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• 1. [Article] LCMP - Residence Time and Seasonal Movements of Juvenile Coho Salmon in the Ecotone and Lower Estuary of Winchester Creek, South Slough, Oregon

  Abstract -- The juvenile life history of coho salmon Oncorhynchus kisutch in the stream-estuary ecotone of Winchester Creek, South Slough, Oregon, was investigated in 1999–2001. Seines and a rotary screw ...

  Citation × Citation Citation Abstract Copy Title: LCMP - Residence Time and Seasonal Movements of Juvenile Coho Salmon in the Ecotone and Lower Estuary of Winchester Creek, South Slough, Oregon Abstract -- The juvenile life history of coho salmon Oncorhynchus kisutch in the stream-estuary ecotone of Winchester Creek, South Slough, Oregon, was investigated in 1999–2001. Seines and a rotary screw trap were used to capture fish for dye-marking, and residence time within the ecotone was determined for recaptured marked fish. In the lower estuary, ultrasonic transmitters were used to document residence time and patterns of movement for smolts migrating to the ocean. Nearly half of each brood year moved to the estuary as subyearlings. A portion of age-0 juveniles that moved downstream during spring lived in the ecotone through summer for up to 8 months, then most moved back upstream to overwinter. Fish that moved to the ecotone during fall and winter had mean minimum residence times of 48 d in 1999 and 64 d in 2000. Some of the fish that moved to the ecotone during fall and winter moved into an off-channel beaver pond and resided there for a mean of 49 d. Spring age-1 smolts had a mean minimum residence time in the ecotone of 18 d for both years and used recently restored salt marshes and other off-channel habitats. Smolts implanted with ultrasonic transmitters lived in the lower estuary for an average of 5.8 d, during which their direction of movement corresponded to the direction of tidal flow. Title: LCMP - Residence Time and Seasonal Movements of Juvenile Coho Salmon in the Ecotone and Lower Estuary of Winchester Creek, South Slough, Oregon Abstract -- The juvenile life history of coho salmon Oncorhynchus kisutch in the stream-estuary ecotone of Winchester Creek, South Slough, Oregon, was investigated in 1999–2001. Seines and a rotary screw trap were used to capture fish for dye-marking, and residence time within the ecotone was determined for recaptured marked fish. In the lower estuary, ultrasonic transmitters were used to document residence time and patterns of movement for smolts migrating to the ocean. Nearly half of each brood year moved to the estuary as subyearlings. A portion of age-0 juveniles that moved downstream during spring lived in the ecotone through summer for up to 8 months, then most moved back upstream to overwinter. Fish that moved to the ecotone during fall and winter had mean minimum residence times of 48 d in 1999 and 64 d in 2000. Some of the fish that moved to the ecotone during fall and winter moved into an off-channel beaver pond and resided there for a mean of 49 d. Spring age-1 smolts had a mean minimum residence time in the ecotone of 18 d for both years and used recently restored salt marshes and other off-channel habitats. Smolts implanted with ultrasonic transmitters lived in the lower estuary for an average of 5.8 d, during which their direction of movement corresponded to the direction of tidal flow. Close

• 2. [Article] CRTCP - Monitoring of Downstream Fish Passage at Cougar Dam in the South Fork McKenzie River, Oregon 1998-00

  Abstract -- In 1993, Oregon Department of Fish and Wildlife (ODFW) began placing adult chinook salmon that were excess to hatchery operations at McKenzie and Willamette Hatchery above Cougar Dam in an ...

