited systems. Implementing management strategies for reservoir operations to improve water quality and reduce nutrient concentration or loading in the Klamath River study area to benefit anadromous fisheries may be difficult and expensive. However, improving the thermal regime in spring to benefit YOY salmonids may be possible as is short-term relief in fate summer for over-summering species. Decreases in nutrient concentration or loading accomplished through best management practices in the water shed may allow general protection of water resources in the Klamath Basin for future needs. Close

• 23. [Image] Lost River and shortnose sucker : proposed critical habitat : biological support document : draft

  	Proposed rule from Federal Register, vol. 59, no. 230, December 1, 1994, pages 61744-61759, inserted after p. 35; Includes biliographical references (p. 31-35)
  	Citation × Citation Citation Abstract Copy Title: Lost River and shortnose sucker : proposed critical habitat : biological support document : draft Author: U.S. Fish and Wildlife Service. Portland Field Office Year: 1994, 2004 Proposed rule from Federal Register, vol. 59, no. 230, December 1, 1994, pages 61744-61759, inserted after p. 35; Includes biliographical references (p. 31-35) Title: Lost River and shortnose sucker : proposed critical habitat : biological support document : draft Author: U.S. Fish and Wildlife Service. Portland Field Office Year: 1994, 2004 Proposed rule from Federal Register, vol. 59, no. 230, December 1, 1994, pages 61744-61759, inserted after p. 35; Includes biliographical references (p. 31-35) Close

• 24. [Image] An assessment of ecosystem components in the interior Columbia Basin and portions of the Klamath and Great Basins [volume 2]

  	Abstract Quigley, Thomas M.; Arbelbide, Sylvia J., tech. eds. 1997. An assessment of ecosystem components in the interior Columbia basin and portions of the Klamath and Great Basins: volume 2. Gen. Tech. ...
  	Citation × Citation Citation Abstract Copy Title: An assessment of ecosystem components in the interior Columbia Basin and portions of the Klamath and Great Basins [volume 2] Author: Quigley, Thomas Milton; Arbelbide, S. J. (Sylvia J.) Year: 1997, 2008, 2005 Abstract Quigley, Thomas M.; Arbelbide, Sylvia J., tech. eds. 1997. An assessment of ecosystem components in the interior Columbia basin and portions of the Klamath and Great Basins: volume 2. Gen. Tech. Rep. PNW-GTR-405. Portland, OR: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 4 vol. (Quigley, Thomas M., tech. ed.; The Interior Columbia Basin Ecosystem Management Project: Scientific Assessment). The Assessment of Ecosystem Components in the Interior Columbia Basin and Portions of the Klamath and Great Basins provides detailed information about current conditions and trends for the biophysical and social systems within the Basin. This information can be used by land managers to develop broad land management goals and priorities and provides the context for decisions specific to smaller geographic areas. The Assessment area covers about 8 percent of the U.S. land area, 24 percent of the Nations National Forest System lands, 10 percent of the Nations BLM-administered lands, and contains about 1.2 percent of the Nations population. This results in a population density that is less than one-sixth of the U.S. average. The area has experienced recent, rapid population growth and generally has a robust, diverse economy. As compared to historic conditions, the terrestrial, aquatic, forest, and rangeland systems have undergone dramatic changes. Forested landscapes are more susceptible to fire, insect, and disease than under historic conditions. Rangelands are highly susceptible to noxious weed invasion. The disturbance regimes that operate on forest and rangeland have changed substantially, with lethal fires dominating many areas where non-lethal fires were the norm historically. Terrestrial habitats that have experienced the greatest decline include the native grassland, native shrubland, and old forest structures. There are areas within the Assessment area that have higher diversity than others. Aquatic systems are now more fragmented and isolated than historically and the introduction of non-native fish species has complicated current status of native fishes. Core habitat and population centers do remain as building blocks for restoration. Social and economic conditions within the Assessment area vary considerably, depending to a great extent on population, diversity of employment opportunities, and changing demographics. Those counties with the higher population densities and greater diversity of employment opportunities are generally more resilient to economic downturns. This Assessment provides a rich information base, including over 170 mapped themes with associated models and databases, from which future decisions can benefit. Keywords: Columbia basin, biophysical systems, social systems, ecosystem. Title: An assessment of ecosystem components in the interior Columbia Basin and portions of the Klamath and Great Basins [volume 2] Author: Quigley, Thomas Milton; Arbelbide, S. J. (Sylvia J.) Year: 1997, 2008, 2005 Abstract Quigley, Thomas M.; Arbelbide, Sylvia J., tech. eds. 1997. An assessment of ecosystem components in the interior Columbia basin and portions of the Klamath and Great Basins: volume 2. Gen. Tech. Rep. PNW-GTR-405. Portland, OR: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 4 vol. (Quigley, Thomas M., tech. ed.; The Interior Columbia Basin Ecosystem Management Project: Scientific Assessment). The Assessment of Ecosystem Components in the Interior Columbia Basin and Portions of the Klamath and Great Basins provides detailed information about current conditions and trends for the biophysical and social systems within the Basin. This information can be used by land managers to develop broad land management goals and priorities and provides the context for decisions specific to smaller geographic areas. The Assessment area covers about 8 percent of the U.S. land area, 24 percent of the Nations National Forest System lands, 10 percent of the Nations BLM-administered lands, and contains about 1.2 percent of the Nations population. This results in a population density that is less than one-sixth of the U.S. average. The area has experienced recent, rapid population growth and generally has a robust, diverse economy. As compared to historic conditions, the terrestrial, aquatic, forest, and rangeland systems have undergone dramatic changes. Forested landscapes are more susceptible to fire, insect, and disease than under historic conditions. Rangelands are highly susceptible to noxious weed invasion. The disturbance regimes that operate on forest and rangeland have changed substantially, with lethal fires dominating many areas where non-lethal fires were the norm historically. Terrestrial habitats that have experienced the greatest decline include the native grassland, native shrubland, and old forest structures. There are areas within the Assessment area that have higher diversity than others. Aquatic systems are now more fragmented and isolated than historically and the introduction of non-native fish species has complicated current status of native fishes. Core habitat and population centers do remain as building blocks for restoration. Social and economic conditions within the Assessment area vary considerably, depending to a great extent on population, diversity of employment opportunities, and changing demographics. Those counties with the higher population densities and greater diversity of employment opportunities are generally more resilient to economic downturns. This Assessment provides a rich information base, including over 170 mapped themes with associated models and databases, from which future decisions can benefit. Keywords: Columbia basin, biophysical systems, social systems, ecosystem. Close

• 25. [Image] An assessment of ecosystem components in the interior Columbia Basin and portions of the Klamath and Great Basins [volume 1]

  	Quigley, Thomas M.; Arbelbide, Sylvia J., tech. eds. 1997. An assessment of ecosystem components in the interior Columbia basin and portions of the Klamath and Great Basins: volume 1. Gen. Tech. Rep. PNW-GTR-405. ...
  	Citation × Citation Citation Abstract Copy Title: An assessment of ecosystem components in the interior Columbia Basin and portions of the Klamath and Great Basins [volume 1] Author: Quigley, Thomas Milton; Arbelbide, S. J. (Sylvia J.) Year: 1997, 2008, 2005 Quigley, Thomas M.; Arbelbide, Sylvia J., tech. eds. 1997. An assessment of ecosystem components in the interior Columbia basin and portions of the Klamath and Great Basins: volume 1. Gen. Tech. Rep. PNW-GTR-405. Portland, OR: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 4 vol. (Quigley, Thomas M., tech. ed.; The Interior Columbia Basin Ecosystem Management Project: Scientific Assessment). The Assessment of Ecosystem Components in the Interior Columbia Basin and Portions of the Klamath and Great Basins provides detailed information about current conditions and trends for the biophysical and social systems within the Basin. This information can be used by land managers to develop broad land management goals and priorities and provides the context for decisions specific to smaller geographic areas. The Assessment area covers about 8 percent of the U.S. land area, 24 percent of the Nation's National Forest System lands, 10 percent of the Nation's BLM-administered lands, and contains about 1.2 percent of the Nation's population. This results in a population density that is less than one-sixth of the U.S. average. The area has experienced recent, rapid population growth and generally has a robust, diverse economy. As compared to historic conditions, the terrestrial, aquatic, forest, and rangeland systems have undergone dramatic changes. Forested landscapes are more susceptible to fire, insect, and disease than under historic conditions. Rangelands are highly susceptible to noxious weed invasion. The disturbance regimes that operate on forest and rangeland have changed substantially, with lethal fires dominating many areas where non-lethal fires were the norm historically. Terrestrial habitats that have experienced the greatest decline include the native grassland, native shrubland, and old forest structures. There are areas within the Assessment area that have higher diversity than others. Aquatic systems are now more fragmented and isolated than historically and the introduction of non-native fish species has complicated current status of native fishes. Core habitat and population centers do remain as building blocks for restoration. Social and economic conditions within the Assessment area vary considerably, depending to a great extent on population, diversity of employment opportunities, and changing demographics. Those counties with the higher population densities and greater diversity of employment opportunities are generally more resilient to economic downturns. This Assessment provides a rich information base, including over 170 mapped themes with associated models and databases, from which future decisions can benefit. Keywords: Columbia basin, biophysical systems, social systems, ecosystem. Title: An assessment of ecosystem components in the interior Columbia Basin and portions of the Klamath and Great Basins [volume 1] Author: Quigley, Thomas Milton; Arbelbide, S. J. (Sylvia J.) Year: 1997, 2008, 2005 Quigley, Thomas M.; Arbelbide, Sylvia J., tech. eds. 1997. An assessment of ecosystem components in the interior Columbia basin and portions of the Klamath and Great Basins: volume 1. Gen. Tech. Rep. PNW-GTR-405. Portland, OR: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 4 vol. (Quigley, Thomas M., tech. ed.; The Interior Columbia Basin Ecosystem Management Project: Scientific Assessment). The Assessment of Ecosystem Components in the Interior Columbia Basin and Portions of the Klamath and Great Basins provides detailed information about current conditions and trends for the biophysical and social systems within the Basin. This information can be used by land managers to develop broad land management goals and priorities and provides the context for decisions specific to smaller geographic areas. The Assessment area covers about 8 percent of the U.S. land area, 24 percent of the Nation's National Forest System lands, 10 percent of the Nation's BLM-administered lands, and contains about 1.2 percent of the Nation's population. This results in a population density that is less than one-sixth of the U.S. average. The area has experienced recent, rapid population growth and generally has a robust, diverse economy. As compared to historic conditions, the terrestrial, aquatic, forest, and rangeland systems have undergone dramatic changes. Forested landscapes are more susceptible to fire, insect, and disease than under historic conditions. Rangelands are highly susceptible to noxious weed invasion. The disturbance regimes that operate on forest and rangeland have changed substantially, with lethal fires dominating many areas where non-lethal fires were the norm historically. Terrestrial habitats that have experienced the greatest decline include the native grassland, native shrubland, and old forest structures. There are areas within the Assessment area that have higher diversity than others. Aquatic systems are now more fragmented and isolated than historically and the introduction of non-native fish species has complicated current status of native fishes. Core habitat and population centers do remain as building blocks for restoration. Social and economic conditions within the Assessment area vary considerably, depending to a great extent on population, diversity of employment opportunities, and changing demographics. Those counties with the higher population densities and greater diversity of employment opportunities are generally more resilient to economic downturns. This Assessment provides a rich information base, including over 170 mapped themes with associated models and databases, from which future decisions can benefit. Keywords: Columbia basin, biophysical systems, social systems, ecosystem. Close

