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1991. [Article] 2009 Borax Lake Chub Investigations Progress Reports 2009
Abstract -- The Borax Lake chub (Gila boraxobius) is a small minnow endemic to Borax Lake and adjacent wetlands in the Alvord Basin in Harney County, Oregon (Williams and Bond 1980). Borax Lake chub are ...Citation Citation
- Title:
- 2009 Borax Lake Chub Investigations Progress Reports 2009
Abstract -- The Borax Lake chub (Gila boraxobius) is a small minnow endemic to Borax Lake and adjacent wetlands in the Alvord Basin in Harney County, Oregon (Williams and Bond 1980). Borax Lake chub are represented by a single population that inhabits a 4.1 hectare geothermally-heated alkaline lake. Borax Lake is a natural lake perched 10 meters above the desert floor on sinter deposits, which is fed almost exclusively by thermal groundwater. The Borax Lake chub was listed as endangered under the federal Endangered Species Act in 1982 (U.S. Fish and Wildlife Service 1982). Population abundance estimates obtained since 1991 indicate a fluctuating population ranging between approximately 4,000 and 34,000 fish (Salzer 1997; Scheerer and Jacobs 2008). The basis for the Borax Lake chub’s listed status was not population size, but the security of a very limited, unique, isolated, and vulnerable habitat. Because Borax Lake is situated above salt deposits on the desert floor, alteration of the salt crust shoreline could reduce lake levels and the habitat quantity and quality available to Borax Lake chub. At the time of the listing, Borax Lake was threatened by habitat alteration caused by geothermal energy development and alteration of the lake shore crust to provide irrigation to surrounding pasture lands. The Borax Lake chub federal recovery plan, completed in 1987, advocated protection of the lake ecosystem through the acquisition of key private lands, protection of groundwater and surface waters, controls on access, and the removal of livestock grazing (U.S. Fish and Wildlife Service 1987). Recovery measures implemented since listing have improved the conservation status of Borax Lake chub and protection of its habitat (Williams and Macdonald 2003). When the species was listed, critical habitat was designated on 259 hectares of land surrounding the lake, including 129 hectares of public lands and two 65-hectare parcels of private land. In 1983, the U.S. Bureau of Land Management designated the public land as an Area of Critical Environmental Concern. The Nature Conservancy began leasing the private lands in 1983 and purchased them in 1993, bringing the entire critical habitat into public or conservation ownership. The Nature Conservancy ended water diversion from the lake for irrigation and livestock grazing within the critical habitat. Passage of the Steens Mountain Cooperative Management and Protection Act of 2000 removed the public BLM lands from mineral and geothermal development within a majority of the basin. These actions, combined with detailed studies of the chub and their habitat, have added substantially to our knowledge of the Borax Lake ecosystem (Scoppettone et al. 1995, Salzer 1992, Perkins et al. 1996). However, three primary threats remain. These include the threat to the fragile lake shoreline, wetlands, and soils from a recent increase in recreational use around the lake (particularly off-road vehicle usage), the threat of introduction of nonnative species, and potential negative impacts to the aquifer from geothermal groundwater withdrawal if groundwater pumping were to occur on private lands outside the protected areas (Williams and Macdonald 2003). A review of the conservation status of the Borax Lake chub by Williams and Macdonald (2003) cited the lack of recent and ongoing population and ecosystem monitoring as one argument against downlisting or delisting the species at that time. Although an increase in abundance is not a goal in the successful recovery of this species, monitoring trends in abundance over time is an important management tool to assess species status. The objectives of this study were to: 1) obtain a mark-recapture population estimate of Borax Lake chub and 2) to evaluate habitat conditions at Borax Lake, including the condition of the fragile lake shoreline and outflows. This report describes results from monitoring conducted by Oregon Department of Fish and Wildlife’s Native Fish Investigations Project in 2009.