  Citation × Citation Citation Abstract Copy Title: CRTCP - Monitoring of Downstream Fish Passage at Cougar Dam in the South Fork McKenzie River, Oregon 1998-00 Abstract -- In 1993, Oregon Department of Fish and Wildlife (ODFW) began placing adult chinook salmon that were excess to hatchery operations at McKenzie and Willamette Hatchery above Cougar Dam in an attempt to restore some of the biological contributions salmon made to the ecology of the South Fork McKenzie River prior to Cougar Dam construction (Table 1). Contributions included increased nutrient input to the ecosystem and an additional food source for predators, including bull trout. In addition, the progeny of these adult salmon provided a landlocked chinook fishery in the reservoir and ODFW was able to discontinue annual releases of juvenile salmon reared in ODFW hatcheries (1996). ODFW assumed most of the salmon attempting to leave the reservoir would be killed by various means upon passage through the turbines or regulating outlet. Between 1994-97, ODFW field observations provided circumstantial evidence that some juvenile chinook were surviving passage through the dam. In 1998, we began monitoring juvenile chinook migration out of the reservoir to determine the number, size, age, and mortality rate of fish passing through the turbines and regulating outlet of Cougar Dam. Title: CRTCP - Monitoring of Downstream Fish Passage at Cougar Dam in the South Fork McKenzie River, Oregon 1998-00 Abstract -- In 1993, Oregon Department of Fish and Wildlife (ODFW) began placing adult chinook salmon that were excess to hatchery operations at McKenzie and Willamette Hatchery above Cougar Dam in an attempt to restore some of the biological contributions salmon made to the ecology of the South Fork McKenzie River prior to Cougar Dam construction (Table 1). Contributions included increased nutrient input to the ecosystem and an additional food source for predators, including bull trout. In addition, the progeny of these adult salmon provided a landlocked chinook fishery in the reservoir and ODFW was able to discontinue annual releases of juvenile salmon reared in ODFW hatcheries (1996). ODFW assumed most of the salmon attempting to leave the reservoir would be killed by various means upon passage through the turbines or regulating outlet. Between 1994-97, ODFW field observations provided circumstantial evidence that some juvenile chinook were surviving passage through the dam. In 1998, we began monitoring juvenile chinook migration out of the reservoir to determine the number, size, age, and mortality rate of fish passing through the turbines and regulating outlet of Cougar Dam. Close

• 3. [Article] AI - Rearing of Juvenile Salmon in Recovering Wetlands of the Salmon River Estuary

  Abstract -- The Salmon River estuary, on the central Oregon coast, provides an excellent opportunity to study salmonid use of restored tidal marsh. The U.S. Forest Service manages the estuary as part of ...

  Citation × Citation Citation Abstract Copy Title: AI - Rearing of Juvenile Salmon in Recovering Wetlands of the Salmon River Estuary Abstract -- The Salmon River estuary, on the central Oregon coast, provides an excellent opportunity to study salmonid use of restored tidal marsh. The U.S. Forest Service manages the estuary as part of the Cascade Head Scenic Research Area with the goal to rehabilitate the estuary “to its condition prior to the existing diking and agricultural use.” To achieve this goal, the U.S. Forest Service has completed three dike removal projects at 9-year intervals beginning in 1978. These projects created a patchwork of restored marshes in various stages of recovery, providing a natural laboratory for studying marsh restoration processes and their effects on estuarine rearing salmonids. Our Sea Grant-funded research, which is a cooperative study with researchers from the University of Washington, has four objectives: (1) describe salmon species use of undiked reference and recovering marshes; (2) compare diets of juvenile salmon among reference and diked marshes of different recovery ages; (3) compare availability and distribution of prey organisms consumed by juvenile salmon; and (4) assess geomorphological and ecological indicators (“metrics”) of restored wetlands and relationships to salmon use. This report describes the results of fish distribution and abundance surveys. Results of the other objectives are described in Gray et al. (In Review). Title: AI - Rearing of Juvenile Salmon in Recovering Wetlands of the Salmon River Estuary Abstract -- The Salmon River estuary, on the central Oregon coast, provides an excellent opportunity to study salmonid use of restored tidal marsh. The U.S. Forest Service manages the estuary as part of the Cascade Head Scenic Research Area with the goal to rehabilitate the estuary “to its condition prior to the existing diking and agricultural use.” To achieve this goal, the U.S. Forest Service has completed three dike removal projects at 9-year intervals beginning in 1978. These projects created a patchwork of restored marshes in various stages of recovery, providing a natural laboratory for studying marsh restoration processes and their effects on estuarine rearing salmonids. Our Sea Grant-funded research, which is a cooperative study with researchers from the University of Washington, has four objectives: (1) describe salmon species use of undiked reference and recovering marshes; (2) compare diets of juvenile salmon among reference and diked marshes of different recovery ages; (3) compare availability and distribution of prey organisms consumed by juvenile salmon; and (4) assess geomorphological and ecological indicators (“metrics”) of restored wetlands and relationships to salmon use. This report describes the results of fish distribution and abundance surveys. Results of the other objectives are described in Gray et al. (In Review). Close

• 4. [Article] The Distribution and Abundance of Great Basin Redband Trout: An Application of Variable Probability Sampling in a 1999 Status Review

  Abstract -- Using a variable probability sampling design, streams throughout the entire range of Great Basin redband trout (Oncorhynchus mykiss ssp.) were randomly sampled use the EMAP sampling protocol, ...