• 26. [Image] Annual program summary 2004

  	Annual Program Summary and Monitoring Report - FY2004 Table of Contents ANNUAL PROGRAM SUMMARY 1.0 Introduction 3 2.0 Summary of Accomplishments 3 3.0 Budget and Employment 6 4.0 Land ...
  	Citation × Citation Citation Abstract Copy Title: Annual program summary 2004 Author: United States. Bureau of Land Management. Klamath Falls Resource Area Office District Year: 2005 Annual Program Summary and Monitoring Report - FY2004 Table of Contents ANNUAL PROGRAM SUMMARY 1.0 Introduction 3 2.0 Summary of Accomplishments 3 3.0 Budget and Employment 6 4.0 Land Use Allocations within the Klamath Falls Resource Area 6 Late-Successional Reserves and Assessments 8 Matrix 8 5.0 Aquatic Conservation Strategy 9 Riparian Reserves 9 Watershed Analysis and Key Watersheds 9 Watershed Restoration 10 Roads 10 Riparian Habitat Enhancement 10 Stream Restoration 11 6.0 Air Quality 11 7.0 Water and Soils 11 Water - Project Implementation 11 Soils - Project Implementation 12 Water - Inventory and Monitoring 12 Soils -Inventory and Monitoring 13 State-listed Clean Water Act 303d Streams 13 RMP Best Management Practices 13 8.0 Terrestrial Species and Habitat Management 14 Survey and Manage Species 14 Threatened/Endangered Species 14 Northern Spotted Owl 14 Bald Eagle 14 Special Status Species-Animals 15 Peregrine Falcon 15 Yellow Rails 15 Bats 15 Northern Goshawk 15 Oregon Spotted Frog 15 Sage Grouse 16 vii Klamath Falls Resource Area Mollusks 16 Great Gray Owl 16 Special Status Species - Plants 16 Other Species of Concern 17 Neotropical Migratory Landbirds 17 Terrestrial Habitat Management 17 Nest Sites, Activity Centers, and Rookeries 17 Big Game Habitat 19 9.0 Aquatic Species and Habitat Management 19 Threatened/Endangered Species 19 Lost River and Shortnose Suckers 19 Bull Trout 20 Endangered Species Act Consultation 20 Aquatic Habitat Restoration 20 Klamath River Hydroelectric Facility Relicensing 21 10.0 Pathogen, Disease, and Pest Management 21 11.0 Weed Management 22 Inventories 22 Control 22 12.0 Special Areas/Management 23 Wild and Scenic Rivers 23 Wilderness 23 Areas of Critical Environmental Concern 23 Tunnel Creek Special Botanical Area 24 Klamath Canyon ACEC 24 Old Baldy Research Natural Area 24 Wood River Wetland ACEC 24 Environmental Education Areas 25 13.0 Cultural Resources 26 14.0 Visual Resources 26 15.0 Rural Interface Areas 26 16.0 Socioeconomic Conditions 27 Jobs-in-the-Woods 28 17.0 Environmental Justice 30 18.0 Recreation 30 Recreation Pipeline Restoration Funds 30 Recreation Projects 31 viii Annual Program Summary and Monitoring Report - FY2004 Recreation Fee Demonstration Project 31 Status of Recreation Plans 32 Volunteer Activities 32 Tourism 33 19.0 Forest Management and Timber Resources 33 Silvicultural Prescriptions 33 Timber Sale Planning 34 FY 2004 Timber Sale Accomplishments 34 Status of Sold & Awarded Klamath Falls RMP Timber Sales 35 Forest Development Activities 39 Stewardship Contracting 42 20.0 Special Forest Products 42 21.0 Energy and Minerals 43 22.0 Land Tenure Adjustments 44 23.0 Access and Rights-of-Way 45 24.0 Transportation and Roads 45 25.0 Hazardous Materials 46 26.0 Wildfire/Fuels Management 46 27.0 Law Enforcement 47 28.0 Rangeland Resources / Grazing Management 48 Fiscal Year 2004 Summary 49 Fiscal Years 1996-2004 Summary 50 Wild Horse Management 51 29.0 Cadastral Survey 52 30.0 Education and Outreach 52 31.0 Research 56 32.0 Coordination and Consultation 58 Federal Agencies 58 State of Oregon 58 Counties 59 Cities 59 Tribes 59 IX Klamath Falls Resource Area Watershed Councils 59 Chartered Advisory Groups 60 Other Local Coordination and Cooperation 61 33.0 National Environmental Policy Act Analysis and Documentation 63 NEPA documentation 63 Klamath Falls Resource Area Environmental Documentation 63 Protests and Appeals 63 34.0 Plan Evaluations 64 Third Year Evaluation 64 Eighth Year Evaluation 64 35.0 Plan Maintenance 65 36.0 Plan Amendments 72 Plan Revision 76 MONITORING REPORT Introduction 79 All Land Use Allocations 83 Late-Successional Reserves 86 Matrix 88 Riparian Reserves 92 Air Quality 95 Water and Soils 96 Terrestrial Species Habitat 101 Special Status and SEIS Special Attention Species Habitat 106 Aquatic Species Habitat 110 Noxious Weeds 112 Special Areas 113 Wild and Scenic Rivers 115 Cultural Resources Including American Indian Values 116 Visual Resources 118 Rural Interface Areas 119 Socioeconomic Conditions 120 Recreation 121 Forest Management and Timber Resources 121 Special Forest/Natural Products 122 Wildfire / Fuels Management 124 Rangeland Resources / Grazing Management 124 GLOSSARY/ACRONYMS 129 Annual Program Summary and Monitoring Report - FY2004 List of Tables Table 2.1 - Summary of Resource Management Actions, Directions, and Accomplishments 4 Table 2.1 - Summary of Resource Management Actions, Directions, and Accomplishments (Cont.).5 Table 3.1 - Resource Area Budget Fiscal Year 2004 6 Table 4.1 - Land Use Allocation 8 Table 5.1 - Watershed Analysis Schedule 10 Table 5.2-Watershed Analysis Status Fiscal Year 2004 10 Table 6.1 -Air Quality Management Fiscal Year 2004 11 Table 7.1 - Watershed Activity Fiscal Year 2004 12 Table 7.2 - KFRA Clean Water Act 303(d) Water Bodies 13 Table 8.1a - BLM /KFRA Special Status Species Designations Summary -Animals 18 Table 8.1b - BLM (KFRA) Special Status Species Designations Summary - Plants 18 Table 8.2 - Terrestrial Habitat Monitoring Fiscal Year 2004 18 Table 8.3 - Monitoring for Nest Sites, Activity Centers, Rookeries, Special Habitats 18 Table 9.1 -Aquatic Habitat/ Fish Passage Management Fiscal Year 2004 19 Table 11.1 - Managed Weed Species 20 Table 12.1 - Special Management Areas 25 Table 13.1 - Cultural Resources Management Fiscal Year 2004 26 Table 16.1 - Total Payments in Lieu of Taxes and Acres by County for FY 2004 28 Table 16.2 - O&C Payments To Counties FY 2004 29 Table 16.3 - Jobs in the Woods Program Fiscal Year 2004 29 Table 18.1 - Recreation Statistics Fiscal Year 2004 30 Table 18.2 - Recreation Fee Demonstration Project Fiscal Year 2004 32 Table 19.1 - Klamath Falls Timber Sale Volume (MBF) and Acres FY 2004 35 Table 19.2-Timber Volume Sold in FY 2004 36 Table 19.3 - Harvest Activity for FY 2004 36 Table 19.4 - Planned Timber Sales (FY 2005 & 2006) 36 Table 19.5 - Status of Sold and Awarded Timber Sales 37 Table 19.6 - Summary of Volume Sold 38 Table 19.7 -Volume and Acres Sold by Allocations 38 Table 19.8 - Timber Sales Sold by Harvest Types 38 Table 19.9 - Timber Sale Acres Sold by Age Class 39 Table 19.10 - Forest Development Activities 41 Table 20.1 - Special Forest Products Fiscal Year 2004 43 Table 21.1 - Energy and Minerals Management Fiscal Year 2004 44 Table 22.1 - Land Use Tenure Adjustments Fiscal Year 2004 45 Table 24.1 - Roads and Transportation Management Fiscal Year 2004 45 Table 25.1 - Hazardous Materials Management Fiscal Year 2004 46 Table 26.1 - Fire and Fuels Management Fiscal Year 2004 46 Table 27.1 - Law Enforcement Fiscal Year 2004 47 Table 28.1 - Range Resources Management Fiscal Year 2004 48 Table 29.1 -Cadastral Survey Summary Fiscal Year 2004 52 Table 30.1 - Environmental Education/Outreach Program Summary FY2004 54 Table 30.2 - Environmental Education/Outreach Special Events FY2004 55 Table 30.3 - Environmental Education/Outreach Programs & Tours FY 2004 56 Table 32.1 - Challenge Cost Share Fiscal Year 2004 62 XI Klamath Falls Resource Area Table 33.1 - NEPA Analyses and Documentation Fiscal Year 2004 64 Table 36.1 - Redefined Survey and Manage Categories 74 Table M.I - Projects Monitored FY 2004 80 Table M-2 - FY 2004 Implementation Monitoring Selection Categories 81 Table M-3 - Comparison of Projected vs. Actual Harvest Volume (MMBF)/Acres to Date 82 Table M-4 - Timber Sale Volume and Acres Offered (Entire Resource Area) 83 Table M-5 - Timber Sale Monitoring Summary 89 Table M-6 - Post Treatment Stand Characteristics for West Grenada Timber Sale - FY 2004 90 Table M-7 - Status of Watershed Analysis 98 List of Figures Figure 1 - General Location Map 2 Figure 2 - KFRA Land Allocations 7 Xll Title: Annual program summary 2004 Author: United States. Bureau of Land Management. Klamath Falls Resource Area Office District Year: 2005 Annual Program Summary and Monitoring Report - FY2004 Table of Contents ANNUAL PROGRAM SUMMARY 1.0 Introduction 3 2.0 Summary of Accomplishments 3 3.0 Budget and Employment 6 4.0 Land Use Allocations within the Klamath Falls Resource Area 6 Late-Successional Reserves and Assessments 8 Matrix 8 5.0 Aquatic Conservation Strategy 9 Riparian Reserves 9 Watershed Analysis and Key Watersheds 9 Watershed Restoration 10 Roads 10 Riparian Habitat Enhancement 10 Stream Restoration 11 6.0 Air Quality 11 7.0 Water and Soils 11 Water - Project Implementation 11 Soils - Project Implementation 12 Water - Inventory and Monitoring 12 Soils -Inventory and Monitoring 13 State-listed Clean Water Act 303d Streams 13 RMP Best Management Practices 13 8.0 Terrestrial Species and Habitat Management 14 Survey and Manage Species 14 Threatened/Endangered Species 14 Northern Spotted Owl 14 Bald Eagle 14 Special Status Species-Animals 15 Peregrine Falcon 15 Yellow Rails 15 Bats 15 Northern Goshawk 15 Oregon Spotted Frog 15 Sage Grouse 16 vii Klamath Falls Resource Area Mollusks 16 Great Gray Owl 16 Special Status Species - Plants 16 Other Species of Concern 17 Neotropical Migratory Landbirds 17 Terrestrial Habitat Management 17 Nest Sites, Activity Centers, and Rookeries 17 Big Game Habitat 19 9.0 Aquatic Species and Habitat Management 19 Threatened/Endangered Species 19 Lost River and Shortnose Suckers 19 Bull Trout 20 Endangered Species Act Consultation 20 Aquatic Habitat Restoration 20 Klamath River Hydroelectric Facility Relicensing 21 10.0 Pathogen, Disease, and Pest Management 21 11.0 Weed Management 22 Inventories 22 Control 22 12.0 Special Areas/Management 23 Wild and Scenic Rivers 23 Wilderness 23 Areas of Critical Environmental Concern 23 Tunnel Creek Special Botanical Area 24 Klamath Canyon ACEC 24 Old Baldy Research Natural Area 24 Wood River Wetland ACEC 24 Environmental Education Areas 25 13.0 Cultural Resources 26 14.0 Visual Resources 26 15.0 Rural Interface Areas 26 16.0 Socioeconomic Conditions 27 Jobs-in-the-Woods 28 17.0 Environmental Justice 30 18.0 Recreation 30 Recreation Pipeline Restoration Funds 30 Recreation Projects 31 viii Annual Program Summary and Monitoring Report - FY2004 Recreation Fee Demonstration Project 31 Status of Recreation Plans 32 Volunteer Activities 32 Tourism 33 19.0 Forest Management and Timber Resources 33 Silvicultural Prescriptions 33 Timber Sale Planning 34 FY 2004 Timber Sale Accomplishments 34 Status of Sold & Awarded Klamath Falls RMP Timber Sales 35 Forest Development Activities 39 Stewardship Contracting 42 20.0 Special Forest Products 42 21.0 Energy and Minerals 43 22.0 Land Tenure Adjustments 44 23.0 Access and Rights-of-Way 45 24.0 Transportation and Roads 45 25.0 Hazardous Materials 46 26.0 Wildfire/Fuels Management 46 27.0 Law Enforcement 47 28.0 Rangeland Resources / Grazing Management 48 Fiscal Year 2004 Summary 49 Fiscal Years 1996-2004 Summary 50 Wild Horse Management 51 29.0 Cadastral Survey 52 30.0 Education and Outreach 52 31.0 Research 56 32.0 Coordination and Consultation 58 Federal Agencies 58 State of Oregon 58 Counties 59 Cities 59 Tribes 59 IX Klamath Falls Resource Area Watershed Councils 59 Chartered Advisory Groups 60 Other Local Coordination and Cooperation 61 33.0 National Environmental Policy Act Analysis and Documentation 63 NEPA documentation 63 Klamath Falls Resource Area Environmental Documentation 63 Protests and Appeals 63 34.0 Plan Evaluations 64 Third Year Evaluation 64 Eighth Year Evaluation 64 35.0 Plan Maintenance 65 36.0 Plan Amendments 72 Plan Revision 76 MONITORING REPORT Introduction 79 All Land Use Allocations 83 Late-Successional Reserves 86 Matrix 88 Riparian Reserves 92 Air Quality 95 Water and Soils 96 Terrestrial Species Habitat 101 Special Status and SEIS Special Attention Species Habitat 106 Aquatic Species Habitat 110 Noxious Weeds 112 Special Areas 113 Wild and Scenic Rivers 115 Cultural Resources Including American Indian Values 116 Visual Resources 118 Rural Interface Areas 119 Socioeconomic Conditions 120 Recreation 121 Forest Management and Timber Resources 121 Special Forest/Natural Products 122 Wildfire / Fuels Management 124 Rangeland Resources / Grazing Management 124 GLOSSARY/ACRONYMS 129 Annual Program Summary and Monitoring Report - FY2004 List of Tables Table 2.1 - Summary of Resource Management Actions, Directions, and Accomplishments 4 Table 2.1 - Summary of Resource Management Actions, Directions, and Accomplishments (Cont.).5 Table 3.1 - Resource Area Budget Fiscal Year 2004 6 Table 4.1 - Land Use Allocation 8 Table 5.1 - Watershed Analysis Schedule 10 Table 5.2-Watershed Analysis Status Fiscal Year 2004 10 Table 6.1 -Air Quality Management Fiscal Year 2004 11 Table 7.1 - Watershed Activity Fiscal Year 2004 12 Table 7.2 - KFRA Clean Water Act 303(d) Water Bodies 13 Table 8.1a - BLM /KFRA Special Status Species Designations Summary -Animals 18 Table 8.1b - BLM (KFRA) Special Status Species Designations Summary - Plants 18 Table 8.2 - Terrestrial Habitat Monitoring Fiscal Year 2004 18 Table 8.3 - Monitoring for Nest Sites, Activity Centers, Rookeries, Special Habitats 18 Table 9.1 -Aquatic Habitat/ Fish Passage Management Fiscal Year 2004 19 Table 11.1 - Managed Weed Species 20 Table 12.1 - Special Management Areas 25 Table 13.1 - Cultural Resources Management Fiscal Year 2004 26 Table 16.1 - Total Payments in Lieu of Taxes and Acres by County for FY 2004 28 Table 16.2 - O&C Payments To Counties FY 2004 29 Table 16.3 - Jobs in the Woods Program Fiscal Year 2004 29 Table 18.1 - Recreation Statistics Fiscal Year 2004 30 Table 18.2 - Recreation Fee Demonstration Project Fiscal Year 2004 32 Table 19.1 - Klamath Falls Timber Sale Volume (MBF) and Acres FY 2004 35 Table 19.2-Timber Volume Sold in FY 2004 36 Table 19.3 - Harvest Activity for FY 2004 36 Table 19.4 - Planned Timber Sales (FY 2005 & 2006) 36 Table 19.5 - Status of Sold and Awarded Timber Sales 37 Table 19.6 - Summary of Volume Sold 38 Table 19.7 -Volume and Acres Sold by Allocations 38 Table 19.8 - Timber Sales Sold by Harvest Types 38 Table 19.9 - Timber Sale Acres Sold by Age Class 39 Table 19.10 - Forest Development Activities 41 Table 20.1 - Special Forest Products Fiscal Year 2004 43 Table 21.1 - Energy and Minerals Management Fiscal Year 2004 44 Table 22.1 - Land Use Tenure Adjustments Fiscal Year 2004 45 Table 24.1 - Roads and Transportation Management Fiscal Year 2004 45 Table 25.1 - Hazardous Materials Management Fiscal Year 2004 46 Table 26.1 - Fire and Fuels Management Fiscal Year 2004 46 Table 27.1 - Law Enforcement Fiscal Year 2004 47 Table 28.1 - Range Resources Management Fiscal Year 2004 48 Table 29.1 -Cadastral Survey Summary Fiscal Year 2004 52 Table 30.1 - Environmental Education/Outreach Program Summary FY2004 54 Table 30.2 - Environmental Education/Outreach Special Events FY2004 55 Table 30.3 - Environmental Education/Outreach Programs & Tours FY 2004 56 Table 32.1 - Challenge Cost Share Fiscal Year 2004 62 XI Klamath Falls Resource Area Table 33.1 - NEPA Analyses and Documentation Fiscal Year 2004 64 Table 36.1 - Redefined Survey and Manage Categories 74 Table M.I - Projects Monitored FY 2004 80 Table M-2 - FY 2004 Implementation Monitoring Selection Categories 81 Table M-3 - Comparison of Projected vs. Actual Harvest Volume (MMBF)/Acres to Date 82 Table M-4 - Timber Sale Volume and Acres Offered (Entire Resource Area) 83 Table M-5 - Timber Sale Monitoring Summary 89 Table M-6 - Post Treatment Stand Characteristics for West Grenada Timber Sale - FY 2004 90 Table M-7 - Status of Watershed Analysis 98 List of Figures Figure 1 - General Location Map 2 Figure 2 - KFRA Land Allocations 7 Xll Close

• 27. [Image] The Oregon conservation strategy

  	v, 419 p.; col.ill.; col.maps; "February 2006"; Foreword by Marla Rae, Chair, Oregon Fish and Wildlife Commission
  	Citation × Citation Citation Abstract Copy Title: The Oregon conservation strategy Year: 2006 v, 419 p.; col.ill.; col.maps; "February 2006"; Foreword by Marla Rae, Chair, Oregon Fish and Wildlife Commission Title: The Oregon conservation strategy Year: 2006 v, 419 p.; col.ill.; col.maps; "February 2006"; Foreword by Marla Rae, Chair, Oregon Fish and Wildlife Commission Close

