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• 21. [Article] Modeling Predator Habitat to Enhance Reintroduction Planning

  Context The success of species reintroduction often depends on predation risk and spatial estimates of predator habitat. The fisher (Pekania pennanti) is a species of conservation concern and populations ...

  Citation × Citation Citation Abstract Copy Title: Modeling Predator Habitat to Enhance Reintroduction Planning Author: Halsey, Shiloh Michael, Zielinski, William J., Scheller, Robert M. Year: 2015 Context The success of species reintroduction often depends on predation risk and spatial estimates of predator habitat. The fisher (Pekania pennanti) is a species of conservation concern and populations in the western United States have declined substantially in the last century. Reintroduction plans are underway, but the ability of the species to establish a selfsustaining population is affected by predation from its primary predator, the bobcat (Lynx rufus). Objectives To develop a habitat model that incorporates both habitat of the focal species and the spatial patterning of predator habitat. To locate areas of densely aggregated habitat that would be suitable for reintroduction. Methods Using camera survey data, we modeled the association between bobcat presence and environmental features using a classification tree. We applied this model to a spatial analysis of fisher habitat and identified reintroduction areas in the southern Washington Cascade Range. Results The classification tree predicted bobcat detection based on elevation and mean tree diameter. The final model identified fisher reintroduction locations primarily in or near existing wilderness areas. Fisher habitat areas identified considering both habitat and predation risk differed from those identified without considering predation. Conclusion Our spatial approach is unique among fisher reintroduction plans by accounting for both resource requirements and risk of predation. It can be used as a template for future reintroduction efforts in other regions and for other species. Using similar models to refine population management and reintroduction should improve the probability of successful population establishment and stability. Title: Modeling Predator Habitat to Enhance Reintroduction Planning Author: Halsey, Shiloh Michael, Zielinski, William J., Scheller, Robert M. Year: 2015 Context The success of species reintroduction often depends on predation risk and spatial estimates of predator habitat. The fisher (Pekania pennanti) is a species of conservation concern and populations in the western United States have declined substantially in the last century. Reintroduction plans are underway, but the ability of the species to establish a selfsustaining population is affected by predation from its primary predator, the bobcat (Lynx rufus). Objectives To develop a habitat model that incorporates both habitat of the focal species and the spatial patterning of predator habitat. To locate areas of densely aggregated habitat that would be suitable for reintroduction. Methods Using camera survey data, we modeled the association between bobcat presence and environmental features using a classification tree. We applied this model to a spatial analysis of fisher habitat and identified reintroduction areas in the southern Washington Cascade Range. Results The classification tree predicted bobcat detection based on elevation and mean tree diameter. The final model identified fisher reintroduction locations primarily in or near existing wilderness areas. Fisher habitat areas identified considering both habitat and predation risk differed from those identified without considering predation. Conclusion Our spatial approach is unique among fisher reintroduction plans by accounting for both resource requirements and risk of predation. It can be used as a template for future reintroduction efforts in other regions and for other species. Using similar models to refine population management and reintroduction should improve the probability of successful population establishment and stability. Close

• 22. [Article] The Importance of Urban Habitat Connectivity and Influence on Native Avian Species and Community Science

  In what ways do small-scale urban backyards contribute to local bird abundance and biodiversity? In what ways might these yards serve as an ‘extension’ of neighboring native forest areas? This project ...