  Citation × Citation Citation Abstract Copy Title: The Distribution and Abundance of Great Basin Redband Trout: An Application of Variable Probability Sampling in a 1999 Status Review Abstract -- Using a variable probability sampling design, streams throughout the entire range of Great Basin redband trout (Oncorhynchus mykiss ssp.) were randomly sampled use the EMAP sampling protocol, such that 35 sample sites were apportioned to each of six subbasins (Silver Lake, Lake Abert, Goose Lake, Warner Valley, Catlow Valley, and Malheur Lakes). A total of 185 sites (out of a target of 210) were visited by three-person crews that conducted habitat surveys and population estimates in sample reaches whose length were nearly 20 times their channel width. A minimal sampling intensity was based on previously encountered levels of between site variance in abundance estimates for the species. The population estimate for age 1+ redband trout was 948,852 fish (+/– 21%), with confidence limits ranging from 26% to 43% of individual subbasin estimates. Age 1+ fish abundance in terms of density (fish m-2) showed no significant differences between any subbasin, while there were significant differences in biomass (g m-2), where one subbasin had significantly higher (Catlow Valley) biomasses, and one significantly lower (Goose Lake). These comparisons were supported by like differences in mean weight (g fish-2). Analysis of stream habitat characteristics and fish abundance revealed no relationship, or model, that was generally consistent throughout the Great Basin, though interpretable patterns were evident within some stream systems where sampling intensity happened to be sufficiently high. Thus while a landscape level sampling design was well suited to address a regional estimate of abundance, useful interpretation of fish and habitat relationships appeared to be embedded within the stream level of organization, and could not be addressed by the variable probability sampling design set for a minimal sampling intensity. Title: The Distribution and Abundance of Great Basin Redband Trout: An Application of Variable Probability Sampling in a 1999 Status Review Abstract -- Using a variable probability sampling design, streams throughout the entire range of Great Basin redband trout (Oncorhynchus mykiss ssp.) were randomly sampled use the EMAP sampling protocol, such that 35 sample sites were apportioned to each of six subbasins (Silver Lake, Lake Abert, Goose Lake, Warner Valley, Catlow Valley, and Malheur Lakes). A total of 185 sites (out of a target of 210) were visited by three-person crews that conducted habitat surveys and population estimates in sample reaches whose length were nearly 20 times their channel width. A minimal sampling intensity was based on previously encountered levels of between site variance in abundance estimates for the species. The population estimate for age 1+ redband trout was 948,852 fish (+/– 21%), with confidence limits ranging from 26% to 43% of individual subbasin estimates. Age 1+ fish abundance in terms of density (fish m-2) showed no significant differences between any subbasin, while there were significant differences in biomass (g m-2), where one subbasin had significantly higher (Catlow Valley) biomasses, and one significantly lower (Goose Lake). These comparisons were supported by like differences in mean weight (g fish-2). Analysis of stream habitat characteristics and fish abundance revealed no relationship, or model, that was generally consistent throughout the Great Basin, though interpretable patterns were evident within some stream systems where sampling intensity happened to be sufficiently high. Thus while a landscape level sampling design was well suited to address a regional estimate of abundance, useful interpretation of fish and habitat relationships appeared to be embedded within the stream level of organization, and could not be addressed by the variable probability sampling design set for a minimal sampling intensity. Close

• 5. [Article] Standard operating procedures for collection and preparation of fish scales and data management

  Abstract -- The project maintains high standards of quality in estimation of life history parameters, based on reads of fish scales, including accuracy, precision and efficiency from sample and data handling ...