• 28. [Image] Range maps of terrestrial species in the interior Columbia River basin and Northern portions of the Klamath and Great Basins

  	Abstract Marcot, Bruce G.; Wales, Barbara C; Demmer, Rick. 2003. Range maps of terrestrial species in the interior Columbia River basin and northern portions of the Klamath and Great Basins. Gen. Tech. ...
  	Citation × Citation Citation Abstract Copy Title: Range maps of terrestrial species in the interior Columbia River basin and Northern portions of the Klamath and Great Basins Author: Marcot, Bruce G. Year: 2003, 2005, 2004 Abstract Marcot, Bruce G.; Wales, Barbara C; Demmer, Rick. 2003. Range maps of terrestrial species in the interior Columbia River basin and northern portions of the Klamath and Great Basins. Gen. Tech. Rep. PNW-GTR-583. Portland, OR: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 304 p. Current range distribution maps are presented for 14 invertebrate, 26 amphibian, 26 reptile, 339 bird, and 125 mammal species and selected subspecies (530 total taxa) of the interior Columbia River basin and northern portions of the Klamath and Great Basins in the United States. Also presented are maps of historical ranges of 3 bird and 10 mammal species, and 6 maps of natural areas designated by federal agencies and other organizations. The species range maps were derived from a variety of publications and from expert review and unpublished data, and thus differ in degree of accuracy and resolution. The species maps are available in computer versions and are indexed herein by common and scientific names. Keywords: Maps, species range, species distribution, wildlife, invertebrates, arthropods, amphibians, reptiles, birds, mammals, bats, biodiversity, endemism, natural areas, interior Columbia River basin, Klamath Basin, Great Basin. Title: Range maps of terrestrial species in the interior Columbia River basin and Northern portions of the Klamath and Great Basins Author: Marcot, Bruce G. Year: 2003, 2005, 2004 Abstract Marcot, Bruce G.; Wales, Barbara C; Demmer, Rick. 2003. Range maps of terrestrial species in the interior Columbia River basin and northern portions of the Klamath and Great Basins. Gen. Tech. Rep. PNW-GTR-583. Portland, OR: U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station. 304 p. Current range distribution maps are presented for 14 invertebrate, 26 amphibian, 26 reptile, 339 bird, and 125 mammal species and selected subspecies (530 total taxa) of the interior Columbia River basin and northern portions of the Klamath and Great Basins in the United States. Also presented are maps of historical ranges of 3 bird and 10 mammal species, and 6 maps of natural areas designated by federal agencies and other organizations. The species range maps were derived from a variety of publications and from expert review and unpublished data, and thus differ in degree of accuracy and resolution. The species maps are available in computer versions and are indexed herein by common and scientific names. Keywords: Maps, species range, species distribution, wildlife, invertebrates, arthropods, amphibians, reptiles, birds, mammals, bats, biodiversity, endemism, natural areas, interior Columbia River basin, Klamath Basin, Great Basin. Close

• 29. [Article] Effects of Arbuscular Mycorrhizal Fungal Infection and Common Mycelial Network Formation on Invasive Plant Competition

  Understanding the biotic factors influencing invasive plant performance is essential for managing invaded land and preventing further exotic establishment and spread. I studied how competition between ...

  Citation × Citation Citation Abstract Copy Title: Effects of Arbuscular Mycorrhizal Fungal Infection and Common Mycelial Network Formation on Invasive Plant Competition Author: Workman, Rachael Elizabeth Year: 2014 Understanding the biotic factors influencing invasive plant performance is essential for managing invaded land and preventing further exotic establishment and spread. I studied how competition between both conspecifics and native co-habitants and arbuscular mycorrhizal fungal (AMF) impacted the success of the invasive bunchgrass Brachypodium sylvaticumin early growth stages. I examined whether invasive plants performed and competed differently when grown in soil containing AMF from adjacent invaded and noninvaded ranges in order to determine the contribution of AMF to both monoculture stability and spread of the invasive to noninvaded territory. I also directly manipulated common mycelial network (CMN) formation by AMF to determine hyphal network contribution to competitive interactions. I found that invasive plants performed most poorly (as indicated by decreased chlorophyll content, size and shoot dry mass) in invaded range soil against conspecifics. This could be two-pronged evidence for existing biotic pressure on the invasives to expand into adjacent noninvaded ranges. I also found a negative effect of AMF colonization and invasive plant performance, potentially indicating deleterious plant-soil feedbacks which could help maintain plant biodiversity at a community level. CMN effects were found to be interactive with root competition and directly affected the performance and nutrient status of B. sylvaticum. Although no direct correlations between AMF colonization levels and competition were found, CMN presence contributed significantly to plant growth and nutrient status. Therefore AMF, through infection and CMN formation, may be able to influence invasive plant growth and spread in the field. Title: Effects of Arbuscular Mycorrhizal Fungal Infection and Common Mycelial Network Formation on Invasive Plant Competition Author: Workman, Rachael Elizabeth Year: 2014 Understanding the biotic factors influencing invasive plant performance is essential for managing invaded land and preventing further exotic establishment and spread. I studied how competition between both conspecifics and native co-habitants and arbuscular mycorrhizal fungal (AMF) impacted the success of the invasive bunchgrass Brachypodium sylvaticumin early growth stages. I examined whether invasive plants performed and competed differently when grown in soil containing AMF from adjacent invaded and noninvaded ranges in order to determine the contribution of AMF to both monoculture stability and spread of the invasive to noninvaded territory. I also directly manipulated common mycelial network (CMN) formation by AMF to determine hyphal network contribution to competitive interactions. I found that invasive plants performed most poorly (as indicated by decreased chlorophyll content, size and shoot dry mass) in invaded range soil against conspecifics. This could be two-pronged evidence for existing biotic pressure on the invasives to expand into adjacent noninvaded ranges. I also found a negative effect of AMF colonization and invasive plant performance, potentially indicating deleterious plant-soil feedbacks which could help maintain plant biodiversity at a community level. CMN effects were found to be interactive with root competition and directly affected the performance and nutrient status of B. sylvaticum. Although no direct correlations between AMF colonization levels and competition were found, CMN presence contributed significantly to plant growth and nutrient status. Therefore AMF, through infection and CMN formation, may be able to influence invasive plant growth and spread in the field. Close

• 30. [Article] The Boiling Springs Lake Metavirome: Charting the Viral Sequence-Space of an Extreme Environment Microbial Ecosystem

  Viruses are the most abundant organisms on Earth, yet their collective evolutionary history, biodiversity and functional capacity is not well understood. Viral metagenomics offers a potential means of ...

  Citation × Citation Citation Abstract Copy Title: The Boiling Springs Lake Metavirome: Charting the Viral Sequence-Space of an Extreme Environment Microbial Ecosystem Author: Diemer, Geoffrey Scott Year: 2014 Viruses are the most abundant organisms on Earth, yet their collective evolutionary history, biodiversity and functional capacity is not well understood. Viral metagenomics offers a potential means of establishing a more comprehensive view of virus diversity and evolution, as vast amounts of new sequence data becomes available for comparative analysis.Metagenomic DNA from virus-sized particles (smaller than 0.2 microns in diameter) was isolated from approximately 20 liters of sediment obtained from Boiling Springs Lake (BSL) and sequenced. BSL is a large, acidic hot-spring (with a pH of 2.2, and temperatures ranging from 50°C to 96°C) located in Lassen Volcanic National Park, USA. BSL supports a purely microbial ecosystem comprised largely of Archaea and Bacteria, however, the lower temperature regions permit the growth of acid- and thermo-tolerant Eukarya. This distinctive feature of the BSL microbial ecosystem ensures that virus types infecting all domains of life will be present. The metagenomic sequence data was used to characterize the types of viruses present within the microbial ecosystem, to ascertain the extent of genetic diversity and novelty comprising the BSL virus assemblage, and to explore the genomic and structural modalities of virus evolution.Metagenomic surveys of natural virus assemblages, including the survey of BSL, have revealed that the diversity within the virosphere far exceeds what has currently been determined through the detailed study of viruses that are relevant to human health and agriculture. The number of as-yet-uncharacterized virus protein families present in the BSL assemblage was estimated by clustering analysis. Genomic context analysis of the predicted viral protein sequences in the BSL dataset indicates that most of the putative uncharacterized proteins are endemic or unique to BSL, and are largely harbored by known virus types. A comparative metagenomic analysis approach identified a set of conserved, yet uncharacterized BSL protein sequences that are commonly found in other similar and dissimilar environments.New sequence data from metagenomic surveys of natural virus assemblages was also used to better characterize and define known virus protein families, as some of the viruses found in the BSL environment represent distant relatives of well-characterized isolates. By comparing viral genes and protein sequences from these highly divergent species, it is possible to better understand the dynamics of adaptation and evolution in the virosphere. Additionally, as structures of virus proteins continue to be experimentally determined by X-ray crystallography and cryo-electron microscopy, a merger of structural and metagenomic sequence data allows the opportunity to observe the structural dynamics underlying virus protein evolution.Capsid (structural) proteins from two distinct Microviridae strains; a globally ubiquitous and highly sequence-diverse virus family, were identified in, and isolated from the BSL metagenomic DNA sample. These BSL capsid protein sequences, along with several other homologous sequences derived from metagenomic surveys and laboratory isolates, were mapped to the solved structure of a closely related capsid protein from the Spiroplasma phage-4 microvirus. Patterns of amino acid sequence conservation, unveiled by structure-based homology modeling analysis, revealed that the protein sequences within this family exhibit a remarkable level of plasticity, while remaining structurally and functionally congruent.Lateral gene transfer is thought to have had a significant impact on the genomic evolution and adaptation of virus families. Genomic context analysis was also utilized to identify interviral gene transfer within the BSL virus assemblage. An ostensibly rare interviral gene transfer event, having transpired between single-stranded RNA and DNA virus types, was detected in the BSL metagenome. Similar genomes were subsequently detected in other ecosystems around the globe. The discovery of this new virus genome dramatically underscores the scope and importance of genetic mobility and genomic mosaicism as major forces driving the evolution of viruses.The analyses conducted herein demonstrate the many ways in which viral metagenomic sequence data may be utilized to not only evaluate the composition of a natural virus assemblage, but to discover new viral genes, and to better understand the dynamics of both genomic and structural evolution within the virosphere. Title: The Boiling Springs Lake Metavirome: Charting the Viral Sequence-Space of an Extreme Environment Microbial Ecosystem Author: Diemer, Geoffrey Scott Year: 2014 Viruses are the most abundant organisms on Earth, yet their collective evolutionary history, biodiversity and functional capacity is not well understood. Viral metagenomics offers a potential means of establishing a more comprehensive view of virus diversity and evolution, as vast amounts of new sequence data becomes available for comparative analysis.Metagenomic DNA from virus-sized particles (smaller than 0.2 microns in diameter) was isolated from approximately 20 liters of sediment obtained from Boiling Springs Lake (BSL) and sequenced. BSL is a large, acidic hot-spring (with a pH of 2.2, and temperatures ranging from 50°C to 96°C) located in Lassen Volcanic National Park, USA. BSL supports a purely microbial ecosystem comprised largely of Archaea and Bacteria, however, the lower temperature regions permit the growth of acid- and thermo-tolerant Eukarya. This distinctive feature of the BSL microbial ecosystem ensures that virus types infecting all domains of life will be present. The metagenomic sequence data was used to characterize the types of viruses present within the microbial ecosystem, to ascertain the extent of genetic diversity and novelty comprising the BSL virus assemblage, and to explore the genomic and structural modalities of virus evolution.Metagenomic surveys of natural virus assemblages, including the survey of BSL, have revealed that the diversity within the virosphere far exceeds what has currently been determined through the detailed study of viruses that are relevant to human health and agriculture. The number of as-yet-uncharacterized virus protein families present in the BSL assemblage was estimated by clustering analysis. Genomic context analysis of the predicted viral protein sequences in the BSL dataset indicates that most of the putative uncharacterized proteins are endemic or unique to BSL, and are largely harbored by known virus types. A comparative metagenomic analysis approach identified a set of conserved, yet uncharacterized BSL protein sequences that are commonly found in other similar and dissimilar environments.New sequence data from metagenomic surveys of natural virus assemblages was also used to better characterize and define known virus protein families, as some of the viruses found in the BSL environment represent distant relatives of well-characterized isolates. By comparing viral genes and protein sequences from these highly divergent species, it is possible to better understand the dynamics of adaptation and evolution in the virosphere. Additionally, as structures of virus proteins continue to be experimentally determined by X-ray crystallography and cryo-electron microscopy, a merger of structural and metagenomic sequence data allows the opportunity to observe the structural dynamics underlying virus protein evolution.Capsid (structural) proteins from two distinct Microviridae strains; a globally ubiquitous and highly sequence-diverse virus family, were identified in, and isolated from the BSL metagenomic DNA sample. These BSL capsid protein sequences, along with several other homologous sequences derived from metagenomic surveys and laboratory isolates, were mapped to the solved structure of a closely related capsid protein from the Spiroplasma phage-4 microvirus. Patterns of amino acid sequence conservation, unveiled by structure-based homology modeling analysis, revealed that the protein sequences within this family exhibit a remarkable level of plasticity, while remaining structurally and functionally congruent.Lateral gene transfer is thought to have had a significant impact on the genomic evolution and adaptation of virus families. Genomic context analysis was also utilized to identify interviral gene transfer within the BSL virus assemblage. An ostensibly rare interviral gene transfer event, having transpired between single-stranded RNA and DNA virus types, was detected in the BSL metagenome. Similar genomes were subsequently detected in other ecosystems around the globe. The discovery of this new virus genome dramatically underscores the scope and importance of genetic mobility and genomic mosaicism as major forces driving the evolution of viruses.The analyses conducted herein demonstrate the many ways in which viral metagenomic sequence data may be utilized to not only evaluate the composition of a natural virus assemblage, but to discover new viral genes, and to better understand the dynamics of both genomic and structural evolution within the virosphere. Close

• 31. [Article] Disequilibrium of Fire-prone Forests Sets the Stage for a Rapid Decline in Conifer Dominance during the 21st Century

  As trees are long-lived organisms, the impacts of climate change on forest communities may not be apparent on the time scale of years to decades. While lagged responses to environmental change are common ...