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1992. [Article] 2006 Oregon Chub Investigations Progress Reports 2006
Abstract -- Oregon chub Oregonichthys crameri, small minnows endemic to the Willamette Valley, were federally listed as endangered under the Endangered Species Act in 1993. Factors implicated in the decline ...Citation Citation
- Title:
- 2006 Oregon Chub Investigations Progress Reports 2006
Abstract -- Oregon chub Oregonichthys crameri, small minnows endemic to the Willamette Valley, were federally listed as endangered under the Endangered Species Act in 1993. Factors implicated in the decline of this species include changes in flow regimes and habitat characteristics resulting from the construction of flood control dams, revetments, channelization, diking, and the drainage of wetlands. The Oregon chub is further threatened by predation and competition by non-native species such as largemouth bass Micropterus salmoides, crappies Pomoxis sp., sunfishes Lepomis sp., bullheads Ameiurus sp., and western mosquitofish Gambusia affinis. We continued surveys initiated in 1991 in the Willamette River drainage to quantify the abundance of known Oregon chub populations, search for unknown populations, evaluate potential introduction sites, and monitor introduced populations as part of the implementation of the Oregon Chub Recovery Plan. We sampled a total of 103 sites in 2006. No new populations of Oregon chub were discovered. Thirty-five of the 103 sites were new locations that were sampled for the first time in 2006. Sixty-eight sites, sampled on at least one occasion between 1991-2005, were revisited. We confirmed the continued existence of Oregon chub at 33 locations. These included 23 naturally occurring and 10 introduced populations. Locations of naturally occurring populations were: Santiam drainage (Geren Island, Santiam I-5 Side Channels, Santiam Conservation Easement, Stayton Public Works Pond, Green’s Bridge Backwater, Pioneer Park, Santiam Conservation Easement, and Gray Slough), Mid-Willamette drainage (Finley Gray Creek Swamp), McKenzie drainage (Shetzline Pond and Big Island), Coast Fork Willamette drainage (Coast Fork Side Channels and Lynx Hollow), and the Middle Fork Willamette drainage (two Dexter Reservoir alcoves, East Fork Minnow Creek Pond, Shady Dell Pond, Buckhead Creek, two Elijah Bristow State Park sloughs and an island pond, Barnhard Slough, and Hospital Pond). Introduced populations were located in the Middle Fork Willamette (Wicopee Pond and Fall Creek Spillway Ponds), Santiam (Foster Pullout Pond), McKenzie (Russell Pond), Coast Fork Willamette (Herman Pond), and Mid-Willamette drainages (Dunn Wetland, Finley Display Pond, Finley Cheadle Pond, Ankeny Willow Marsh, and Jampolsky Wetlands). We did not find Oregon chub at 14 locations where they were collected on at least one occasion between 1991-2005 (Jasper Park Slough, Wallace Slough, East Ferrin Pond, Dexter East Alcove, Hospital Impoundment Pond, Rattlesnake Creek, Elijah Bristow Large Gravel Pit, Elijah Bristow Small Gravel Pit, Little Muddy Creek tributary, Bull Run Creek, Camas Swale, Barnhard Slough, Camous Creek, and Dry Muddy Creek). Nonnative fish were collected at most of these locations. We obtained abundance estimates of naturally occurring populations of Oregon chub at 18 locations in the Middle Fork Willamette (East Fork Minnow Creek Pond, Shady Dell Pond, Elijah Bristow State Park Sloughs and Island Pond, Hospital Pond, Dexter Reservoir Alcoves, Haws Pond, and Buckhead Creek), Santiam (Geren Island, Gray Slough, Stayton Public Works Pond, Pioneer Park Pond, and Santiam I-5 Side Channels), McKenzie (Big Island and Shetzline Pond), and Mid-Willamette drainages (Finley Gray Creek) (Table 1). We obtained abundance estimates for 10 introduced populations of Oregon chub, located in Fall Creek Spillway Ponds, Wicopee Pond, Dunn Wetland Ponds, Finley Display Pond, Finley Cheadle Pond, Ankeny Willow Marsh, Jampolsky Wetlands, Foster Pullout Pond, Herman Pond, and Russell Pond. The three largest populations in 2006 were introduced populations. In addition, we evaluated eleven potential Oregon chub introduction sites in the Willamette River drainage. We introduced Oregon chub into the South Stayton Pond, a recently restored site located on ODFW property in the Santiam drainage, from Stayton Public Works Pond and Pioneer Park Pond. The Oregon Chub Recovery Plan (U.S. Fish and Wildlife Service 1998) set recovery criteria for downlisting the species to “threatened” and for delisting the species. The criteria for downlisting the species are: 1) establish and manage 10 populations of at least 500 adult fish, 2) all of these populations must exhibit a stable or increasing trend for five years, and 3) at least three populations meeting criterion 1 and 2 must be located in each of the three recovery areas (Middle Fork Willamette River, Santiam River, and Mid-Willamette River tributaries). In 2006, there were 18 populations totaling 500 or more individuals (Table 1). Thirteen of these populations also met the second criteria. Of the 13 populations meeting criteria 1 and 2, eight were located in the Middle Fork Willamette drainage, three were located in the Mid-Willamette drainage, and two were located in the Santiam drainage. With the addition of one more stable population in the Santiam drainage, the downlisting criteria will be met. Findings to date indicate that Oregon chub remain at risk due to the loss of suitable habitat and the continued threats posed by the proliferation of non-native fishes, illegal water withdrawals, accelerated sedimentation, and potential chemical spills or careless pesticide applications. Their status has improved in recent years, resulting primarily from successful introductions and the discovery of previously undocumented populations.