  Citation × Citation Citation Abstract Copy Title: The Importance of Urban Habitat Connectivity and Influence on Native Avian Species and Community Science Author: Gulick, Kristen S. Year: 2017 In what ways do small-scale urban backyards contribute to local bird abundance and biodiversity? In what ways might these yards serve as an ‘extension’ of neighboring native forest areas? This project investigates the contribution that a group of backyards, certified through the Backyard Habitat Certification Program, have in the suburb of Hillsdale, Oregon, which is adjacent to the natural area of Keller Woodland. Backyard owners functioning as citizen or community scientists assisted with conducting residential bird point-counts once a week in each backyard and the natural area. Counts were done for a total of 8 weeks during nesting season to better understand how backyard habitat restoration might affect their habitat especially when in close proximity to a natural area. The goal of the project was to help better understand the beneficial effects of urban gardening using native plants and diverse vegetation structure as this relates to bird species richness, and to explore the importance of community scientist contributions. Although the sample size was small, no significant trends were found, but the involvement of community scientists indicated increased skill, depth of understanding, and increased motivation for all participating backyard habitat owners. More backyards are needed for future research and extension into lower-income neighborhoods would be very beneficial to increase awareness of urban habitat connectivity and the diversity seen in backyard environmental characteristics and yard owner backyard habitat knowledge. A larger sample size could reveal correlations and provide a greater significance in data findings for bird abundance and diversity. A logical extension of this project would be to investigate food-web effects, specifically avian prey species, and smaller green-spaces that are often present in urban neighborhoods in addition to the large green-spaces. Authors: Kristen S. Gulick, Marion Dresner, Nikkie West Presenter: Kristen S. Gulick Title: The Importance of Urban Habitat Connectivity and Influence on Native Avian Species and Community Science Author: Gulick, Kristen S. Year: 2017 In what ways do small-scale urban backyards contribute to local bird abundance and biodiversity? In what ways might these yards serve as an ‘extension’ of neighboring native forest areas? This project investigates the contribution that a group of backyards, certified through the Backyard Habitat Certification Program, have in the suburb of Hillsdale, Oregon, which is adjacent to the natural area of Keller Woodland. Backyard owners functioning as citizen or community scientists assisted with conducting residential bird point-counts once a week in each backyard and the natural area. Counts were done for a total of 8 weeks during nesting season to better understand how backyard habitat restoration might affect their habitat especially when in close proximity to a natural area. The goal of the project was to help better understand the beneficial effects of urban gardening using native plants and diverse vegetation structure as this relates to bird species richness, and to explore the importance of community scientist contributions. Although the sample size was small, no significant trends were found, but the involvement of community scientists indicated increased skill, depth of understanding, and increased motivation for all participating backyard habitat owners. More backyards are needed for future research and extension into lower-income neighborhoods would be very beneficial to increase awareness of urban habitat connectivity and the diversity seen in backyard environmental characteristics and yard owner backyard habitat knowledge. A larger sample size could reveal correlations and provide a greater significance in data findings for bird abundance and diversity. A logical extension of this project would be to investigate food-web effects, specifically avian prey species, and smaller green-spaces that are often present in urban neighborhoods in addition to the large green-spaces. Authors: Kristen S. Gulick, Marion Dresner, Nikkie West Presenter: Kristen S. Gulick Close

• 23. [Article] Community Science and the Ecological Merits of Backyard Habitat Patches and Adjacent Green-Spaces for Urban Avian Species

  In what ways do small-scale urban backyards contribute to local bird abundance and biodiversity? In what ways might these yards serve as an ‘extension’ of neighboring native forest areas? This project ...

  Citation × Citation Citation Abstract Copy Title: Community Science and the Ecological Merits of Backyard Habitat Patches and Adjacent Green-Spaces for Urban Avian Species Author: Gulick, Kristen S., West, Nikkie, Dresner, Marion Year: 2017 In what ways do small-scale urban backyards contribute to local bird abundance and biodiversity? In what ways might these yards serve as an ‘extension’ of neighboring native forest areas? This project investigates the contribution that a group of backyards, certified through the Backyard Habitat Certification Program, have in the suburb of Hillsdale, Oregon, which is adjacent to the natural area of Keller Woodland. Backyard owners functioning as citizen or community scientists assisted with conducting residential bird point-counts once a week in each backyard and the natural area. Counts were done for a total of 8 weeks during nesting season to better understand how backyard habitat restoration might affect their habitat especially when in close proximity to a natural area. The goal of the project was to help better understand the beneficial effects of urban gardening using native plants and diverse vegetation structure as this relates to bird species richness, and to explore the importance of community scientist contributions. Although the sample size was small, no significant trends were found, but the involvement of community scientists indicated increased skill, depth of understanding, and increased motivation for all participating backyard habitat owners. More backyards are needed for future research and extension into lower-income neighborhoods would be very beneficial to increase awareness of urban habitat connectivity and the diversity seen in backyard environmental characteristics and yard owner backyard habitat knowledge. A larger sample size could reveal correlations and provide a greater significance in data findings for bird abundance and diversity. A logical extension of this project would be to investigate food-web effects, specifically avian prey species, and smaller green-spaces that are often present in urban neighborhoods in addition to the large green-spaces. Title: Community Science and the Ecological Merits of Backyard Habitat Patches and Adjacent Green-Spaces for Urban Avian Species Author: Gulick, Kristen S., West, Nikkie, Dresner, Marion Year: 2017 In what ways do small-scale urban backyards contribute to local bird abundance and biodiversity? In what ways might these yards serve as an ‘extension’ of neighboring native forest areas? This project investigates the contribution that a group of backyards, certified through the Backyard Habitat Certification Program, have in the suburb of Hillsdale, Oregon, which is adjacent to the natural area of Keller Woodland. Backyard owners functioning as citizen or community scientists assisted with conducting residential bird point-counts once a week in each backyard and the natural area. Counts were done for a total of 8 weeks during nesting season to better understand how backyard habitat restoration might affect their habitat especially when in close proximity to a natural area. The goal of the project was to help better understand the beneficial effects of urban gardening using native plants and diverse vegetation structure as this relates to bird species richness, and to explore the importance of community scientist contributions. Although the sample size was small, no significant trends were found, but the involvement of community scientists indicated increased skill, depth of understanding, and increased motivation for all participating backyard habitat owners. More backyards are needed for future research and extension into lower-income neighborhoods would be very beneficial to increase awareness of urban habitat connectivity and the diversity seen in backyard environmental characteristics and yard owner backyard habitat knowledge. A larger sample size could reveal correlations and provide a greater significance in data findings for bird abundance and diversity. A logical extension of this project would be to investigate food-web effects, specifically avian prey species, and smaller green-spaces that are often present in urban neighborhoods in addition to the large green-spaces. Close