  Citation × Citation Citation Abstract Copy Title: Disequilibrium of Fire-prone Forests Sets the Stage for a Rapid Decline in Conifer Dominance during the 21st Century Author: Serra-Diaz, Josep M., Maxwell, Charles, Lucash, Melissa S., Scheller, Robert M., Laflower, Danelle M., Miller, Adam D., Tepley, Alan J., Epstein, Howard E., Anderson-Teixeira, Kristina J., Thompson, Jonathan R. Year: 2017 As trees are long-lived organisms, the impacts of climate change on forest communities may not be apparent on the time scale of years to decades. While lagged responses to environmental change are common in forested systems, potential for abrupt transitions under climate change may occur in environments where alternative vegetation states are influenced by disturbances, such as fire. The Klamath mountains (northern California and southwest Oregon, USA) are currently dominated by carbon rich and hyper-diverse temperate conifer forests, but climate change could disrupt the mechanisms promoting forest stability– regeneration and fire tolerance— via shifts in the fire regime in conjunction with lower fitness of conifers under a hotter climate. Understanding how this landscape will respond to near-term climate change (before 2100) is critical for predicting potential climate change feedbacks and to developing sound forest conservation and management plans. Using a landscape simulation model, we estimate that 1/3 of the Klamath could transition from conifer forest to shrub/hardwood chaparral, triggered by an enhanced fire activity coupled with lower post-fire conifer establishment. Such shifts were more prevalent under higher climate change forcing (RCP 8.5) but were also simulated under the climate of 1950-2000, reflecting the joint influences of early warming trends and historical forest legacies. Our results demonstrate that there is a large potential for loss of conifer forest dominance—and associated carbon stocks and biodiversity-- in the Klamath before the end of the century, and that some losses would likely occur even without the influence of climate change. Thus, in the Klamath and other forested landscapes subject to similar feedback dynamics, major ecosystem shifts should be expected when climate change disrupts key stabilizing feedbacks that maintain the dominance of long-lived, slowly regenerating trees. Title: Disequilibrium of Fire-prone Forests Sets the Stage for a Rapid Decline in Conifer Dominance during the 21st Century Author: Serra-Diaz, Josep M., Maxwell, Charles, Lucash, Melissa S., Scheller, Robert M., Laflower, Danelle M., Miller, Adam D., Tepley, Alan J., Epstein, Howard E., Anderson-Teixeira, Kristina J., Thompson, Jonathan R. Year: 2017 As trees are long-lived organisms, the impacts of climate change on forest communities may not be apparent on the time scale of years to decades. While lagged responses to environmental change are common in forested systems, potential for abrupt transitions under climate change may occur in environments where alternative vegetation states are influenced by disturbances, such as fire. The Klamath mountains (northern California and southwest Oregon, USA) are currently dominated by carbon rich and hyper-diverse temperate conifer forests, but climate change could disrupt the mechanisms promoting forest stability– regeneration and fire tolerance— via shifts in the fire regime in conjunction with lower fitness of conifers under a hotter climate. Understanding how this landscape will respond to near-term climate change (before 2100) is critical for predicting potential climate change feedbacks and to developing sound forest conservation and management plans. Using a landscape simulation model, we estimate that 1/3 of the Klamath could transition from conifer forest to shrub/hardwood chaparral, triggered by an enhanced fire activity coupled with lower post-fire conifer establishment. Such shifts were more prevalent under higher climate change forcing (RCP 8.5) but were also simulated under the climate of 1950-2000, reflecting the joint influences of early warming trends and historical forest legacies. Our results demonstrate that there is a large potential for loss of conifer forest dominance—and associated carbon stocks and biodiversity-- in the Klamath before the end of the century, and that some losses would likely occur even without the influence of climate change. Thus, in the Klamath and other forested landscapes subject to similar feedback dynamics, major ecosystem shifts should be expected when climate change disrupts key stabilizing feedbacks that maintain the dominance of long-lived, slowly regenerating trees. Close

• 32. [Article] Cephalopod Biodiversity in the Vicinity of Bear Seamount, Western North Atlantic Based on Exploratory Trawling From 2000 to 2014

  Bear Seamount (BSM) is the most inshore seamount in the New England Seamount chain. It is located within the U.S. Exclusive Economic Zone and is contained within the recently established Northeast Canyons ...

  Citation × Citation Citation Abstract Copy Title: Cephalopod Biodiversity in the Vicinity of Bear Seamount, Western North Atlantic Based on Exploratory Trawling From 2000 to 2014 Author: Shea, Elizabeth K., Judkins, Heather, Staudinger, Michelle D., Dimkovikj, Valerie H. Year: 2017 Bear Seamount (BSM) is the most inshore seamount in the New England Seamount chain. It is located within the U.S. Exclusive Economic Zone and is contained within the recently established Northeast Canyons and Seamounts Marine National Monument. In 2000, the National Oceanic and Atmospheric Administration’s (NOAA) National Systematics Laboratory began an exploratory trawling program to document nekton diversity at BSM and its vicinity. Here, we summarize eight exploratory sampling cruises conducted between 2000 and 2014, and describe the cephalopod biodiversity and assemblage structure around BSM. Over the course of 174 deep–midwater and 56 bottom tows, 5088 cephalopods were identified, measured, and documented. In total, 77 species were collected at BSM; 75 species were collected from midwater tows and 28 from benthic tows. Rarefaction curves did not reach an asymptote, suggesting that additional sampling will collect more species. Seventeen species accounted for 75% of the total midwater and bottom catch, including: Illex illecebrosus (n = 605), Magnoteuthis magna (n = 568), Abraliopsis morisii (n = 518), Abralia redfieldi (n = 358), Mastigoteuthis agassizii (n = 336), Histioteuthis reversa (n = 273), Taonius pavo (n = 239), Haliphron atlanticus (n = 195), Brachioteuthis beanii (n = 160), Ornithoteuthis antillarum (n = 153), Pterygioteuthis gemmata (n = 141), Pyroteuthis margaritifera (n = 120), Vampyroteuthis infernalis (n = 101), Chiroteuthis veranyi (n = 33), Bolitaena pygmaea (n = 30), Graneledone verrucosa (n = 11), and Stauroteuthis syrtensis (n = 29). Non-metric multidimensional scaling (NMDS) of significant analysis of similarity (ANOSIM) results showed that the 2000 cruise was different from other years, meteorological winter was different from other seasons, and that day and night shallow samples were different from each other and all other depths. Based on seasonal size variation in the most abundant taxa, we propose hypotheses of year-round, winter, and spring spawning for future critical assessment. This extensive description of the offshore cephalopod assemblage may be used to assess vulnerability to future environmental changes and human activities. Title: Cephalopod Biodiversity in the Vicinity of Bear Seamount, Western North Atlantic Based on Exploratory Trawling From 2000 to 2014 Author: Shea, Elizabeth K., Judkins, Heather, Staudinger, Michelle D., Dimkovikj, Valerie H. Year: 2017 Bear Seamount (BSM) is the most inshore seamount in the New England Seamount chain. It is located within the U.S. Exclusive Economic Zone and is contained within the recently established Northeast Canyons and Seamounts Marine National Monument. In 2000, the National Oceanic and Atmospheric Administration’s (NOAA) National Systematics Laboratory began an exploratory trawling program to document nekton diversity at BSM and its vicinity. Here, we summarize eight exploratory sampling cruises conducted between 2000 and 2014, and describe the cephalopod biodiversity and assemblage structure around BSM. Over the course of 174 deep–midwater and 56 bottom tows, 5088 cephalopods were identified, measured, and documented. In total, 77 species were collected at BSM; 75 species were collected from midwater tows and 28 from benthic tows. Rarefaction curves did not reach an asymptote, suggesting that additional sampling will collect more species. Seventeen species accounted for 75% of the total midwater and bottom catch, including: Illex illecebrosus (n = 605), Magnoteuthis magna (n = 568), Abraliopsis morisii (n = 518), Abralia redfieldi (n = 358), Mastigoteuthis agassizii (n = 336), Histioteuthis reversa (n = 273), Taonius pavo (n = 239), Haliphron atlanticus (n = 195), Brachioteuthis beanii (n = 160), Ornithoteuthis antillarum (n = 153), Pterygioteuthis gemmata (n = 141), Pyroteuthis margaritifera (n = 120), Vampyroteuthis infernalis (n = 101), Chiroteuthis veranyi (n = 33), Bolitaena pygmaea (n = 30), Graneledone verrucosa (n = 11), and Stauroteuthis syrtensis (n = 29). Non-metric multidimensional scaling (NMDS) of significant analysis of similarity (ANOSIM) results showed that the 2000 cruise was different from other years, meteorological winter was different from other seasons, and that day and night shallow samples were different from each other and all other depths. Based on seasonal size variation in the most abundant taxa, we propose hypotheses of year-round, winter, and spring spawning for future critical assessment. This extensive description of the offshore cephalopod assemblage may be used to assess vulnerability to future environmental changes and human activities. Close

• 33. [Article] International Perspectives on Sustainable Agriculture in Cuba

  Since the economic crisis following the collapse of the Soviet Union, Cuba has restructured their agriculture with a greater focus on domestic production of domestically consumed produce, and a dramatic ...

  Citation × Citation Citation Abstract Copy Title: International Perspectives on Sustainable Agriculture in Cuba Author: Smith, B. Danielle Year: 2014 Since the economic crisis following the collapse of the Soviet Union, Cuba has restructured their agriculture with a greater focus on domestic production of domestically consumed produce, and a dramatic reduction of petroleum products in all aspects of food production. This overhaul has included the broad application of what is termed agroecology – agricultural practices which focus on principles of biodiversity and sustainability – and inter-farm cooperation facilitated by the National Association of Small Farmers (ANAP) and Campesino a Campesino. Academics and journalists from within and abroad have critically examined aspects of the novel reforms developed in the country in starkly contrasting terms, as either an impressive example of sustainability in farming meeting human needs, or as an inefficient, bureaucratically bloated attempt to cope with an enduring food crisis in the country. This author speculates that both perspectives have political agendas unrelated to the observable successes or failures of food production in Cuba. The challenge is in finding the common ground between these poles of argument to clarify how Cuba’s agricultural system has shown remarkable success in recovery from crisis, and in modeling sustainable agriculture; and how it is impeded from further success by circumstances such as governmental bureaucracy, social prejudice, and insufficient profit for farmers with which to motivate ingenuity. While both perspectives can provide insight into food production in Cuba, the context of the broader political debate is present in the data and arguments of both critics and proponents of sustainable agriculture in Cuba. Title: International Perspectives on Sustainable Agriculture in Cuba Author: Smith, B. Danielle Year: 2014 Since the economic crisis following the collapse of the Soviet Union, Cuba has restructured their agriculture with a greater focus on domestic production of domestically consumed produce, and a dramatic reduction of petroleum products in all aspects of food production. This overhaul has included the broad application of what is termed agroecology – agricultural practices which focus on principles of biodiversity and sustainability – and inter-farm cooperation facilitated by the National Association of Small Farmers (ANAP) and Campesino a Campesino. Academics and journalists from within and abroad have critically examined aspects of the novel reforms developed in the country in starkly contrasting terms, as either an impressive example of sustainability in farming meeting human needs, or as an inefficient, bureaucratically bloated attempt to cope with an enduring food crisis in the country. This author speculates that both perspectives have political agendas unrelated to the observable successes or failures of food production in Cuba. The challenge is in finding the common ground between these poles of argument to clarify how Cuba’s agricultural system has shown remarkable success in recovery from crisis, and in modeling sustainable agriculture; and how it is impeded from further success by circumstances such as governmental bureaucracy, social prejudice, and insufficient profit for farmers with which to motivate ingenuity. While both perspectives can provide insight into food production in Cuba, the context of the broader political debate is present in the data and arguments of both critics and proponents of sustainable agriculture in Cuba. Close

• 34. [Article] Rapid Change in Shallow Water Fish Species Composition in an Historically Stable Antarctic Environment

  McMurdo Sound, Antarctica, is home to a unique marine biota with an ecology that has evolved in this frigid environment over millions of years. The region is one of the least disturbed, and possibly the ...

  Citation × Citation Citation Abstract Copy Title: Rapid Change in Shallow Water Fish Species Composition in an Historically Stable Antarctic Environment Author: Buckley, Bradley A. Year: 2013 McMurdo Sound, Antarctica, is home to a unique marine biota with an ecology that has evolved in this frigid environment over millions of years. The region is one of the least disturbed, and possibly the last pristine, marine ecosystem on Earth. Here, the results of three seasons of fishing in the shallow nearshore waters of McMurdo Sound are reported. A shift in the composition of small fish species at one site, Inaccessible Island, has been observed in just five years. The shift in shallow water species composition occurred during a period that followed the maturation of a commercial fishery for the Antarctic toothfish, Dissostichus mawsoni Norman, a predator of smaller fish, and the presence of a large iceberg, termed B-15, at the mouth of McMurdo Sound during the early 2000s that trapped the annual sea ice in the area leading to the unusual accrual of multi-year sea ice. The data presented here provide a current record of species composition and physiological condition of small, shallow water fishes at three sites in McMurdo Sound, providing a current baseline for the assessment of future changes wrought by environmental changes and unprecedented fishery pressures in the Ross Sea. Title: Rapid Change in Shallow Water Fish Species Composition in an Historically Stable Antarctic Environment Author: Buckley, Bradley A. Year: 2013 McMurdo Sound, Antarctica, is home to a unique marine biota with an ecology that has evolved in this frigid environment over millions of years. The region is one of the least disturbed, and possibly the last pristine, marine ecosystem on Earth. Here, the results of three seasons of fishing in the shallow nearshore waters of McMurdo Sound are reported. A shift in the composition of small fish species at one site, Inaccessible Island, has been observed in just five years. The shift in shallow water species composition occurred during a period that followed the maturation of a commercial fishery for the Antarctic toothfish, Dissostichus mawsoni Norman, a predator of smaller fish, and the presence of a large iceberg, termed B-15, at the mouth of McMurdo Sound during the early 2000s that trapped the annual sea ice in the area leading to the unusual accrual of multi-year sea ice. The data presented here provide a current record of species composition and physiological condition of small, shallow water fishes at three sites in McMurdo Sound, providing a current baseline for the assessment of future changes wrought by environmental changes and unprecedented fishery pressures in the Ross Sea. Close

• 35. [Article] Rapid and Repeatable Shifts in Life-History Timing of <i>Rhagoletis pomonella</i> (Diptera: Tephritidae) Following Colonization of Novel Host Plants in the Pacific Northwestern United States

  Host shifts of phytophagous insect specialists to novel plants can result in divergent ecological adaptation, generating reproductive isolation and potentially new species. Rhagoletis pomonellafruit flies ...