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1993. [Article] 2007 Oregon Chub Investigations Progress Reports 2007
Abstract -- Oregon chub Oregonichthys crameri, small minnows endemic to the Willamette Valley, were federally listed as endangered under the Endangered Species Act in 1993. Factors implicated in the decline ...Citation Citation
- Title:
- 2007 Oregon Chub Investigations Progress Reports 2007
Abstract -- Oregon chub Oregonichthys crameri, small minnows endemic to the Willamette Valley, were federally listed as endangered under the Endangered Species Act in 1993. Factors implicated in the decline of this species include changes in flow regimes and habitat characteristics resulting from the construction of flood control dams, revetments, channelization, diking, and the drainage of wetlands. The Oregon chub is further threatened by predation and competition by non-native species such as largemouth bass Micropterus salmoides, crappies Pomoxis sp., sunfishes Lepomis sp., bullheads Ameiurus sp., and western mosquitofish Gambusia affinis. We continued surveys initiated in 1991 in the Willamette River drainage to quantify the abundance of known Oregon chub populations, search for unknown populations, evaluate potential introduction sites, and monitor introduced populations as part of the implementation of the Oregon Chub Recovery Plan. We sampled a total of 70 sites in 2007. New populations of Oregon chub were discovered at Green Island in the lower McKenzie River and in the Muddy Creek drainage (Linn County). We confirmed the continued existence of Oregon chub at 34 locations. These included 23 naturally occurring and 11 introduced populations. We did not find Oregon chub at nine locations where they were collected on at least one occasion between 1991-2006. Nonnative fish were collected at most of these locations. We obtained abundance estimates of 18 naturally occurring populations and 11 introduced populations of Oregon chub located in the Middle Fork Willamette, Santiam, McKenzie, and Mid-Willamette drainages (Table 1). We introduced additional Oregon chub into the South Stayton Pond in the Santiam drainage and into Cheadle and Display Ponds in the Mid-Willamette drainage. The Oregon Chub Recovery Plan (U.S. Fish and Wildlife Service 1998) set recovery criteria for downlisting the species to “threatened” and for delisting the species. The criteria for downlisting the species are: 1) establish and manage 10 populations of at least 500 adult fish, 2) all of these populations must exhibit a stable or increasing trend for five years, and 3) at least three populations meeting criterion 1 and 2 must be located in each of the three recovery areas (Middle Fork Willamette River, Santiam River, and Mid-Willamette River tributaries). In 2007, there were 20 populations totaling 500 or more individuals (Table 1). Fifteen of these populations also met the second criteria. Of the 15 populations meeting criteria 1 and 2, eight were located in the Middle Fork Willamette drainage, four were located in the Mid-Willamette drainage, and three were located in the Santiam drainage. In 2007, we met the downlisting criteria. Findings to date indicate that Oregon chub remain at risk due to the loss of suitable habitat and the continued threats posed by the proliferation of non-native fishes, illegal water withdrawals, accelerated sedimentation, and potential chemical spills or careless pesticide applications. Their status has improved in recent years, resulting primarily from successful introductions and the discovery of previously undocumented populations.