• 24. [Article] Status of Nutria (Myocastor coypus) Populations in the Pacific Northwest and Development of Associated Control and Management Strategies, with an Emphasis on Metropolitan Habitats

  The nutria (Myocastor coypus) is a semi-aquatic rodent native to South America that was introduced to the Pacific Northwest, USA, in the 1930s. Primary damage categories from this invasive species include ...

  Citation × Citation Citation Abstract Copy Title: Status of Nutria (Myocastor coypus) Populations in the Pacific Northwest and Development of Associated Control and Management Strategies, with an Emphasis on Metropolitan Habitats Author: Sheffels, Trevor Robert Year: 2013 The nutria (Myocastor coypus) is a semi-aquatic rodent native to South America that was introduced to the Pacific Northwest, USA, in the 1930s. Primary damage categories from this invasive species include burrowing and herbivory, resulting in habitat degradation. Nutria have become well-established in metropolitan habitats, and anecdotal information suggests the problem has increased in recent years. However, little regional research on the species has been conducted. The scope of this research, which emphasizes metropolitan habitats, includes three primary foci in relation to nutria populations in the Pacific Northwest: modeling habitat suitability, assessing activity and movement patterns, and identifying and managing negative impacts. Large-scale management of any invasive species requires understanding of the current and potential future population distribution. Cold temperatures have been assumed to be a limiting factor for the geographic distribution of nutria populations, but this assumption had not been explicitly tested. A mechanistic habitat suitability model based on winter temperatures performed well in predicting nutria distribution in the Pacific Northwest and nationally. Regional results suggest nutria currently occupy most accessible suitable habitat. However, coupling the model with future climate change data suggests a much larger suitable habitat zone regionally and nationally in the near future. Management of an invasive species on a local scale requires region-specific information about behavior patterns. Radio-telemetry tracking of local nutria populations in metropolitan habitats suggested higher diurnal activity levels than reported elsewhere. Activity areas were also on the lower end of reported nutria home ranges, suggesting the studied metropolitan wetland sites represent core habitat for nutria in the region. Comparison of two transmitter attachment methods, a neck collar and a tail mount, did not identify a clearly superior attachment method for short-term nutria behavior studies. The presence of nutria in metropolitan habitats in the Pacific Northwest necessitates the need to expand the limited management techniques available for these habitats. Standard Vexar® plastic mesh tubes very effectively mitigated nutria herbivory damage to woody vegetation live stakes planted in a metropolitan habitat restoration site. A recently developed nutria multiple-capture cage trap captured larger nutria and reduced non-target captures compared to a standard cage trap. The design of the multiple-capture trap, however, prevented multiple-capture events because small nutria escaped the trap. This research contributes substantially to previously limited information about nutria in the Pacific Northwest and resulted in several new findings. Climate change modeling provides the first evidence that nutria ranges could expand in the near future. Evaluation of new radio-telemetry methods will benefit future behavior studies. The assessment of new damage prevention tools provides more options for the management of nutria in urban habitats. Management recommendations include creating regional nutria management plans, identifying and targeting priority monitoring regions, finding key stakeholders, focusing on public education, and initiating a pilot control program. Recommendations for research include evaluating effects on native fauna, conducting disease surveys, assessing the extent of damage, continuing habitat suitability analysis, and developing population indices. Title: Status of Nutria (Myocastor coypus) Populations in the Pacific Northwest and Development of Associated Control and Management Strategies, with an Emphasis on Metropolitan Habitats Author: Sheffels, Trevor Robert Year: 2013 The nutria (Myocastor coypus) is a semi-aquatic rodent native to South America that was introduced to the Pacific Northwest, USA, in the 1930s. Primary damage categories from this invasive species include burrowing and herbivory, resulting in habitat degradation. Nutria have become well-established in metropolitan habitats, and anecdotal information suggests the problem has increased in recent years. However, little regional research on the species has been conducted. The scope of this research, which emphasizes metropolitan habitats, includes three primary foci in relation to nutria populations in the Pacific Northwest: modeling habitat suitability, assessing activity and movement patterns, and identifying and managing negative impacts. Large-scale management of any invasive species requires understanding of the current and potential future population distribution. Cold temperatures have been assumed to be a limiting factor for the geographic distribution of nutria populations, but this assumption had not been explicitly tested. A mechanistic habitat suitability model based on winter temperatures performed well in predicting nutria distribution in the Pacific Northwest and nationally. Regional results suggest nutria currently occupy most accessible suitable habitat. However, coupling the model with future climate change data suggests a much larger suitable habitat zone regionally and nationally in the near future. Management of an invasive species on a local scale requires region-specific information about behavior patterns. Radio-telemetry tracking of local nutria populations in metropolitan habitats suggested higher diurnal activity levels than reported elsewhere. Activity areas were also on the lower end of reported nutria home ranges, suggesting the studied metropolitan wetland sites represent core habitat for nutria in the region. Comparison of two transmitter attachment methods, a neck collar and a tail mount, did not identify a clearly superior attachment method for short-term nutria behavior studies. The presence of nutria in metropolitan habitats in the Pacific Northwest necessitates the need to expand the limited management techniques available for these habitats. Standard Vexar® plastic mesh tubes very effectively mitigated nutria herbivory damage to woody vegetation live stakes planted in a metropolitan habitat restoration site. A recently developed nutria multiple-capture cage trap captured larger nutria and reduced non-target captures compared to a standard cage trap. The design of the multiple-capture trap, however, prevented multiple-capture events because small nutria escaped the trap. This research contributes substantially to previously limited information about nutria in the Pacific Northwest and resulted in several new findings. Climate change modeling provides the first evidence that nutria ranges could expand in the near future. Evaluation of new radio-telemetry methods will benefit future behavior studies. The assessment of new damage prevention tools provides more options for the management of nutria in urban habitats. Management recommendations include creating regional nutria management plans, identifying and targeting priority monitoring regions, finding key stakeholders, focusing on public education, and initiating a pilot control program. Recommendations for research include evaluating effects on native fauna, conducting disease surveys, assessing the extent of damage, continuing habitat suitability analysis, and developing population indices. Close