  Citation × Citation Citation Abstract Copy Title: Rapid and Repeatable Shifts in Life-History Timing of <i>Rhagoletis pomonella</i> (Diptera: Tephritidae) Following Colonization of Novel Host Plants in the Pacific Northwestern United States Author: Mattsson, Monte, Hood, Glen R., Feder, Jeffery L., Ruedas, Luis A. Year: 2015 Host shifts of phytophagous insect specialists to novel plants can result in divergent ecological adaptation, generating reproductive isolation and potentially new species. Rhagoletis pomonellafruit flies in eastern North America underwent a host shift ~160 ya from native downy hawthorn (Crataegus mollis) to introduced, domesticated apple (Malus domestica). Divergent selection on diapause phenology related to the earlier fruiting time of apples versus downy hawthorns resulted in partial allochronic reproductive isolation between the fly races. Here, we test for how rapid and repeatable shifts in life-history timing are driving ecological divergence of R. pomonella in the Pacific Northwestern USA. The fly was introduced into the region via larval-infested apples 40–65 ya and now attacks native black hawthorn (Crataegus douglasii) and introduced ornamental hawthorn (Crataegus monogyna), in addition to early- and late-maturing apple varieties in the region. To investigate the life-history timing hypothesis, we used a field-based experiment to characterize the host-associated eclosion and flight activity patterns of adults, and the feeding times of larvae at a field site in Vancouver, Washington. We also assessed the degree to which differences in host-fruiting time generate allochronic isolation among apple-, black hawthorn-, and ornamental hawthorn-associated fly populations. We conclude that host-associated fly populations are temporally offset 24.4% to 92.6% in their seasonal distributions. Our results imply that R. pomonella possesses the capacity for rapid and repeatable shifts in diapause life history to match host-fruiting phenology, which can generate ecologically based reproductive isolation, and potentially biodiversity in the process. Title: Rapid and Repeatable Shifts in Life-History Timing of <i>Rhagoletis pomonella</i> (Diptera: Tephritidae) Following Colonization of Novel Host Plants in the Pacific Northwestern United States Author: Mattsson, Monte, Hood, Glen R., Feder, Jeffery L., Ruedas, Luis A. Year: 2015 Host shifts of phytophagous insect specialists to novel plants can result in divergent ecological adaptation, generating reproductive isolation and potentially new species. Rhagoletis pomonellafruit flies in eastern North America underwent a host shift ~160 ya from native downy hawthorn (Crataegus mollis) to introduced, domesticated apple (Malus domestica). Divergent selection on diapause phenology related to the earlier fruiting time of apples versus downy hawthorns resulted in partial allochronic reproductive isolation between the fly races. Here, we test for how rapid and repeatable shifts in life-history timing are driving ecological divergence of R. pomonella in the Pacific Northwestern USA. The fly was introduced into the region via larval-infested apples 40–65 ya and now attacks native black hawthorn (Crataegus douglasii) and introduced ornamental hawthorn (Crataegus monogyna), in addition to early- and late-maturing apple varieties in the region. To investigate the life-history timing hypothesis, we used a field-based experiment to characterize the host-associated eclosion and flight activity patterns of adults, and the feeding times of larvae at a field site in Vancouver, Washington. We also assessed the degree to which differences in host-fruiting time generate allochronic isolation among apple-, black hawthorn-, and ornamental hawthorn-associated fly populations. We conclude that host-associated fly populations are temporally offset 24.4% to 92.6% in their seasonal distributions. Our results imply that R. pomonella possesses the capacity for rapid and repeatable shifts in diapause life history to match host-fruiting phenology, which can generate ecologically based reproductive isolation, and potentially biodiversity in the process. Close

• 36. [Article] The Impeccable Timing of the Apple Maggot Fly, <i>Rhagoletis pomonella</i> (Dipetera: Tephritidae), and its Implications for Ecological Speciation

  Speciation is the process by which life diversifies into discrete forms, and understanding its underlying mechanisms remains a primary focus for biologists. Increasingly, empirical studies are helping ...

  Citation × Citation Citation Abstract Copy Title: The Impeccable Timing of the Apple Maggot Fly, <i>Rhagoletis pomonella</i> (Dipetera: Tephritidae), and its Implications for Ecological Speciation Author: Mattsson, Monte Arthur Year: 2015 Speciation is the process by which life diversifies into discrete forms, and understanding its underlying mechanisms remains a primary focus for biologists. Increasingly, empirical studies are helping explain the role of ecology in generating biodiversity. Adaptive radiations are often propelled by selective fitness tradeoffs experienced by individuals that invade new habitats, resulting in reproductive isolation from ancestral conspecifics and potentially cladogenesis. Host specialist insects are among the most speciose organisms known and serve as highly useful models for studying adaptive radiations. We are just beginning to understand the pace and degree with which these insects diversify. The apple maggot, Rhagoletis pomonella, is a well-studied insect whose eastern and southern populations are models for ecological speciation. Recently (40–65 ya), the fly has invaded the Pacific Northwestern United States through human-transported apples infested with larvae. There, populations of R. pomonella have rapidly colonized two novel hawthorn hosts whose fruiting times bracket apple’s (early-season native Crataegus douglasii and introduced C. monogyna, which fruits late in the season). The recent introduction might initiate host shifts, providing opportunities to examine the pace and mechanistic means with which host races (an evolutionary stage preceding speciation) become established. Here, I demonstrate that host-associated populations at a site in southwest Washington are partially allochronically isolated from one another, and life cycles temporally match with natal host fruit ripening times in sympatry. If spatially widespread, these temporal barriers could result in reproductive isolation and possibly cladogenesis. Implications of these findings reach beyond academic import, as R. pomonella is expanding not only its host range, but its geographic range is encroaching upon central Washington, the site of a multi-billion dollar per year apple-growing industry. Title: The Impeccable Timing of the Apple Maggot Fly, <i>Rhagoletis pomonella</i> (Dipetera: Tephritidae), and its Implications for Ecological Speciation Author: Mattsson, Monte Arthur Year: 2015 Speciation is the process by which life diversifies into discrete forms, and understanding its underlying mechanisms remains a primary focus for biologists. Increasingly, empirical studies are helping explain the role of ecology in generating biodiversity. Adaptive radiations are often propelled by selective fitness tradeoffs experienced by individuals that invade new habitats, resulting in reproductive isolation from ancestral conspecifics and potentially cladogenesis. Host specialist insects are among the most speciose organisms known and serve as highly useful models for studying adaptive radiations. We are just beginning to understand the pace and degree with which these insects diversify. The apple maggot, Rhagoletis pomonella, is a well-studied insect whose eastern and southern populations are models for ecological speciation. Recently (40–65 ya), the fly has invaded the Pacific Northwestern United States through human-transported apples infested with larvae. There, populations of R. pomonella have rapidly colonized two novel hawthorn hosts whose fruiting times bracket apple’s (early-season native Crataegus douglasii and introduced C. monogyna, which fruits late in the season). The recent introduction might initiate host shifts, providing opportunities to examine the pace and mechanistic means with which host races (an evolutionary stage preceding speciation) become established. Here, I demonstrate that host-associated populations at a site in southwest Washington are partially allochronically isolated from one another, and life cycles temporally match with natal host fruit ripening times in sympatry. If spatially widespread, these temporal barriers could result in reproductive isolation and possibly cladogenesis. Implications of these findings reach beyond academic import, as R. pomonella is expanding not only its host range, but its geographic range is encroaching upon central Washington, the site of a multi-billion dollar per year apple-growing industry. Close

• 37. [Article] Community level impacts associated with the invasion of English ivy (Hedera spp.) in Forest Park: a look at the impacts of ivy on community composition and soil moisture.

  Invasive species degrade ecosystems by altering natural processes and decreasing the abundance and diversity of native flora. Communities with major fluctuations in resource supply allow invasive species ...

  Citation × Citation Citation Abstract Copy Title: Community level impacts associated with the invasion of English ivy (Hedera spp.) in Forest Park: a look at the impacts of ivy on community composition and soil moisture. Author: Copp, Sara Rose Year: 2014 Invasive species degrade ecosystems by altering natural processes and decreasing the abundance and diversity of native flora. Communities with major fluctuations in resource supply allow invasive species to exploit limiting resources making the community prone to invasion. In the Pacific Northwest, urban forests characterized with limited light and seasonally limited soil moisture are being dominated by nonnative English ivy (Hedera spp). Three observational studies were conducted in the Southern end of Forest Park within the Balch Creek Subwatershed in Portland, Oregon in order to understand 1) how English ivy changes over three growing seasons, 2) how the native understory composition responds to English ivy, 3) if the dominance of English ivy reduces soil moisture to neighboring plants, 4) how English ivy and two co-occurring native herbs (Hydrophyllum tenuipes and Vancouveria hexandra) physiologically respond to seasonal changes in soil moisture. Percent cover of the understory community was collected in both 2010 and 2013 growing seasons in 54 plots in order to understand the change in cover over time. Community response and the relationship with soil moisture was analyzed using percent cover of the understory community and associated environmental variables including soil moisture collected in 128 plots during the 2013 field season. Finally, 15 plots with co-occurring Hedera spp, H. tenuipes and V. hexandra were sampled for stomatal conductance, leaf water potential, and associated environmental variables. Results show ivy cover increases on average 14% between 2010 and 2013 while native understory cover increased on average < 1%. Once ivy forms dense cover over 44% there is a reduction of native richness, diversity and herb cover while also an increase in available soil moisture and deciduous canopy cover. There were disparate impacts to different functional groups and between species. As functional group, the herbaceous community was the most impacted by ivy invasion. The shrubs and fern community had a variable response to ivy invasion. Many of the fern and shrub species least impacted by ivy also had associations with high soil moisture and deciduous canopy cover. Finally, data suggests that ivy does not take advantage of seasonally limiting soil moisture to invade the understory community. This study indicates that English ivy is both efficient at water use and may have the ability to obtain water from distant locations throughout the forest. Once established, ivy has the ability to alter the community composition. Ivy removal and habitat restoration are essential in order to maintain and enhance biodiversity in Forest Park. Title: Community level impacts associated with the invasion of English ivy (Hedera spp.) in Forest Park: a look at the impacts of ivy on community composition and soil moisture. Author: Copp, Sara Rose Year: 2014 Invasive species degrade ecosystems by altering natural processes and decreasing the abundance and diversity of native flora. Communities with major fluctuations in resource supply allow invasive species to exploit limiting resources making the community prone to invasion. In the Pacific Northwest, urban forests characterized with limited light and seasonally limited soil moisture are being dominated by nonnative English ivy (Hedera spp). Three observational studies were conducted in the Southern end of Forest Park within the Balch Creek Subwatershed in Portland, Oregon in order to understand 1) how English ivy changes over three growing seasons, 2) how the native understory composition responds to English ivy, 3) if the dominance of English ivy reduces soil moisture to neighboring plants, 4) how English ivy and two co-occurring native herbs (Hydrophyllum tenuipes and Vancouveria hexandra) physiologically respond to seasonal changes in soil moisture. Percent cover of the understory community was collected in both 2010 and 2013 growing seasons in 54 plots in order to understand the change in cover over time. Community response and the relationship with soil moisture was analyzed using percent cover of the understory community and associated environmental variables including soil moisture collected in 128 plots during the 2013 field season. Finally, 15 plots with co-occurring Hedera spp, H. tenuipes and V. hexandra were sampled for stomatal conductance, leaf water potential, and associated environmental variables. Results show ivy cover increases on average 14% between 2010 and 2013 while native understory cover increased on average < 1%. Once ivy forms dense cover over 44% there is a reduction of native richness, diversity and herb cover while also an increase in available soil moisture and deciduous canopy cover. There were disparate impacts to different functional groups and between species. As functional group, the herbaceous community was the most impacted by ivy invasion. The shrubs and fern community had a variable response to ivy invasion. Many of the fern and shrub species least impacted by ivy also had associations with high soil moisture and deciduous canopy cover. Finally, data suggests that ivy does not take advantage of seasonally limiting soil moisture to invade the understory community. This study indicates that English ivy is both efficient at water use and may have the ability to obtain water from distant locations throughout the forest. Once established, ivy has the ability to alter the community composition. Ivy removal and habitat restoration are essential in order to maintain and enhance biodiversity in Forest Park. Close

• 38. [Article] Understory Diversity and Succession on Coarse Woody Debris in a Coastal, Old-growth Forest, Oregon

  This research examines the relationship between understory plant diversity and logs in a Pacific Northwest (PNW) Sitka spruce (Picea sitchensis)-western hemlock (Tsuga heterophylla) old-growth, coastal ...

  Citation × Citation Citation Abstract Copy Title: Understory Diversity and Succession on Coarse Woody Debris in a Coastal, Old-growth Forest, Oregon Author: Mcdonald, Shannon Lee Year: 2013 This research examines the relationship between understory plant diversity and logs in a Pacific Northwest (PNW) Sitka spruce (Picea sitchensis)-western hemlock (Tsuga heterophylla) old-growth, coastal forest. These forests are renowned for their high forest productivity, frequent wind storms, and slow log decomposition rates that produce unmatched accumulations of coarse woody debris (CWD) yet few studies have examined the relationship between CWD and understory vegetation ecology. My research addressed this topic by comparing understory plant census data between paired fallen log and forest floor sites (n=20 pairs). My objectives were to: 1) determine the influence of substrate type on community composition and diversity, and 2) examine successional pathways and species assemblage patterns on CWD in various stages of decomposition. To meet these objectives I employed non-metric multidimensional scaling (NMDS) ordinations and unsupervised cluster analyses to identify and compare community assemblages on both substrates. These methods revealed similar species diversity and evenness between log and forest floor sites with compositional differences within and between substrates corresponding to habitat availability for colonization and light and moisture gradients. My results also suggest understory successional pathways related to decay class and characterized by an initial abundance of bryophytes, forbs, and seedlings followed by woody shrubs. Understory communities developing on logs also experienced increasing diversity, evenness, and divergence from forest floor communities consistent with log decomposition. These results differ from findings for boreal forests that reveal increasing similarity between substrate communities with increasing decay class. Recommendations for future research include the employment of a more robust sample size and direct measurements of environmental variables. Additional comparator studies are also needed to confirm the effects of forest type and decomposition on the relationship between CWD and forest understory communities. This study demonstrates how fine-scale wind disturbance fosters biodiversity through the creation of CWD substrate. My results and future research are essential for the development of silvicultural models designed to promote biodiversity in PNW coastal forests. Title: Understory Diversity and Succession on Coarse Woody Debris in a Coastal, Old-growth Forest, Oregon Author: Mcdonald, Shannon Lee Year: 2013 This research examines the relationship between understory plant diversity and logs in a Pacific Northwest (PNW) Sitka spruce (Picea sitchensis)-western hemlock (Tsuga heterophylla) old-growth, coastal forest. These forests are renowned for their high forest productivity, frequent wind storms, and slow log decomposition rates that produce unmatched accumulations of coarse woody debris (CWD) yet few studies have examined the relationship between CWD and understory vegetation ecology. My research addressed this topic by comparing understory plant census data between paired fallen log and forest floor sites (n=20 pairs). My objectives were to: 1) determine the influence of substrate type on community composition and diversity, and 2) examine successional pathways and species assemblage patterns on CWD in various stages of decomposition. To meet these objectives I employed non-metric multidimensional scaling (NMDS) ordinations and unsupervised cluster analyses to identify and compare community assemblages on both substrates. These methods revealed similar species diversity and evenness between log and forest floor sites with compositional differences within and between substrates corresponding to habitat availability for colonization and light and moisture gradients. My results also suggest understory successional pathways related to decay class and characterized by an initial abundance of bryophytes, forbs, and seedlings followed by woody shrubs. Understory communities developing on logs also experienced increasing diversity, evenness, and divergence from forest floor communities consistent with log decomposition. These results differ from findings for boreal forests that reveal increasing similarity between substrate communities with increasing decay class. Recommendations for future research include the employment of a more robust sample size and direct measurements of environmental variables. Additional comparator studies are also needed to confirm the effects of forest type and decomposition on the relationship between CWD and forest understory communities. This study demonstrates how fine-scale wind disturbance fosters biodiversity through the creation of CWD substrate. My results and future research are essential for the development of silvicultural models designed to promote biodiversity in PNW coastal forests. Close

• 39. [Article] Social-Ecological Dynamics of Coral Reef Resource Use and Management

  This dissertation investigates social and ecological factors that facilitate effective management of coral reefs as social-ecological systems. Meta-analytical and field-based methods were employed to examine ...