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1994. [Article] Passage behavior of radio-tagged yearling chinook salmon and steelhead at Bonneville Dam associated with the Surface Bypass Program, 2000
Abstract -- In 1994, the U.S. Army Corps of Engineers (COE) initiated a program to develop and evaluate surface-oriented juvenile salmonid bypass systems at hydroelectric dams on the Columbia and Snake ...Citation Citation
- Title:
- Passage behavior of radio-tagged yearling chinook salmon and steelhead at Bonneville Dam associated with the Surface Bypass Program, 2000
Abstract -- In 1994, the U.S. Army Corps of Engineers (COE) initiated a program to develop and evaluate surface-oriented juvenile salmonid bypass systems at hydroelectric dams on the Columbia and Snake rivers. The goal of the program was to develop juvenile bypass systems that would significantly improve the passage efficiency and survival of juvenile salmonids during their downstream migration. In 1998 a prototype surface collector (PSC) was installed at Bonneville Dam's first powerhouse. The PSC was designed not to bypass fish around the turbines but rather to examine fish behavior and hydraulics at the entrances and to determine the efficacy of surface bypass at BI before building a full production surface bypass system. In 1998 and 1999, our radio telemetry evaluation indicated that only 27-49% of the fish that came within 6 m of the entrances entered the PSC. We also determined that a 6 m entrance width was more efficient than a 1.5 m entrance width. In 2000, the PSC was extended to include turbines 1-6 and each of the six entrances was 6 m wide. To continue our evaluation of the PSC in 2000, we used radio telemetry to examine the movements and behavior of subyearling chinook salmon Oncorhynchus tshawytscha in the forebay of Bonneville Dam. The objectives of this research were to: 1) determine the behavior, distribution, and approach patterns of subyearling chinook salmon in the forebay areas of Bonneville Dam; 2) determine the time and route of dam passage of sub yearling chinook salmon; 3) determine movement patterns and behavior of subyearling chinook salmon in the vicinity of the PSC; and 4) assess the efficiency and effectiveness of the PSC. From 25 April to 1 June 2000, we radio-tagged and released 1,193 juvenile hatchery steelhead and 2,075 yearling chinook salmon. These fish were released from four locations upstream of Bonneville Dam: Rock Creek, John Day Dam, The Dalles Dam, and Hood River, Oregon. Median travel times from release to Bonneville Dam ranged from 14 h to 76 h, depending on species and the location of release. Of all the fish released, we detected 80% of steelhead and 82% of chinook salmon at Bonneville Dam. Of the fish released at Hood River, we detected 95% of steelhead and 94% of chinook salmon. Median residence time in the forebay areas of Bonneville Dam ranged from 8 min to 9 .7 h, depending on species and forebay area. Discharge rates and die! periods effected residence times of both species. Passage routes were determined for 91 % of steelhead and 92% of chinook salmon detected at Bonneville Dam. Nearly half ( 49%) of steelhead passed at powerhouse one (BI), and the largest proportion ( 44%) of chinook salmon passed through the spillway. Thirty-four percent of steelhead detected at Bonneville Dam passed through the spillway. Of the steelhead that passed at Bl, 44% passed into the sluiceway, 33% were guided into the downstream migration channel (DSM) via the standard-length submersible traveling screens (STS) or extended-length submersible bar screens (ESBS), and 23% were unguided and passed directly through the turbines. Of the chinook salmon that passed at Bl, 29% passed into the sluiceway, 36% were guided into the DSM, and 35% were unguided and passed directly through the turbines. Of the fish that passed at B2, 55% of steelhead and 39% of chinook salmon were guided into the DSM by the STS and 45% of steelhead and 60% of chinook salmon passed through the turbines unguided. No steelhead and 1 % of chinook salmon were detected passing through the sluice chute at B2, which was minimally operated during spring 2000. Passage rates were highest for both species during the day at the spillway and B 1. However, passage rates were highest for both species during the night at B2. Of the fish that entered the Bl forebay, 74% of steelhead and 63% of chinook sahnon were detected within 6 m of the PSC and were therefore considered to have discovered the PSC. Of the fish that discovered the PSC, 60% of steelhead and 72% of chinook salmon entered the PSC. However, of the fish that entered the PSC, only 29% (61 of 214) of steelhead and 41 % (100 of 246) of chinook salmon entered the PSC via the entrance they were first detected at without meandering to one or more entrances. Therefore, of the fish that entered the PSC, 71 % (153 of214) of steelhead and 59% (146 of 246) of chinook salmon meandered to one or more entrances before entering the PSC. In relation to units 1-6 at B 1, the PSC was quite efficient at collecting fish. Of the fish that passed at units 1-6 (guided and unguided) 83% of steelhead and 78% of chinook salmon entered the PSC. The PSC was also relatively effective compared to water passing into the turbines and the spillway. An effectiveness of 2.5 for steelhead and 2.4 for chinook salmon indicated that the proportion of fish that entered the PSC out of total passage at units 1-6 was over twice as high as the proportion of discharge that entered the PSC out of total discharge into and under the PSC at units 1-6. When compared to spillway effectiveness (1.0 for steelhead and 1.3 for chinook salmon), PSC effectiveness was about twice as high. Since fish that entered the PSC could pass through other routes, the PSC was not considered an actual passage route for purposes of calculating passage metrics such as FPE. However, if the PSC were an actual passage route, FPE would have increased from 78% to 85% for steelhead and from 73% to 78% for chinook salmon.