• 25. [Article] Predator Exclosures, Predator Removal, and Habitat Improvement Increase Nest Success of Snowy Plovers in Oregon, USA

  Management to increase reproductive success is commonly used to aid recovery of threatened and endangered species. The Western Snowy Plover (Charadrius nivosus nivosus) breeds from coastal Washington, ...

  Citation × Citation Citation Abstract Copy Title: Predator Exclosures, Predator Removal, and Habitat Improvement Increase Nest Success of Snowy Plovers in Oregon, USA Author: Dinsmore, Stephen J., Lauten, David J., Castelein, Kathleen J., Gaines, Eleanor P., Stern, Mark A. Year: 2014 Management to increase reproductive success is commonly used to aid recovery of threatened and endangered species. The Western Snowy Plover (Charadrius nivosus nivosus) breeds from coastal Washington, USA, to Baja California, Mexico, and in disjunct interior sites. The Pacific coast population is federally listed as Threatened; habitat loss and nest loss to a suite of terrestrial and avian predators are thought to be primary factors limiting population growth in this species. In coastal Oregon, USA, a consortium of state and federal management agencies deployed nest exclosures on active Snowy Plover nests, initiated a lethal predator management program, and conducted local-scale habitat management in an effort to boost local productivity. During 1990–2009, we monitored 1,951 Snowy Plover nests at 9 sites with varying treatments. We examined the effectiveness of 3 types of nest exclosures (large, small, and outfitted with electric wire), predator removal, and habitat management on nest survival. Habitat management to remove invasive grasses and provide more suitable nesting substrate more than doubled nest survival. Predator management or use of any of the 3 types of exclosures also affected nest survival. There appeared to be no additional benefit to using both approaches, but the biological relevance of these findings is unclear because of site differences in treatments applied. Importantly, these management techniques only affected nesting success; their effect on other contributions to population viability (e.g., fledging success) was not correlated with nesting success. This long-term study illustrates the short-term benefits and tradeoffs of using nest exclosures, predator management, and habitat restoration to improve nesting success. Although we gained broader insight into the relative efficacy of common management techniques to improve avian nesting success, we cannot yet determine how improved nest success contributes to population growth. Title: Predator Exclosures, Predator Removal, and Habitat Improvement Increase Nest Success of Snowy Plovers in Oregon, USA Author: Dinsmore, Stephen J., Lauten, David J., Castelein, Kathleen J., Gaines, Eleanor P., Stern, Mark A. Year: 2014 Management to increase reproductive success is commonly used to aid recovery of threatened and endangered species. The Western Snowy Plover (Charadrius nivosus nivosus) breeds from coastal Washington, USA, to Baja California, Mexico, and in disjunct interior sites. The Pacific coast population is federally listed as Threatened; habitat loss and nest loss to a suite of terrestrial and avian predators are thought to be primary factors limiting population growth in this species. In coastal Oregon, USA, a consortium of state and federal management agencies deployed nest exclosures on active Snowy Plover nests, initiated a lethal predator management program, and conducted local-scale habitat management in an effort to boost local productivity. During 1990–2009, we monitored 1,951 Snowy Plover nests at 9 sites with varying treatments. We examined the effectiveness of 3 types of nest exclosures (large, small, and outfitted with electric wire), predator removal, and habitat management on nest survival. Habitat management to remove invasive grasses and provide more suitable nesting substrate more than doubled nest survival. Predator management or use of any of the 3 types of exclosures also affected nest survival. There appeared to be no additional benefit to using both approaches, but the biological relevance of these findings is unclear because of site differences in treatments applied. Importantly, these management techniques only affected nesting success; their effect on other contributions to population viability (e.g., fledging success) was not correlated with nesting success. This long-term study illustrates the short-term benefits and tradeoffs of using nest exclosures, predator management, and habitat restoration to improve nesting success. Although we gained broader insight into the relative efficacy of common management techniques to improve avian nesting success, we cannot yet determine how improved nest success contributes to population growth. Close