  Citation × Citation Citation Abstract Copy Title: Social-Ecological Dynamics of Coral Reef Resource Use and Management Author: Freed, Sarah J. Year: 2013 This dissertation investigates social and ecological factors that facilitate effective management of coral reefs as social-ecological systems. Meta-analytical and field-based methods were employed to examine current management challenges and identify strategies that improve management effectiveness and coral reef health. A meta-analysis was used to evaluate biological indicators of reef health in relation to the types of fishing regulations in place (no-take areas, gear restriction areas, and periodic closures) and the actor groups (community-based, co-management, state, private) involved in management efforts for coral reef fisheries throughout the world. Other than enhancement of fish biomass within no-take areas that was significantly greater than in gear restriction areas, most biological indicators benefitted similarly from management techniques of no-take areas and gear restriction areas. Community-based and co-management were the best performing management arrangements for some biological outcomes but require further case studies to verify findings. Investigation of management effects by region indicated that previously degraded reefs received fewer benefits from management implementation than did relatively healthier reefs. For field investigations, the Comoros islands in the Western Indian Ocean served as a model for tropical coral reefs with challenging socioeconomic contexts, high biodiversity, and high vulnerability to coral reef degradation. Empirical study at 21 sites was used to identify the relative effects of natural and anthropogenic threats to coral reefs of the Comoros. Most previous studies of reef health focus on primarily natural factors or a single anthropogenic threat. This study examined suites of natural factors and human activities to identify the relative importance of each on reef health. Human activities including fishing, sand extraction, and beachfront housing and development were the best predictors of reef health status. Most notably, human population and fishing predicted fish richness, abundance, and biomass with seasonal variation in the effects, while site orientation strongly predicted benthic cover. Field studies in the Comoros were also used to investigate the roles of community and state actors in co-management and compare effectiveness of comanagement across sites with varying levels of actor participation. Effective management was found to occur with community or `meta-community' (in this case, a Marine Protected Area in which the efforts of several communities were organized) participation in governance and support of state or external agents, while resilient management that overcame considerable challenges was found to occur only with strong community participation and leadership in governance. External agents were found to contribute to development of meta-community governance structure and initiation of community participation through education and capacity building. The findings from these studies reveal that coral reef management can be improved through context appropriate regulations that address detrimental human activities and through wide acceptance and participation in governance with cooperation among states, communities, and external agents. Title: Social-Ecological Dynamics of Coral Reef Resource Use and Management Author: Freed, Sarah J. Year: 2013 This dissertation investigates social and ecological factors that facilitate effective management of coral reefs as social-ecological systems. Meta-analytical and field-based methods were employed to examine current management challenges and identify strategies that improve management effectiveness and coral reef health. A meta-analysis was used to evaluate biological indicators of reef health in relation to the types of fishing regulations in place (no-take areas, gear restriction areas, and periodic closures) and the actor groups (community-based, co-management, state, private) involved in management efforts for coral reef fisheries throughout the world. Other than enhancement of fish biomass within no-take areas that was significantly greater than in gear restriction areas, most biological indicators benefitted similarly from management techniques of no-take areas and gear restriction areas. Community-based and co-management were the best performing management arrangements for some biological outcomes but require further case studies to verify findings. Investigation of management effects by region indicated that previously degraded reefs received fewer benefits from management implementation than did relatively healthier reefs. For field investigations, the Comoros islands in the Western Indian Ocean served as a model for tropical coral reefs with challenging socioeconomic contexts, high biodiversity, and high vulnerability to coral reef degradation. Empirical study at 21 sites was used to identify the relative effects of natural and anthropogenic threats to coral reefs of the Comoros. Most previous studies of reef health focus on primarily natural factors or a single anthropogenic threat. This study examined suites of natural factors and human activities to identify the relative importance of each on reef health. Human activities including fishing, sand extraction, and beachfront housing and development were the best predictors of reef health status. Most notably, human population and fishing predicted fish richness, abundance, and biomass with seasonal variation in the effects, while site orientation strongly predicted benthic cover. Field studies in the Comoros were also used to investigate the roles of community and state actors in co-management and compare effectiveness of comanagement across sites with varying levels of actor participation. Effective management was found to occur with community or `meta-community' (in this case, a Marine Protected Area in which the efforts of several communities were organized) participation in governance and support of state or external agents, while resilient management that overcame considerable challenges was found to occur only with strong community participation and leadership in governance. External agents were found to contribute to development of meta-community governance structure and initiation of community participation through education and capacity building. The findings from these studies reveal that coral reef management can be improved through context appropriate regulations that address detrimental human activities and through wide acceptance and participation in governance with cooperation among states, communities, and external agents. Close

• 40. [Article] Countering Structural Violence: Cultivating an Experience of Positive Peace

  This thesis considers some conflicts involving indigenous peoples that arise from the universal standardization of Intellectual Property Rights (IPRs) over Plant Genetic Resources (PGR). My study presents ...

  Citation × Citation Citation Abstract Copy Title: Countering Structural Violence: Cultivating an Experience of Positive Peace Author: Stiles, Carrie E. Year: 2011 This thesis considers some conflicts involving indigenous peoples that arise from the universal standardization of Intellectual Property Rights (IPRs) over Plant Genetic Resources (PGR). My study presents the research problem of how to include indigenous peoples in dialogue as a prerequisite for conflict transformation. To better understand this problem, and potential solutions, I conducted participatory action research (PAR) through an ethnographic case study of Himalayan farmers working with the grassroots network Navdanya. The study explores the research question: how do Garhwali farmers experience grassroots mobilization for biodiversity and indigenous knowledge (IK) conservation? This question is intended to generate data for conflict resolution analysis on how to engage indigenous peoples in dialogue on the subject of IPRs over PGR. I discuss five themes that emerge from the data collected including: experiences and strategies in grassroots mobilization, culture and sharing, the seed, climate change and women. My research is divided into three separate, but interrelated elements. Firstly, I discuss my methodological choices and experiences. Secondly, I present the ethnographic research, thematic data analysis and draw conclusions. Finally, I frame the literature in the context of the theory of structural violence to explain the significance of conflicts arising from IPRs over PGR in the context of the erosion of IK systems and biodiversity. Title: Countering Structural Violence: Cultivating an Experience of Positive Peace Author: Stiles, Carrie E. Year: 2011 This thesis considers some conflicts involving indigenous peoples that arise from the universal standardization of Intellectual Property Rights (IPRs) over Plant Genetic Resources (PGR). My study presents the research problem of how to include indigenous peoples in dialogue as a prerequisite for conflict transformation. To better understand this problem, and potential solutions, I conducted participatory action research (PAR) through an ethnographic case study of Himalayan farmers working with the grassroots network Navdanya. The study explores the research question: how do Garhwali farmers experience grassroots mobilization for biodiversity and indigenous knowledge (IK) conservation? This question is intended to generate data for conflict resolution analysis on how to engage indigenous peoples in dialogue on the subject of IPRs over PGR. I discuss five themes that emerge from the data collected including: experiences and strategies in grassroots mobilization, culture and sharing, the seed, climate change and women. My research is divided into three separate, but interrelated elements. Firstly, I discuss my methodological choices and experiences. Secondly, I present the ethnographic research, thematic data analysis and draw conclusions. Finally, I frame the literature in the context of the theory of structural violence to explain the significance of conflicts arising from IPRs over PGR in the context of the erosion of IK systems and biodiversity. Close

• 41. [Article] Irrigation, Power, and Salmon: The Case for Voluntary Water Transfers in the Columbia Basin

  This paper begins with a brief history of water law in the west, illustrating the roots of conflict over water allocation. A more detailed examination of activities in the Columbia Basin follows, describing ...

  Citation × Citation Citation Abstract Copy Title: Irrigation, Power, and Salmon: The Case for Voluntary Water Transfers in the Columbia Basin Author: Kuhner, Eric Year: 1996 This paper begins with a brief history of water law in the west, illustrating the roots of conflict over water allocation. A more detailed examination of activities in the Columbia Basin follows, describing the many parties affected by issues of water use and the overlapping institutional structures that govern the river and its water. Sources of pressure to change the current pattern of water use are then considered. These include requirements to protect endangered salmon runs and the change over time in the relative values of water for power production and irrigation. This section demonstrates how changes in the value of resources can create conflict when resource allocations are inflexible. Alternative approaches to water allocation are then detailed. An argument is made that water use on the Columbia should be flexible, and that the ability to transfer water more easily from one use to another would be beneficial. The potential economic, social, and environmental benefits and costs of water transfers are also considered. The final section of the paper looks at barriers to water transfers and recommendations for institutional change. The section offers examples of market structures and policy options that might overcome some of the obstacles to water transfers. The argument for a more flexible system of water allocation is then summarized. Title: Irrigation, Power, and Salmon: The Case for Voluntary Water Transfers in the Columbia Basin Author: Kuhner, Eric Year: 1996 This paper begins with a brief history of water law in the west, illustrating the roots of conflict over water allocation. A more detailed examination of activities in the Columbia Basin follows, describing the many parties affected by issues of water use and the overlapping institutional structures that govern the river and its water. Sources of pressure to change the current pattern of water use are then considered. These include requirements to protect endangered salmon runs and the change over time in the relative values of water for power production and irrigation. This section demonstrates how changes in the value of resources can create conflict when resource allocations are inflexible. Alternative approaches to water allocation are then detailed. An argument is made that water use on the Columbia should be flexible, and that the ability to transfer water more easily from one use to another would be beneficial. The potential economic, social, and environmental benefits and costs of water transfers are also considered. The final section of the paper looks at barriers to water transfers and recommendations for institutional change. The section offers examples of market structures and policy options that might overcome some of the obstacles to water transfers. The argument for a more flexible system of water allocation is then summarized. Close

• 42. [Article] Green Roofs and Urban Biodiversity: Their Role as Invertebrate Habitat and the Effect of Design on Beetle Community

  With over half the world's population now living in cities, urban areas represent one of earth's few ecosystems that are increasing in extent, and are sites of altered biogeochemical cycles, habitat fragmentation, ...

  Citation × Citation Citation Abstract Copy Title: Green Roofs and Urban Biodiversity: Their Role as Invertebrate Habitat and the Effect of Design on Beetle Community Author: Gonsalves, Sydney Marie Year: 2016 With over half the world's population now living in cities, urban areas represent one of earth's few ecosystems that are increasing in extent, and are sites of altered biogeochemical cycles, habitat fragmentation, and changes in biodiversity. However, urban green spaces, including green roofs, can also provide important pools of biodiversity and contribute to regional gamma diversity, while novel species assemblages can enhance some ecosystem services. Green roofs may also mitigate species loss in urban areas and have been shown to support a surprising diversity of invertebrates, including rare and endangered species. In the first part of this study I reviewed the literature on urban invertebrate communities and diversity to better understand the role of green roofs in providing habitat in the context of the larger urban mosaic. My review concluded that, while other factors such as surrounding land use and connectivity are also important to specific invertebrate taxa, local habitat variables contribute substantially to the structure and diversity of urban invertebrate communities. The importance of local habitat variables in urban green spaces and strong support for the habitat complexity hypothesis in a number of other ecosystems has led to proposals that "biodiverse" roofs--those intentionally designed with varied substrate depth, greater plant diversity, or added elements such as logs or stones--would support greater invertebrate diversity, but there is currently limited peer reviewed data to support this. In order to address the habitat complexity hypothesis in the context of green roofs, in the second part of this study I surveyed three roofs designed primarily for stormwater management, three biodiverse roofs, and five ground-level green spaces, from March until September of 2014 in the Portland metropolitan area. Beetles (Coleoptera) were sampled bi-weekly as representatives of total species diversity. Biodiverse roofs had greater richness, abundance, and diversity of beetle species compared to stormwater roofs, but were not more diverse than ground sites. Both biodiverse roofs and ground sites had approximately 20% native beetle species while stormwater roofs had only 5%. Functional diversity was also higher on biodiverse roofs with an average of seven trophic groups represented, while stormwater roofs averaged only three. Ground sites, biodiverse roofs, and stormwater roofs each grouped distinctively in terms of beetle community composition and biodiverse roof communities were found to be positively correlated with roof age, percent plant cover, average plant height, and plant species richness. These results support the findings of previous studies on the importance of local variables in structuring urban invertebrate communities and suggest that biodiverse design can reliably increase greenroof diversity, with the caution that they remain no replacement for ground level conservation. Title: Green Roofs and Urban Biodiversity: Their Role as Invertebrate Habitat and the Effect of Design on Beetle Community Author: Gonsalves, Sydney Marie Year: 2016 With over half the world's population now living in cities, urban areas represent one of earth's few ecosystems that are increasing in extent, and are sites of altered biogeochemical cycles, habitat fragmentation, and changes in biodiversity. However, urban green spaces, including green roofs, can also provide important pools of biodiversity and contribute to regional gamma diversity, while novel species assemblages can enhance some ecosystem services. Green roofs may also mitigate species loss in urban areas and have been shown to support a surprising diversity of invertebrates, including rare and endangered species. In the first part of this study I reviewed the literature on urban invertebrate communities and diversity to better understand the role of green roofs in providing habitat in the context of the larger urban mosaic. My review concluded that, while other factors such as surrounding land use and connectivity are also important to specific invertebrate taxa, local habitat variables contribute substantially to the structure and diversity of urban invertebrate communities. The importance of local habitat variables in urban green spaces and strong support for the habitat complexity hypothesis in a number of other ecosystems has led to proposals that "biodiverse" roofs--those intentionally designed with varied substrate depth, greater plant diversity, or added elements such as logs or stones--would support greater invertebrate diversity, but there is currently limited peer reviewed data to support this. In order to address the habitat complexity hypothesis in the context of green roofs, in the second part of this study I surveyed three roofs designed primarily for stormwater management, three biodiverse roofs, and five ground-level green spaces, from March until September of 2014 in the Portland metropolitan area. Beetles (Coleoptera) were sampled bi-weekly as representatives of total species diversity. Biodiverse roofs had greater richness, abundance, and diversity of beetle species compared to stormwater roofs, but were not more diverse than ground sites. Both biodiverse roofs and ground sites had approximately 20% native beetle species while stormwater roofs had only 5%. Functional diversity was also higher on biodiverse roofs with an average of seven trophic groups represented, while stormwater roofs averaged only three. Ground sites, biodiverse roofs, and stormwater roofs each grouped distinctively in terms of beetle community composition and biodiverse roof communities were found to be positively correlated with roof age, percent plant cover, average plant height, and plant species richness. These results support the findings of previous studies on the importance of local variables in structuring urban invertebrate communities and suggest that biodiverse design can reliably increase greenroof diversity, with the caution that they remain no replacement for ground level conservation. Close

• 43. [Article] Impacts of Fire and Climate Change on Long-Term Nitrogen Availability and Forest Productivity in the New Jersey Pine Barrens

  Increased wildfires and temperatures due to climate change are expected to have profound effects on forest productivity and nitrogen (N) cycling. Forecasts about how wildfire and climate change will affect ...