  Citation × Citation Citation Abstract Copy Title: Standard operating procedures for collection and preparation of fish scales and data management Abstract -- The project maintains high standards of quality in estimation of life history parameters, based on reads of fish scales, including accuracy, precision and efficiency from sample and data handling through age estimations and other life history analyses and data dissemination. Title: Standard operating procedures for collection and preparation of fish scales and data management Abstract -- The project maintains high standards of quality in estimation of life history parameters, based on reads of fish scales, including accuracy, precision and efficiency from sample and data handling through age estimations and other life history analyses and data dissemination. Close

• 6. [Article] Nilestun Year 2 Efficacy Monitoring Report - Juvenile Fish Response

  Abstract -- Catch per unit effort data were gathered for three salt marsh restoration sub-basins, three mainstem river reference locations, and a salt marsh reference sub-basin. Report results cover May-Aug ...

  Citation × Citation Citation Abstract Copy Title: Nilestun Year 2 Efficacy Monitoring Report - Juvenile Fish Response Abstract -- Catch per unit effort data were gathered for three salt marsh restoration sub-basins, three mainstem river reference locations, and a salt marsh reference sub-basin. Report results cover May-Aug occupancy and catch per unit effort during the second year after restoration. Results suggest significant response by age-0 and age-1 salmonids. More broad results provided in the report cover tidal inundation, exchange rates, salinity, temperature, soil moisture and plant communities. Title: Nilestun Year 2 Efficacy Monitoring Report - Juvenile Fish Response Abstract -- Catch per unit effort data were gathered for three salt marsh restoration sub-basins, three mainstem river reference locations, and a salt marsh reference sub-basin. Report results cover May-Aug occupancy and catch per unit effort during the second year after restoration. Results suggest significant response by age-0 and age-1 salmonids. More broad results provided in the report cover tidal inundation, exchange rates, salinity, temperature, soil moisture and plant communities. Close

• 7. [Article] LCMP - Juvenile Salmonid Outmigration in the Little North Fork Wilson and Little South Fork Kilchis Rivers - 2001

  Abstract -- Since 1998, as part of the Oregon Plan for Salmon and Watersheds, the Oregon Department of Fish and Wildlife (ODFW) has monitored downstream migration of juvenile salmonids (Oncorhynchus spp.) ...

  Citation × Citation Citation Abstract Copy Title: LCMP - Juvenile Salmonid Outmigration in the Little North Fork Wilson and Little South Fork Kilchis Rivers - 2001 Abstract -- Since 1998, as part of the Oregon Plan for Salmon and Watersheds, the Oregon Department of Fish and Wildlife (ODFW) has monitored downstream migration of juvenile salmonids (Oncorhynchus spp.) in various streams along the coast. The goals of this program were discussed by Dalton (1998). Briefly, we examine migration timing and abundance of the various species by size and/or age class. In the Tillamook Bay watershed, the Tillamook County Performance Partnership (TCCP) and the Oregon Department of Forestry (ODFW) have provided funding for monitoring in the Little North Fork (LNF) Wilson and Little South Fork (LSF) Kilchis rivers. Data collected during the 2001 trapping season and an annual report are presented for juvenile salmonid out-migrant trapping on the LNF Wilson and LSF Kilchis rivers. Juvenile chinook salmon numbers had decreased greatly each year from 1998 to 2000 in both rivers, but in 2001 this trend was reversed. Data is presented as tables and figures within the report. Title: LCMP - Juvenile Salmonid Outmigration in the Little North Fork Wilson and Little South Fork Kilchis Rivers - 2001 Abstract -- Since 1998, as part of the Oregon Plan for Salmon and Watersheds, the Oregon Department of Fish and Wildlife (ODFW) has monitored downstream migration of juvenile salmonids (Oncorhynchus spp.) in various streams along the coast. The goals of this program were discussed by Dalton (1998). Briefly, we examine migration timing and abundance of the various species by size and/or age class. In the Tillamook Bay watershed, the Tillamook County Performance Partnership (TCCP) and the Oregon Department of Forestry (ODFW) have provided funding for monitoring in the Little North Fork (LNF) Wilson and Little South Fork (LSF) Kilchis rivers. Data collected during the 2001 trapping season and an annual report are presented for juvenile salmonid out-migrant trapping on the LNF Wilson and LSF Kilchis rivers. Juvenile chinook salmon numbers had decreased greatly each year from 1998 to 2000 in both rivers, but in 2001 this trend was reversed. Data is presented as tables and figures within the report. Close

• 8. [Article] Development of a system-wide Predator Control Program: Indexing and Fisheries Evaluation - Columbia and Snake Rivers

  Abstract -- The Northern Pikeminnow Management Program (NPMP), a fishery aimed at reducing predation on juvenile salmonids by northern pikeminnow (Ptychocheilus oregonensis), was implemented for the 16th ...