• 26. [Article] Climate Change and Land Management Impact Rangeland Condition and Sage-Grouse Habitat in Southeastern Oregon

  Contemporary pressures on sagebrush steppe from climate change, exotic species, wildfire, and land use change threaten rangeland species such as the greater sage-grouse (Centrocercus urophasianus). To ...

  Citation × Citation Citation Abstract Copy Title: Climate Change and Land Management Impact Rangeland Condition and Sage-Grouse Habitat in Southeastern Oregon Author: Creutzburg, Megan K., Henderson, Emilie B., Conklin, David R. Year: 2015 Contemporary pressures on sagebrush steppe from climate change, exotic species, wildfire, and land use change threaten rangeland species such as the greater sage-grouse (Centrocercus urophasianus). To effectively manage sagebrush steppe landscapes for long-term goals, managers need information about the potential impacts of climate change, disturbances, and management activities. We integrated information from a dynamic global vegetation model, a sage-grouse habitat climate envelope model, and a state-and-transition simulation model to project broad-scale vegetation dynamics and potential sage-grouse habitat across 23.5 million acres in southeastern Oregon. We evaluated four climate scenarios, including continuing current climate and three scenarios of global climate change, and three management scenarios, including no management, current management and a sage-grouse habitat restoration scenario. All climate change scenarios projected expansion of moist shrub steppe and contraction of dry shrub steppe, but climate scenarios varied widely in the projected extent of xeric shrub steppe, where hot, dry summer conditions are unfavorable for sage-grouse. Wildfire increased by 26% over the century under current climate due to exotic grass encroachment, and by two- to four-fold across all climate change scenarios as extreme fire years became more frequent. Exotic grasses rapidly expanded in all scenarios as large areas of the landscape initially in semi-degraded condition converted to exotic-dominated systems. Due to the combination of exotic grass invasion, juniper encroachment, and climatic unsuitability for sage-grouse, projected sage-grouse habitat declined in the first several decades, but increased in area under the three climate change scenarios later in the century, as moist shrub steppe increased and rangeland condition improved. Management activities in the model were generally unsuccessful in controlling exotic grass invasion but were effective in slowing woodland expansion. Current levels of restoration treatments were insufficient to prevent some juniper expansion, but increased treatment rates under the restoration scenario maintained juniper near initial levels in priority treatment areas. Our simulations indicate that climate change may have both positive and negative implications for maintaining sage-grouse habitat. Title: Climate Change and Land Management Impact Rangeland Condition and Sage-Grouse Habitat in Southeastern Oregon Author: Creutzburg, Megan K., Henderson, Emilie B., Conklin, David R. Year: 2015 Contemporary pressures on sagebrush steppe from climate change, exotic species, wildfire, and land use change threaten rangeland species such as the greater sage-grouse (Centrocercus urophasianus). To effectively manage sagebrush steppe landscapes for long-term goals, managers need information about the potential impacts of climate change, disturbances, and management activities. We integrated information from a dynamic global vegetation model, a sage-grouse habitat climate envelope model, and a state-and-transition simulation model to project broad-scale vegetation dynamics and potential sage-grouse habitat across 23.5 million acres in southeastern Oregon. We evaluated four climate scenarios, including continuing current climate and three scenarios of global climate change, and three management scenarios, including no management, current management and a sage-grouse habitat restoration scenario. All climate change scenarios projected expansion of moist shrub steppe and contraction of dry shrub steppe, but climate scenarios varied widely in the projected extent of xeric shrub steppe, where hot, dry summer conditions are unfavorable for sage-grouse. Wildfire increased by 26% over the century under current climate due to exotic grass encroachment, and by two- to four-fold across all climate change scenarios as extreme fire years became more frequent. Exotic grasses rapidly expanded in all scenarios as large areas of the landscape initially in semi-degraded condition converted to exotic-dominated systems. Due to the combination of exotic grass invasion, juniper encroachment, and climatic unsuitability for sage-grouse, projected sage-grouse habitat declined in the first several decades, but increased in area under the three climate change scenarios later in the century, as moist shrub steppe increased and rangeland condition improved. Management activities in the model were generally unsuccessful in controlling exotic grass invasion but were effective in slowing woodland expansion. Current levels of restoration treatments were insufficient to prevent some juniper expansion, but increased treatment rates under the restoration scenario maintained juniper near initial levels in priority treatment areas. Our simulations indicate that climate change may have both positive and negative implications for maintaining sage-grouse habitat. Close