  Citation × Citation Citation Abstract Copy Title: Impacts of Fire and Climate Change on Long-Term Nitrogen Availability and Forest Productivity in the New Jersey Pine Barrens Author: Lucash, Melissa S., Scheller, Robert M., Kretchun, Alec M., Clark, Kenneth L., Hom, John Year: 2014 Increased wildfires and temperatures due to climate change are expected to have profound effects on forest productivity and nitrogen (N) cycling. Forecasts about how wildfire and climate change will affect forests seldom consider N availability, which may limit forest response to climate change, particularly in fire-prone landscapes. The overall objective of this study was to examine how wildfire and climate change affect long-term mineral N availability in a fire-prone landscape. We employed a commonly used landscape simulation model (LANDIS-II) in the New Jersey Pine Barrens, a landscape characterized by frequent small fires and fire-resilient vegetation. We found that fire had little effect on mineral N, whereas climate change and fire together reduced mineral N by the end of the century. Though N initially limited forest productivity, mineral N was no longer limiting after 50 years. Our results suggest that mineral N is resilient to fire under our current climate but not under climate change. Also, predictions that do not consider N limitation may underestimate short-term but not long-term productivity responses to climate change. Together these results illustrate the importance of including N dynamics when simulating the effects of climate change on forest productivity, particularly in fire-prone regions such as the New Jersey Pine Barrens. Title: Impacts of Fire and Climate Change on Long-Term Nitrogen Availability and Forest Productivity in the New Jersey Pine Barrens Author: Lucash, Melissa S., Scheller, Robert M., Kretchun, Alec M., Clark, Kenneth L., Hom, John Year: 2014 Increased wildfires and temperatures due to climate change are expected to have profound effects on forest productivity and nitrogen (N) cycling. Forecasts about how wildfire and climate change will affect forests seldom consider N availability, which may limit forest response to climate change, particularly in fire-prone landscapes. The overall objective of this study was to examine how wildfire and climate change affect long-term mineral N availability in a fire-prone landscape. We employed a commonly used landscape simulation model (LANDIS-II) in the New Jersey Pine Barrens, a landscape characterized by frequent small fires and fire-resilient vegetation. We found that fire had little effect on mineral N, whereas climate change and fire together reduced mineral N by the end of the century. Though N initially limited forest productivity, mineral N was no longer limiting after 50 years. Our results suggest that mineral N is resilient to fire under our current climate but not under climate change. Also, predictions that do not consider N limitation may underestimate short-term but not long-term productivity responses to climate change. Together these results illustrate the importance of including N dynamics when simulating the effects of climate change on forest productivity, particularly in fire-prone regions such as the New Jersey Pine Barrens. Close

• 44. [Article] Mapping Conservation Opportunity Areas for the Intertwine's Regional Conservation Strategy

  As part of efforts to develop the Regional Conservation Strategy (RCS) for the greater Portland-Vancouver region, Oregon State University’s Institute for Natural Resources (INR) was asked to use spatial ...

  Citation × Citation Citation Abstract Copy Title: Mapping Conservation Opportunity Areas for the Intertwine's Regional Conservation Strategy Author: Burcsu, Theresa, Kagan, James S. Year: 2011 As part of efforts to develop the Regional Conservation Strategy (RCS) for the greater Portland-Vancouver region, Oregon State University’s Institute for Natural Resources (INR) was asked to use spatial modeling to identify conservation opportunity areas (COAs). To complete the project, INR analysts proposed a strategy that would map high value areas using a landscape approach that is focused on relatively high spatial resolution data sets available for the whole metropolitan region. The approach creates 2 main metrics: one focused on terrestrial organisms and the other focused on aquatic and riparian organisms. These are combined to create a map of highly ranked land areas that can be used to formulate a map of conservation opportunity areas. The purpose of the COA mapping project was to use geographic information system methods to identify landscape patches with conservation and restoration potential. The criteria used to identify these high value patches was based on a number of base- and derived-data sets that we call “data inputs.” The data ranged from recently mapped land use and land cover types, hydrological data to indicate species habitat requirements, and road influence on habitat patches. The project identified some areas in which data gaps exist (e.g., region-wide biodiversity data collected and mapped in consistent ways) and some opportunities for improving existent data sets (e.g., land use/land cover map). The project provided several layers that can be used to guide the final Regional Conservation Strategy in selecting conservation opportunity areas. The best layer will depend upon the needs of the RCS efforts, however, in our opinion the most appropriate layer to use is COA 3.11.1 which weights wetlands fairly high, but not as highly as the second data draft. COA 3.10.1 offers similar results as well. Overall it appears that the model results corroborate corridors analysis done previously (Hennings and Soll 2010). There are some issues remaining that we feel can most adequately be addressed by updating the base land use/land cover map. Title: Mapping Conservation Opportunity Areas for the Intertwine's Regional Conservation Strategy Author: Burcsu, Theresa, Kagan, James S. Year: 2011 As part of efforts to develop the Regional Conservation Strategy (RCS) for the greater Portland-Vancouver region, Oregon State University’s Institute for Natural Resources (INR) was asked to use spatial modeling to identify conservation opportunity areas (COAs). To complete the project, INR analysts proposed a strategy that would map high value areas using a landscape approach that is focused on relatively high spatial resolution data sets available for the whole metropolitan region. The approach creates 2 main metrics: one focused on terrestrial organisms and the other focused on aquatic and riparian organisms. These are combined to create a map of highly ranked land areas that can be used to formulate a map of conservation opportunity areas. The purpose of the COA mapping project was to use geographic information system methods to identify landscape patches with conservation and restoration potential. The criteria used to identify these high value patches was based on a number of base- and derived-data sets that we call “data inputs.” The data ranged from recently mapped land use and land cover types, hydrological data to indicate species habitat requirements, and road influence on habitat patches. The project identified some areas in which data gaps exist (e.g., region-wide biodiversity data collected and mapped in consistent ways) and some opportunities for improving existent data sets (e.g., land use/land cover map). The project provided several layers that can be used to guide the final Regional Conservation Strategy in selecting conservation opportunity areas. The best layer will depend upon the needs of the RCS efforts, however, in our opinion the most appropriate layer to use is COA 3.11.1 which weights wetlands fairly high, but not as highly as the second data draft. COA 3.10.1 offers similar results as well. Overall it appears that the model results corroborate corridors analysis done previously (Hennings and Soll 2010). There are some issues remaining that we feel can most adequately be addressed by updating the base land use/land cover map. Close

• 45. [Article] Pine Creek Conservation Area: 2013 Mapping and Monitoring Report

  Pine Creek Conservation Area (PCCA), just northeast of the John Day River in Wheeler County, Oregon, was acquired in 1999-2001 by the Confederate Tribes of Warm Springs with support from the Bonneville ...

  Citation × Citation Citation Abstract Copy Title: Pine Creek Conservation Area: 2013 Mapping and Monitoring Report Author: Nielsen, Eric M., Noone, Matthew D., Kagan, James S., Lee, Matthew T. Year: 2013 Pine Creek Conservation Area (PCCA), just northeast of the John Day River in Wheeler County, Oregon, was acquired in 1999-2001 by the Confederate Tribes of Warm Springs with support from the Bonneville Power Administration (BPA), to mitigate for wildlife losses created by the large, hydropower Columbia River Dams, particularly the Bonneville, Dalles and John Day Dams. Many thousands of acres of grassland, shrub steppe and riparian habitats were lost due to inundation, and the objectives of the acquisition included restoration of similar habitats. As part of an interagency agreement created in 2002, the Oregon Natural Heritage Information Center established a baseline monitoring program in 2002. This effort included the establishment of permanent monitoring plots to allow for a detailed assessment of vegetation change in the plant communities occurring at the site. It also included the development of an existing vegetation map, hopefully to allow for an analysis of overall vegetation change across the conservation area. The map showed the distribution of western juniper, native grasslands, big sagebrush, and weed-dominated areas at the site. In the eight years since the original map was made, a series of management actions, including juniper clearing, prescribed fires, and riparian restoration activities have significantly changed the vegetation at PCCA. In the spring and summer of 2010, the Oregon Natural Heritage Information Center, now the Oregon Biodiversity Information Center at Portland State University, visited the area to assist the land manager in developing a strategy for meeting the information needs of the Tribes and BPA in evaluating the success of the first decade of restoration. This report details that effort, which incorporated a combination of field inspection, photo-interpretation, and remote sensing-based mapping to assess change since the establishment of the conservation area, to lay a new baseline against which to measure future change, and most importantly to provide detailed information useful for land management decision making in the continuing restoration efforts. Title: Pine Creek Conservation Area: 2013 Mapping and Monitoring Report Author: Nielsen, Eric M., Noone, Matthew D., Kagan, James S., Lee, Matthew T. Year: 2013 Pine Creek Conservation Area (PCCA), just northeast of the John Day River in Wheeler County, Oregon, was acquired in 1999-2001 by the Confederate Tribes of Warm Springs with support from the Bonneville Power Administration (BPA), to mitigate for wildlife losses created by the large, hydropower Columbia River Dams, particularly the Bonneville, Dalles and John Day Dams. Many thousands of acres of grassland, shrub steppe and riparian habitats were lost due to inundation, and the objectives of the acquisition included restoration of similar habitats. As part of an interagency agreement created in 2002, the Oregon Natural Heritage Information Center established a baseline monitoring program in 2002. This effort included the establishment of permanent monitoring plots to allow for a detailed assessment of vegetation change in the plant communities occurring at the site. It also included the development of an existing vegetation map, hopefully to allow for an analysis of overall vegetation change across the conservation area. The map showed the distribution of western juniper, native grasslands, big sagebrush, and weed-dominated areas at the site. In the eight years since the original map was made, a series of management actions, including juniper clearing, prescribed fires, and riparian restoration activities have significantly changed the vegetation at PCCA. In the spring and summer of 2010, the Oregon Natural Heritage Information Center, now the Oregon Biodiversity Information Center at Portland State University, visited the area to assist the land manager in developing a strategy for meeting the information needs of the Tribes and BPA in evaluating the success of the first decade of restoration. This report details that effort, which incorporated a combination of field inspection, photo-interpretation, and remote sensing-based mapping to assess change since the establishment of the conservation area, to lay a new baseline against which to measure future change, and most importantly to provide detailed information useful for land management decision making in the continuing restoration efforts. Close

• 46. [Article] Modeling and Mapping in Support of the Regional Conservational Strategy Framework

  Prior to November 2010, when The Intertwine Alliance launched the Regional Conservation Strategy (RCS) and Biodiversity Guide (RBG) efforts for the Portland-Vancouver metropolitan region, conservation ...

  Citation × Citation Citation Abstract Copy Title: Modeling and Mapping in Support of the Regional Conservational Strategy Framework Author: Burcsu, Theresa, Albo, Thomas, Bernert, Joseph, Dimiceli, Jennifer, Kagan, James S., Noone, Matthew D. Year: 2013 Prior to November 2010, when The Intertwine Alliance launched the Regional Conservation Strategy (RCS) and Biodiversity Guide (RBG) efforts for the Portland-Vancouver metropolitan region, conservation priorities in the metropolitan region were identified at a broad regional scale that generally excluded urban areas (e.g., state conservation strategies and Willamette Synthesis); were regional but based solely on expert opinion (e.g., Natural Features); and consisted of localized priorities that abruptly ended at jurisdiction boundaries. The goal of the RCS was to fill in the gaps between broad and local scales of information related to conservation priorities. RCS members envisioned a data-driven approach that could add a regional perspective to local efforts and facilitate cross-scale cooperation toward protecting remaining valuable habitat in the Portland-Vancouver metropolitan region. Also, RCS members expected that the product would complement rather than replace local knowledge, by validating what we know and expanding to areas we know less well. In June 2011, INR completed an initial proof-of-concept product describing high value conservation areas in the Portland-Vancouver region. The product demonstrated a methodology that enabled stakeholder involvement while also being data-driven. In September 2012, we completed a second version of this product that is reported on in this document. While the product is considered complete at this time, it is expected and hoped that the models and data will be updated and improved upon into the future as more and better information becomes available so that the product functions as a "living work" rather than a one-time snapshot in time. Several key products resulted from the project: the High Value Habitat data describing high value terrestrial habitat within the metropolitan region, the Riparian Habitat data describing high value habitat adjacent to streams and rivers, and the high spatial resolution land cover data set describing land cover at a 5 m spatial resolution. Title: Modeling and Mapping in Support of the Regional Conservational Strategy Framework Author: Burcsu, Theresa, Albo, Thomas, Bernert, Joseph, Dimiceli, Jennifer, Kagan, James S., Noone, Matthew D. Year: 2013 Prior to November 2010, when The Intertwine Alliance launched the Regional Conservation Strategy (RCS) and Biodiversity Guide (RBG) efforts for the Portland-Vancouver metropolitan region, conservation priorities in the metropolitan region were identified at a broad regional scale that generally excluded urban areas (e.g., state conservation strategies and Willamette Synthesis); were regional but based solely on expert opinion (e.g., Natural Features); and consisted of localized priorities that abruptly ended at jurisdiction boundaries. The goal of the RCS was to fill in the gaps between broad and local scales of information related to conservation priorities. RCS members envisioned a data-driven approach that could add a regional perspective to local efforts and facilitate cross-scale cooperation toward protecting remaining valuable habitat in the Portland-Vancouver metropolitan region. Also, RCS members expected that the product would complement rather than replace local knowledge, by validating what we know and expanding to areas we know less well. In June 2011, INR completed an initial proof-of-concept product describing high value conservation areas in the Portland-Vancouver region. The product demonstrated a methodology that enabled stakeholder involvement while also being data-driven. In September 2012, we completed a second version of this product that is reported on in this document. While the product is considered complete at this time, it is expected and hoped that the models and data will be updated and improved upon into the future as more and better information becomes available so that the product functions as a "living work" rather than a one-time snapshot in time. Several key products resulted from the project: the High Value Habitat data describing high value terrestrial habitat within the metropolitan region, the Riparian Habitat data describing high value habitat adjacent to streams and rivers, and the high spatial resolution land cover data set describing land cover at a 5 m spatial resolution. Close

• 47. [Article] Increased Harbor Porpoise Mortality in the Pacific Northwest, USA: Understanding When Higher Levels May be Normal

  In 2006, a marked increase in harbor porpoise Phocoena phocoena strandings were reported in the Pacific Northwest of the USA, resulting in the declaration of an unusual mortality event (UME) for Washington ...

  Citation × Citation Citation Abstract Copy Title: Increased Harbor Porpoise Mortality in the Pacific Northwest, USA: Understanding When Higher Levels May be Normal Author: Higgins, Jessica L., Raverty, Stephen A., Norman, Stephanie A., Calambokidis, John, Gaydos, Joseph K., Duffield, Deborah A., Lambourn, Dyanna M., Rice, James M., Hanson, Brad, Wilkinson, Kristin, Jeffries, Steven J., Norberg, Brent, Barre, Lynne Year: 2015 In 2006, a marked increase in harbor porpoise Phocoena phocoena strandings were reported in the Pacific Northwest of the USA, resulting in the declaration of an unusual mortality event (UME) for Washington and Oregon to facilitate investigation into potential causes. The UME was in place during all of 2006 and 2007, and a total of 114 porpoises stranded during this period. Responders examined 95 porpoises; of these, detailed necropsies were conducted on 75 animals. Here we review the findings related to this event and how these compared to the years immediately before and after the UME. Relatively equal numbers among sexes and age classes were represented, and mortalities were attributed to a variety of specific causes, most of which were categorized as trauma or infectious disease. Continued monitoring of strandings during 4 yr following the UME showed no decrease in occurrence. The lack of a single major cause of mortality or evidence of a significant change or event, combined with high levels of strandings over several post- UME years, demonstrated that this was not an actual mortality event but was likely the result of a combination of factors, including: (1) a growing population of harbor porpoises; (2) expansion of harbor porpoises into previously sparsely populated areas in Washington’s inland waters; and (3) a more well established stranding network that resulted in better reporting and response. This finding would not have been possible without the integrated response and investigation undertaken by the stranding network. Title: Increased Harbor Porpoise Mortality in the Pacific Northwest, USA: Understanding When Higher Levels May be Normal Author: Higgins, Jessica L., Raverty, Stephen A., Norman, Stephanie A., Calambokidis, John, Gaydos, Joseph K., Duffield, Deborah A., Lambourn, Dyanna M., Rice, James M., Hanson, Brad, Wilkinson, Kristin, Jeffries, Steven J., Norberg, Brent, Barre, Lynne Year: 2015 In 2006, a marked increase in harbor porpoise Phocoena phocoena strandings were reported in the Pacific Northwest of the USA, resulting in the declaration of an unusual mortality event (UME) for Washington and Oregon to facilitate investigation into potential causes. The UME was in place during all of 2006 and 2007, and a total of 114 porpoises stranded during this period. Responders examined 95 porpoises; of these, detailed necropsies were conducted on 75 animals. Here we review the findings related to this event and how these compared to the years immediately before and after the UME. Relatively equal numbers among sexes and age classes were represented, and mortalities were attributed to a variety of specific causes, most of which were categorized as trauma or infectious disease. Continued monitoring of strandings during 4 yr following the UME showed no decrease in occurrence. The lack of a single major cause of mortality or evidence of a significant change or event, combined with high levels of strandings over several post- UME years, demonstrated that this was not an actual mortality event but was likely the result of a combination of factors, including: (1) a growing population of harbor porpoises; (2) expansion of harbor porpoises into previously sparsely populated areas in Washington’s inland waters; and (3) a more well established stranding network that resulted in better reporting and response. This finding would not have been possible without the integrated response and investigation undertaken by the stranding network. Close

• 48. [Article] Climate Change Effects on Northern Great Lake (USA) Forests: A Case for Preserving Diversity

  Under business as usual (BAU) management, stresses posed by climate change may exceed the ability of Great Lake forests to adapt. Temperature and precipitation projections in the Great Lakes region are ...