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1995. [Article] Downstream rearing of juvenile Chinook salmon abundance, distribution and growth in the Upper Mainstem of the John Day River
Abstract -- Juvenile spring Chinook (Oncorhynchus tshawytscha) emerge from the gravel in the late winter or early spring, and most follow a life history pattern known as Natal Reach Rearing (NRR) in which ...Citation Citation
- Title:
- Downstream rearing of juvenile Chinook salmon abundance, distribution and growth in the Upper Mainstem of the John Day River
Abstract -- Juvenile spring Chinook (Oncorhynchus tshawytscha) emerge from the gravel in the late winter or early spring, and most follow a life history pattern known as Natal Reach Rearing (NRR) in which juvenile fish remain in the stream reaches where they were spawned until their second spring of life when they start migrating towards the ocean (Healey 1991). However, in Columbia River tributaries, some juveniles have been observed following a Downstream Rearing (DSR) life history, in which they start moving downstream during their first spring towards other nursery habitats or perhaps ocean rearing (Copeland & Venditti 2009; Schroeder et al. 2016). Rearing in different habitats during their first year gives fish with these two life histories access to diverse food resources and, it is hypothesized that, this leads to different survival and growth advantages for these two groups. Differences in growth are of interest in efforts to conserve this threatened species because size is positively correlated to survival for salmon across multiple stages of their life cycle (Groot & Margolis 1991; Healey 1991; Quinn & Peterson 1996; Roni et al. 2012) Chinook salmon in the upper John Day River, Oregon, exhibit both NRR and DSR life history patterns. Fish following the DSR life history pattern are larger than NRR fish late in the spring, possibly due to factors such as higher fish density, lower stream productivity, and colder water temperatures in their natal reach than in the downstream reaches. However, this size advantage may be lost due to adverse summer conditions. Hot summer days combined with the withdrawal of water for agriculture lead to stream water temperatures well above lethal thresholds for salmon in many downstream reaches. DSR fish have been observed in tributaries of the mainstem John Day River, however their growth and survival during summer is unknown.
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1996. [Article] Escapement and Productivity of Summer Steelhead and Spring Chinook Salmon in the John Day River; Annual Report 2017
Abstract -- The John Day River, located in northeastern Oregon, supports five wild populations of summer steelhead (Oncorhynchus mykiss) and three populations of wild spring chinook (Oncorhynchus tschawytscha) ...Citation Citation
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- Escapement and Productivity of Summer Steelhead and Spring Chinook Salmon in the John Day River; Annual Report 2017
Abstract -- The John Day River, located in northeastern Oregon, supports five wild populations of summer steelhead (Oncorhynchus mykiss) and three populations of wild spring chinook (Oncorhynchus tschawytscha) with no hatchery supplementation. However, these populations remain depressed relative to historic levels. In 1999, the National Marine Fisheries Service (NMFS) listed the Middle Columbia River summer steelhead Distinct Population Segment (DPS), which includes the John Day River Major Population Group (MPG), as threatened under the Endangered Species Act (ESA). Although numerous habitat protection and rehabilitation projects have been implemented within the John Day River basin to improve steelhead and other salmonid freshwater production and survival, it has been difficult to estimate the effectiveness of these projects without a systematic program in place to collect information on the status, trends, and distribution of spawning activity, juvenile salmonids, and aquatic habitat conditions within the basin. Prior to the inception of this project, population and environmental monitoring of steelhead in the basin consisted of a combination of index spawning surveys and periodic monitoring of some status and trend indicators. While index spawning data is useful for drawing inference about long-term trends in adult steelhead abundance, they are limited for determining the status of steelhead escapement or distribution at the population or MPG scale because survey sites are not randomly selected and are likely biased towards streams with higher fish abundance. A broader approach to the monitoring and evaluation of status and trends in anadromous and resident salmonid populations and their habitats was needed to provide data to effectively support restoration efforts and guide alternative future management actions in the basin. The Independent Scientific Review Panel (ISRP) recommended that the region move away from index surveys and embrace probabilistic sampling for most population and habitat monitoring. To meet the ISRP recommendation, the structure and methods employed by the Oregon Plan for Salmon and Watersheds Monitoring Program were extended to the John Day basin. This approach incorporates the sampling strategy of the United States Environmental Protection Agency’s (EPA) Environmental Monitoring and Assessment Program (EMAP). This research effort employs a statistically based and spatially explicit sampling design to answer key monitoring questions, integrate on-going sampling efforts, and improve agency coordination. The current program seeks to integrate project objectives focused on summer steelhead spawning metrics, juvenile salmonid metrics, and aquatic habitat conditions.