• 27. [Article] Impacts of Columbia River Discharge on Salmonid Habitat: 2. Changes in Shallow-Water Habitat

  This is the second part of an investigation that analyzes human alteration of shallow-water habitat (SWH) available to juvenile salmonids in the tidal Lower Columbia River. Part 2 develops a one-dimensional, ...

  Citation × Citation Citation Abstract Copy Title: Impacts of Columbia River Discharge on Salmonid Habitat: 2. Changes in Shallow-Water Habitat Author: Jay, David A., Kukulka, Tobias Year: 2003 This is the second part of an investigation that analyzes human alteration of shallow-water habitat (SWH) available to juvenile salmonids in the tidal Lower Columbia River. Part 2 develops a one-dimensional, subtidal river stage model that explains ~90% of the stage variance in the tidal river. This model and the tidal model developed in part 1 (Kukulka and Jay, 2003) uncouple the nonlinear interaction of river tides and river stage by referring both to external forcing by river discharge, ocean tides, and atmospheric pressure. Applying the two models, daily high-water levels were predicted for a reach from rkm-50 to rkm-90 during 1974 to 1998, the period of contemporary management. Predicted water levels were related to the bathymetry and topography to determine the changes in shallow-water habitat area (SWHA) caused by flood control dikes and altered flow management. Model results suggest that diking and a >40% reduction of peak flows have reduced SWHA by ~62% during the crucial spring freshet period during which juvenile salmon use of SWHA is maximal. Taken individually, diking and flow cycle alteration reduced spring freshet SWHA by 52% and 29%, respectively. SWHA has been both displaced to lower elevations and modified in its character because tidal range has increased. Our models of these processes are economical for the very long simulations (seasons to centuries) needed to understand historic changes and climate impacts on SWH. Through analysis of the nonlinear processes controlling surface elevation in a tidal river, we have identified some of the mechanisms that link freshwater discharge to SWH and salmonid survival. Title: Impacts of Columbia River Discharge on Salmonid Habitat: 2. Changes in Shallow-Water Habitat Author: Jay, David A., Kukulka, Tobias Year: 2003 This is the second part of an investigation that analyzes human alteration of shallow-water habitat (SWH) available to juvenile salmonids in the tidal Lower Columbia River. Part 2 develops a one-dimensional, subtidal river stage model that explains ~90% of the stage variance in the tidal river. This model and the tidal model developed in part 1 (Kukulka and Jay, 2003) uncouple the nonlinear interaction of river tides and river stage by referring both to external forcing by river discharge, ocean tides, and atmospheric pressure. Applying the two models, daily high-water levels were predicted for a reach from rkm-50 to rkm-90 during 1974 to 1998, the period of contemporary management. Predicted water levels were related to the bathymetry and topography to determine the changes in shallow-water habitat area (SWHA) caused by flood control dikes and altered flow management. Model results suggest that diking and a >40% reduction of peak flows have reduced SWHA by ~62% during the crucial spring freshet period during which juvenile salmon use of SWHA is maximal. Taken individually, diking and flow cycle alteration reduced spring freshet SWHA by 52% and 29%, respectively. SWHA has been both displaced to lower elevations and modified in its character because tidal range has increased. Our models of these processes are economical for the very long simulations (seasons to centuries) needed to understand historic changes and climate impacts on SWH. Through analysis of the nonlinear processes controlling surface elevation in a tidal river, we have identified some of the mechanisms that link freshwater discharge to SWH and salmonid survival. Close

• 28. [Article] The Impacts of Natural Flood Management Approaches on In-Channel Sediment Quality

  Natural Flood Management (NFM) techniques aim to reduce downstream flooding by storing and slowing the flow of stormwater to river channels. These techniques include a range of measures, including setback ...