  Citation × Citation Citation Abstract Copy Title: Climate Change Effects on Northern Great Lake (USA) Forests: A Case for Preserving Diversity Author: Duveneck, Matthew Joshua, Scheller, Robert M., White, Mark A., Handler, Stephen D., Ravenscroft, Catherine Year: 2014 Under business as usual (BAU) management, stresses posed by climate change may exceed the ability of Great Lake forests to adapt. Temperature and precipitation projections in the Great Lakes region are expected to change forest tree species composition and productivity. It is unknown how a change in productivity and/or tree species diversity due to climate change will affect the relationship between diversity and productivity. We assessed how forests in two landscapes (i.e., northern lower Michigan and northeastern Minnesota, USA) would respond to climate change and explored the diversityproductivity relationship under climate change. In addition, we explored how tree species diversity varied across landscapes by soil type, climate, and management. We used a spatially dynamic forest ecosystem model, LANDIS-II, to simulate BAU forest management under three climate scenarios (current climate, low emissions, and high emissions) in each landscape. We found a positive relationship between diversity and productivity only under a high emissions future as productivity declined. Within landscapes, climate change simulations resulted in the highest diversity in the coolest climate regions and lowest diversity in the warmest climate region in Minnesota and Michigan, respectively. Simulated productivity declined in both landscapes under the high emissions climate scenario as species such as balsam fir (Abies balsamea) declined in abundance. In the Great Lakes region, a high emissions future may decrease forest productivity creating a more positive relationship between diversity and productivity. Maintaining a diversity of tree species may become increasingly important to maintain the adaptive capacity of forests. Title: Climate Change Effects on Northern Great Lake (USA) Forests: A Case for Preserving Diversity Author: Duveneck, Matthew Joshua, Scheller, Robert M., White, Mark A., Handler, Stephen D., Ravenscroft, Catherine Year: 2014 Under business as usual (BAU) management, stresses posed by climate change may exceed the ability of Great Lake forests to adapt. Temperature and precipitation projections in the Great Lakes region are expected to change forest tree species composition and productivity. It is unknown how a change in productivity and/or tree species diversity due to climate change will affect the relationship between diversity and productivity. We assessed how forests in two landscapes (i.e., northern lower Michigan and northeastern Minnesota, USA) would respond to climate change and explored the diversityproductivity relationship under climate change. In addition, we explored how tree species diversity varied across landscapes by soil type, climate, and management. We used a spatially dynamic forest ecosystem model, LANDIS-II, to simulate BAU forest management under three climate scenarios (current climate, low emissions, and high emissions) in each landscape. We found a positive relationship between diversity and productivity only under a high emissions future as productivity declined. Within landscapes, climate change simulations resulted in the highest diversity in the coolest climate regions and lowest diversity in the warmest climate region in Minnesota and Michigan, respectively. Simulated productivity declined in both landscapes under the high emissions climate scenario as species such as balsam fir (Abies balsamea) declined in abundance. In the Great Lakes region, a high emissions future may decrease forest productivity creating a more positive relationship between diversity and productivity. Maintaining a diversity of tree species may become increasingly important to maintain the adaptive capacity of forests. Close

• 49. [Article] Oregon's Fish and Wildlife in a Changing Climate

  Chapter 7 in: The Oregon Climate Change Assessment Report Oregon's fish and wildlife include animals on land, fish and other species in rivers and lakes, and various kinds of sea life in estuaries and ...

  Citation × Citation Citation Abstract Copy Title: Oregon's Fish and Wildlife in a Changing Climate Author: Hixon, Mark A., Gregory, Stanley V., Robinson, W. Douglas, Baker, C. Scott, Batchelder, Harold P., Epps, Clinton, Garcia, Tiffany S., Haig, Susan M., Letelier, Ricardo M., Lytle, David A., Menge, Bruce A., Miller, Jeffery C., Noakes, David L.G., Peterson, William T., Rice, James M., Rumrill, Steven S., Schreck, Carl B., Suryan, Robert M., Sytsma, Mark D., White, Angelicque E. Year: 2010 Chapter 7 in: The Oregon Climate Change Assessment Report Oregon's fish and wildlife include animals on land, fish and other species in rivers and lakes, and various kinds of sea life in estuaries and coastal ocean. Oregon is one of the most ecologically diverse states in the country. The state’s robust biodiversity, some of which is already threatened or endangered -- inhabits complex and dynamic ecosystems that we have only begun to understand, let alone examine in terms of climate change.It is clear that the abundance and distribution of species are shifting already and will shift more rapidly as habitats on land, in freshwater, and in the sea are altered due to increasing temperatures and related environmental changes. It remains to be seen if past changes are all tied to global climate change or if they are a result of some other variability, but they represent a proxy for how species may shift in a warmer climate. Among the observed species changes: Insects are moving in from the south of Oregon, frogs are reproducing earlier in the year and land birds are shifting their distributions northward and migrating earlier. Freshwater fish are losing their cool-water habitats. In the marine environment, algal blooms have increased (figure 11) and the highly predatory Humboldt squid have shifted their distribution from subtropical and tropical regions, making an appearance off the coast of Oregon in the last few years. In a warmer climate, plant and animal species may have to shift upward or northward on land or deeper at sea for survival. Rare or endangered species may become less abundant or extinct; insect pests, invasive species and harmful algal blooms may become more abundant. Declines in the abundance of species may be caused directly by physiological stress related to changes in temperature, water availability, and other environmental shifts, and/or indirectly by habitat degradation and negative interactions with species that are benefited by climate change (diseases, parasites, predators, and competitors). Understanding the responses of Oregon’s fish and wildlife to climate change will require a better understanding of smaller organisms and insects and ocean species. Knowledge of ecological interactions will be crucial for understanding the related effects of climate change (increased predation or competition, for example). Management and natural resource polices that protect intact ecosystems are a tool for adaptation; native species can live and migrate to these safe refugia. Title: Oregon's Fish and Wildlife in a Changing Climate Author: Hixon, Mark A., Gregory, Stanley V., Robinson, W. Douglas, Baker, C. Scott, Batchelder, Harold P., Epps, Clinton, Garcia, Tiffany S., Haig, Susan M., Letelier, Ricardo M., Lytle, David A., Menge, Bruce A., Miller, Jeffery C., Noakes, David L.G., Peterson, William T., Rice, James M., Rumrill, Steven S., Schreck, Carl B., Suryan, Robert M., Sytsma, Mark D., White, Angelicque E. Year: 2010 Chapter 7 in: The Oregon Climate Change Assessment Report Oregon's fish and wildlife include animals on land, fish and other species in rivers and lakes, and various kinds of sea life in estuaries and coastal ocean. Oregon is one of the most ecologically diverse states in the country. The state’s robust biodiversity, some of which is already threatened or endangered -- inhabits complex and dynamic ecosystems that we have only begun to understand, let alone examine in terms of climate change.It is clear that the abundance and distribution of species are shifting already and will shift more rapidly as habitats on land, in freshwater, and in the sea are altered due to increasing temperatures and related environmental changes. It remains to be seen if past changes are all tied to global climate change or if they are a result of some other variability, but they represent a proxy for how species may shift in a warmer climate. Among the observed species changes: Insects are moving in from the south of Oregon, frogs are reproducing earlier in the year and land birds are shifting their distributions northward and migrating earlier. Freshwater fish are losing their cool-water habitats. In the marine environment, algal blooms have increased (figure 11) and the highly predatory Humboldt squid have shifted their distribution from subtropical and tropical regions, making an appearance off the coast of Oregon in the last few years. In a warmer climate, plant and animal species may have to shift upward or northward on land or deeper at sea for survival. Rare or endangered species may become less abundant or extinct; insect pests, invasive species and harmful algal blooms may become more abundant. Declines in the abundance of species may be caused directly by physiological stress related to changes in temperature, water availability, and other environmental shifts, and/or indirectly by habitat degradation and negative interactions with species that are benefited by climate change (diseases, parasites, predators, and competitors). Understanding the responses of Oregon’s fish and wildlife to climate change will require a better understanding of smaller organisms and insects and ocean species. Knowledge of ecological interactions will be crucial for understanding the related effects of climate change (increased predation or competition, for example). Management and natural resource polices that protect intact ecosystems are a tool for adaptation; native species can live and migrate to these safe refugia. Close

• 50. [Article] Planetary Boundaries: Exploring the Safe Operating Space for Humanity

  Anthropogenic pressures on the Earth System have reached a scale where abrupt global environmental change can no longer be excluded. We propose a new approach to global sustainability in which we define ...

  Citation × Citation Citation Abstract Copy Title: Planetary Boundaries: Exploring the Safe Operating Space for Humanity Author: Rockström, Johan, Steffen, W. L., Noone, Kevin, Persson, Åsa, Chapin, F. Stuart, III, Lambin, Eric, Lenton, Timothy M., Scheffer, Marten, Folke, Carl, Schellnhuber, Hans Joachim, Nykvist, Björn, de Wit, Cynthia A., Hughes, Terry, van der Leeuw, Sander, Rodhe, Henning, Sörlin, Sverker, Snyder, Peter K., Costanza, Robert, Svedin, Uno, Falkenmark, Malin, Karlberg, Louise, Corell, Robert W., Fabry, Victoria J., Hansen, James, Walker, Brian, Liverman, Diana, Richardson, Katherine, Crutzen, Paul, Foley, Jonathan Year: 2009 Anthropogenic pressures on the Earth System have reached a scale where abrupt global environmental change can no longer be excluded. We propose a new approach to global sustainability in which we define planetary boundaries within which we expect that humanity can operate safely. Transgressing one or more planetary boundaries may be deleterious or even catastrophic due to the risk of crossing thresholds that will trigger non-linear, abrupt environmental change within continental- to planetary-scale systems. We have identified nine planetary boundaries and, drawing upon current scientific understanding, we propose quantifications for seven of them. These seven are climate change (CO2 concentration in the atmosphere /or a maximum change of +1 W m-2 in radiative forcing); ocean acidification (mean surface seawater saturation state with respect to aragonite ≥ 80% of pre-industrial levels); stratospheric ozone (<5% reduction in O3 concentration from pre-industrial level of 290 Dobson Units); biogeochemical nitrogen (N) cycle (limit industrial and agricultural fixation of N2 to 35 Tg N yr-1) and phosphorus (P) cycle (annual P inflow to oceans not to exceed 10 times the natural background weathering of P); global freshwater use (<4000 km3 yr-1 of consumptive use of runoff resources); land system change (<15% of the ice-free land surface under cropland); and the rate at which biological diversity is lost (annual rate of <10 extinctions per million species). The two additional planetary boundaries for which we have not yet been able to determine a boundary level are chemical pollution and atmospheric aerosol loading. We estimate that humanity has already transgressed three planetary boundaries: for climate change, rate of biodiversity loss, and changes to the global nitrogen cycle. Planetary boundaries are interdependent, because transgressing one may both shift the position of other boundaries or cause them to be transgressed. The social impacts of transgressing boundaries will be a function of the social - ecological resilience of the affected societies. Our proposed boundaries are rough, first estimates only, surrounded by large uncertainties and knowledge gaps. Filling these gaps will require major advancements in Earth System and resilience science. The proposed concept of “planetary boundaries” lays the groundwork for shifting our approach to governance and management, away from the essentially sectoral analyses of limits to growth aimed at minimizing negative externalities, toward the estimation of the safe space for human development. Planetary boundaries define, as it were, the boundaries of the “planetary playing field” for humanity if we want to be sure of avoiding major human-induced environmental change on a global scale. Title: Planetary Boundaries: Exploring the Safe Operating Space for Humanity Author: Rockström, Johan, Steffen, W. L., Noone, Kevin, Persson, Åsa, Chapin, F. Stuart, III, Lambin, Eric, Lenton, Timothy M., Scheffer, Marten, Folke, Carl, Schellnhuber, Hans Joachim, Nykvist, Björn, de Wit, Cynthia A., Hughes, Terry, van der Leeuw, Sander, Rodhe, Henning, Sörlin, Sverker, Snyder, Peter K., Costanza, Robert, Svedin, Uno, Falkenmark, Malin, Karlberg, Louise, Corell, Robert W., Fabry, Victoria J., Hansen, James, Walker, Brian, Liverman, Diana, Richardson, Katherine, Crutzen, Paul, Foley, Jonathan Year: 2009 Anthropogenic pressures on the Earth System have reached a scale where abrupt global environmental change can no longer be excluded. We propose a new approach to global sustainability in which we define planetary boundaries within which we expect that humanity can operate safely. Transgressing one or more planetary boundaries may be deleterious or even catastrophic due to the risk of crossing thresholds that will trigger non-linear, abrupt environmental change within continental- to planetary-scale systems. We have identified nine planetary boundaries and, drawing upon current scientific understanding, we propose quantifications for seven of them. These seven are climate change (CO2 concentration in the atmosphere /or a maximum change of +1 W m-2 in radiative forcing); ocean acidification (mean surface seawater saturation state with respect to aragonite ≥ 80% of pre-industrial levels); stratospheric ozone (<5% reduction in O3 concentration from pre-industrial level of 290 Dobson Units); biogeochemical nitrogen (N) cycle (limit industrial and agricultural fixation of N2 to 35 Tg N yr-1) and phosphorus (P) cycle (annual P inflow to oceans not to exceed 10 times the natural background weathering of P); global freshwater use (<4000 km3 yr-1 of consumptive use of runoff resources); land system change (<15% of the ice-free land surface under cropland); and the rate at which biological diversity is lost (annual rate of <10 extinctions per million species). The two additional planetary boundaries for which we have not yet been able to determine a boundary level are chemical pollution and atmospheric aerosol loading. We estimate that humanity has already transgressed three planetary boundaries: for climate change, rate of biodiversity loss, and changes to the global nitrogen cycle. Planetary boundaries are interdependent, because transgressing one may both shift the position of other boundaries or cause them to be transgressed. The social impacts of transgressing boundaries will be a function of the social - ecological resilience of the affected societies. Our proposed boundaries are rough, first estimates only, surrounded by large uncertainties and knowledge gaps. Filling these gaps will require major advancements in Earth System and resilience science. The proposed concept of “planetary boundaries” lays the groundwork for shifting our approach to governance and management, away from the essentially sectoral analyses of limits to growth aimed at minimizing negative externalities, toward the estimation of the safe space for human development. Planetary boundaries define, as it were, the boundaries of the “planetary playing field” for humanity if we want to be sure of avoiding major human-induced environmental change on a global scale. Close