  Citation × Citation Citation Abstract Copy Title: Development of a system-wide Predator Control Program: Indexing and Fisheries Evaluation - Columbia and Snake Rivers Abstract -- The Northern Pikeminnow Management Program (NPMP), a fishery aimed at reducing predation on juvenile salmonids by northern pikeminnow (Ptychocheilus oregonensis), was implemented for the 16th consecutive year in the mainstem Columbia and Snake rivers. We report on (1) northern pikeminnow exploitation rates, predation estimates, spaghetti tag loss rates, and age validation work; (2) population parameters of northern pikeminnow, smallmouth bass (Micropterus dolomieu), and walleye (Sander vitreus) in The Dalles and John Day reservoirs, and (3) possible compensatory responses by these species. Title: Development of a system-wide Predator Control Program: Indexing and Fisheries Evaluation - Columbia and Snake Rivers Abstract -- The Northern Pikeminnow Management Program (NPMP), a fishery aimed at reducing predation on juvenile salmonids by northern pikeminnow (Ptychocheilus oregonensis), was implemented for the 16th consecutive year in the mainstem Columbia and Snake rivers. We report on (1) northern pikeminnow exploitation rates, predation estimates, spaghetti tag loss rates, and age validation work; (2) population parameters of northern pikeminnow, smallmouth bass (Micropterus dolomieu), and walleye (Sander vitreus) in The Dalles and John Day reservoirs, and (3) possible compensatory responses by these species. Close

• 9. [Article] Grande Ronde River Subbasin Salmonid Juvenile Life History Study - Migratory Year 2016

  Abstract -- Field data from the Grande Ronde River Subbasin (northeast Oregon) for a study designed to document and describe status and life history strategies of spring Chinook salmon and summer steelhead. ...

  Citation × Citation Citation Abstract Copy Title: Grande Ronde River Subbasin Salmonid Juvenile Life History Study - Migratory Year 2016 Abstract -- Field data from the Grande Ronde River Subbasin (northeast Oregon) for a study designed to document and describe status and life history strategies of spring Chinook salmon and summer steelhead. Data include rotary screw trap catch and associated trap efficiency estimates, length and weight data for spring Chinook salmon and summer steelhead, age data for summer steelhead, and water temperature and discharge data for select streams in the Grande Ronde River Subbasin. Title: Grande Ronde River Subbasin Salmonid Juvenile Life History Study - Migratory Year 2016 Abstract -- Field data from the Grande Ronde River Subbasin (northeast Oregon) for a study designed to document and describe status and life history strategies of spring Chinook salmon and summer steelhead. Data include rotary screw trap catch and associated trap efficiency estimates, length and weight data for spring Chinook salmon and summer steelhead, age data for summer steelhead, and water temperature and discharge data for select streams in the Grande Ronde River Subbasin. Close

• 10. [Article] Little Sheep Creek, Imnaha River Subbasin, Rotary Screw Trap Data - Migratory Year 2016

  Abstract -- Field data from Little Sheep Creek, Imnaha River Subbasin (northeast Oregon)for a project designed to collect tissue samples from and enumerate summer steelhead outmigrants for an ongoing study ...

  Citation × Citation Citation Abstract Copy Title: Little Sheep Creek, Imnaha River Subbasin, Rotary Screw Trap Data - Migratory Year 2016 Abstract -- Field data from Little Sheep Creek, Imnaha River Subbasin (northeast Oregon)for a project designed to collect tissue samples from and enumerate summer steelhead outmigrants for an ongoing study of the relative reproductive success (RRS) of natural and hatchery origin summer steelhead adults released to spawn in the wild. Title: Little Sheep Creek, Imnaha River Subbasin, Rotary Screw Trap Data - Migratory Year 2016 Abstract -- Field data from Little Sheep Creek, Imnaha River Subbasin (northeast Oregon)for a project designed to collect tissue samples from and enumerate summer steelhead outmigrants for an ongoing study of the relative reproductive success (RRS) of natural and hatchery origin summer steelhead adults released to spawn in the wild. Close