  Citation × Citation Citation Abstract Copy Title: The Impacts of Natural Flood Management Approaches on In-Channel Sediment Quality Author: Janes, Victoria, Grabowski, Robert, Mant, J., Allen, Deonie Year: 2017 Natural Flood Management (NFM) techniques aim to reduce downstream flooding by storing and slowing the flow of stormwater to river channels. These techniques include a range of measures, including setback stormwater outfalls and the physical restoration of channels and floodplains, to improve the natural functioning of catchments. An additional benefit of NFM measures is the potential reduction in sediment and pollutant delivery to the channel. Urban development releases a variety of heavy metal and nutrient pollutants that enter rivers through stormwater outfalls with adverse effects on the aquatic ecosystem. In this study, the influence of channel modification and quality of the river habitat on the sediment quality surrounding stormwater outfalls was assessed. Sediment samples were taken at several outfalls within the Johnson Creek catchment, Oregon, USA, and analysed for a variety of urban pollutants. The level of river habitat quality and modification at each site were assessed using a semi-quantitative scoring methodology. Significant increases in pollutant levels were observed at outfalls, with a greater and more variable increase at direct compared to setback outfalls. Removal efficiency of certain pollutants was found to be significantly correlated to the level of habitat quality or modification (for Fe, Ba, Sn, Mg, P, K) indicating that more natural reaches had greater potential for pollutant removal. The findings highlight the multiple benefits associated with NFM and river restoration approaches in relation to sediment quality and pollutant content. Title: The Impacts of Natural Flood Management Approaches on In-Channel Sediment Quality Author: Janes, Victoria, Grabowski, Robert, Mant, J., Allen, Deonie Year: 2017 Natural Flood Management (NFM) techniques aim to reduce downstream flooding by storing and slowing the flow of stormwater to river channels. These techniques include a range of measures, including setback stormwater outfalls and the physical restoration of channels and floodplains, to improve the natural functioning of catchments. An additional benefit of NFM measures is the potential reduction in sediment and pollutant delivery to the channel. Urban development releases a variety of heavy metal and nutrient pollutants that enter rivers through stormwater outfalls with adverse effects on the aquatic ecosystem. In this study, the influence of channel modification and quality of the river habitat on the sediment quality surrounding stormwater outfalls was assessed. Sediment samples were taken at several outfalls within the Johnson Creek catchment, Oregon, USA, and analysed for a variety of urban pollutants. The level of river habitat quality and modification at each site were assessed using a semi-quantitative scoring methodology. Significant increases in pollutant levels were observed at outfalls, with a greater and more variable increase at direct compared to setback outfalls. Removal efficiency of certain pollutants was found to be significantly correlated to the level of habitat quality or modification (for Fe, Ba, Sn, Mg, P, K) indicating that more natural reaches had greater potential for pollutant removal. The findings highlight the multiple benefits associated with NFM and river restoration approaches in relation to sediment quality and pollutant content. Close

• 29. [Article] Estuarine Habitat Mitigation in Oregon: Policy Review, Analysis, and Recommended Improvements

  The report is organized in the following manner. After the introductory chapter (Chapter 1), Chapter Two describes Oregon’s current estuarine policy and related state and federal policies. Chapter Three ...

  Citation × Citation Citation Abstract Copy Title: Estuarine Habitat Mitigation in Oregon: Policy Review, Analysis, and Recommended Improvements Author: Buckley, Anna Year: 2006 The report is organized in the following manner. After the introductory chapter (Chapter 1), Chapter Two describes Oregon’s current estuarine policy and related state and federal policies. Chapter Three provides an inventory of recent permitted impacts and associated estuarine resource replacement. Chapter Four consists of a brief summary of the status of estuarine ecology and restoration/mitigation, with knowledge gaps identified. Chapter Five discusses wetland functional assessment tools and options for compensatory mitigation. This chapter begins with a description of the tidal Hydrogeomorphic (HGM) assessment method, how it compares to the estuarine resource replacement rules’ relative values table, and the utility of the tidal HGM in estuarine mitigation. Chapter Five, then, explores alternative mitigation options such as out-of-kind, banking, payment-in-lieu, and conservation in lieu. Chapter Six introduces the concept of incorporating compensatory mitigation into a watershed approach. Based upon the information gathered from the ecological and restoration/mitigation literature and the permit inventory, Chapter Seven outlines recommendations to change the statute, the rules, the standard operating procedures, and other aspects of Oregon’s estuarine resource replacement program. Title: Estuarine Habitat Mitigation in Oregon: Policy Review, Analysis, and Recommended Improvements Author: Buckley, Anna Year: 2006 The report is organized in the following manner. After the introductory chapter (Chapter 1), Chapter Two describes Oregon’s current estuarine policy and related state and federal policies. Chapter Three provides an inventory of recent permitted impacts and associated estuarine resource replacement. Chapter Four consists of a brief summary of the status of estuarine ecology and restoration/mitigation, with knowledge gaps identified. Chapter Five discusses wetland functional assessment tools and options for compensatory mitigation. This chapter begins with a description of the tidal Hydrogeomorphic (HGM) assessment method, how it compares to the estuarine resource replacement rules’ relative values table, and the utility of the tidal HGM in estuarine mitigation. Chapter Five, then, explores alternative mitigation options such as out-of-kind, banking, payment-in-lieu, and conservation in lieu. Chapter Six introduces the concept of incorporating compensatory mitigation into a watershed approach. Based upon the information gathered from the ecological and restoration/mitigation literature and the permit inventory, Chapter Seven outlines recommendations to change the statute, the rules, the standard operating procedures, and other aspects of Oregon’s estuarine resource replacement program. Close

• 30. [Article] Impacts of Columbia River Discharge on Salmonid Habitat: 1. A Nonstationary Fluvial Tide Model

  This is the first part of a two-part investigation that applies nonstationary time series analysis methods and the St. Venant equations to the problem of understanding juvenile salmonid access to favorable ...

  Citation × Citation Citation Abstract Copy Title: Impacts of Columbia River Discharge on Salmonid Habitat: 1. A Nonstationary Fluvial Tide Model Author: Jay, David A., Kukulka, Tobias Year: 2003 This is the first part of a two-part investigation that applies nonstationary time series analysis methods and the St. Venant equations to the problem of understanding juvenile salmonid access to favorable shallow-water habitat in a tidal river. Habitat access is a function of river stage, tidal range, and the distribution of bed elevation. Part 1 models nonstationary tidal properties: species amplitudes and phases and tidal range. Part 2 models low-frequency river stage in the Lower Columbia River and reconstructs historical water levels, using the tidal model from part 1. To incorporate the nonstationary frictional effects of variable river discharge into the tidal model, we decompose the tidal wave into tidal species and calculate daily tidal range. Our one-dimensional tidal model is based on analytic wave solutions to the linearized St. Venant equation and uses six coefficients per tidal species to represent the upstream evolution of the frictionally damped tidal wave. The form of the coefficients is derived from the St. Venant equations, but their values are determined objectively from the data. About 50 station-years of surface elevation data collected (1981-2000) below Bonneville Dam (235 km from the ocean) were processed with a wavelet filter bank to retrieve time series of tidal species properties. A min-max filter was used to estimate daily tidal range. Tidal range, diurnal, and semidiurnal amplitudes were predicted with mean root mean square errorsmm, which is significantly more accurate than predictions obtained from harmonic analysis. Thus despite the compact form of our solution, we model nonstationary fluvial tidal properties with a high level of accuracy. Title: Impacts of Columbia River Discharge on Salmonid Habitat: 1. A Nonstationary Fluvial Tide Model Author: Jay, David A., Kukulka, Tobias Year: 2003 This is the first part of a two-part investigation that applies nonstationary time series analysis methods and the St. Venant equations to the problem of understanding juvenile salmonid access to favorable shallow-water habitat in a tidal river. Habitat access is a function of river stage, tidal range, and the distribution of bed elevation. Part 1 models nonstationary tidal properties: species amplitudes and phases and tidal range. Part 2 models low-frequency river stage in the Lower Columbia River and reconstructs historical water levels, using the tidal model from part 1. To incorporate the nonstationary frictional effects of variable river discharge into the tidal model, we decompose the tidal wave into tidal species and calculate daily tidal range. Our one-dimensional tidal model is based on analytic wave solutions to the linearized St. Venant equation and uses six coefficients per tidal species to represent the upstream evolution of the frictionally damped tidal wave. The form of the coefficients is derived from the St. Venant equations, but their values are determined objectively from the data. About 50 station-years of surface elevation data collected (1981-2000) below Bonneville Dam (235 km from the ocean) were processed with a wavelet filter bank to retrieve time series of tidal species properties. A min-max filter was used to estimate daily tidal range. Tidal range, diurnal, and semidiurnal amplitudes were predicted with mean root mean square errorsmm, which is significantly more accurate than predictions obtained from harmonic analysis. Thus despite the compact form of our solution, we model nonstationary fluvial tidal properties with a high level of accuracy. Close