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• 1. [Article] Status of Winter Rearing Habitat in Four Coho Population Units_ODFW AQI Winter Report Final 2008

  Abstract -- We described the status of habitat in four Oregon coastal coho salmon (Oncorhynchus kisutch) population units (Nehalem, Siuslaw, Coquille, South Umpqua) during winter 2007, estimated the potential ...

  Citation × Citation Citation Abstract Copy Title: Status of Winter Rearing Habitat in Four Coho Population Units_ODFW AQI Winter Report Final 2008 Abstract -- We described the status of habitat in four Oregon coastal coho salmon (Oncorhynchus kisutch) population units (Nehalem, Siuslaw, Coquille, South Umpqua) during winter 2007, estimated the potential winter rearing capacity of streams within those population units, and described the differences observed in stream habitat between winter and summer with emphasis on slow water and secondary channel habitats. Sample sites were randomly selected and spatially balanced within the distribution of coho salmon (juvenile and adult) in Oregon coastal watersheds south of the Columbia River. Twenty five sites were targeted within each of the four population units. Each survey was approximately 1000 m in length and adhered to protocols in Moore et al (2007). The Habitat Limiting Factors Model (HLFM) was used to estimate habitat capacity and quality for rearing juvenile coho. The HLFM predicted that the Nehalem and Siuslaw basins could support the highest density of juvenile coho, and the South Umpqua the least. Seasonal changes in habitat were similar to that reported in a previous study. Winter surveys facilitated the assessment of habitat status and estimating capacity because the surveys were conducted at the time when habitat is most limiting to survival of juvenile coho. Winter surveys were particularly valuable in capturing secondary channel and slow water habitat units such as beaver ponds and alcoves. We also performed a sensitivity analysis to determine the number of survey sites necessary to represent each population unit within the desired confidence range of 30% recommended in the Coho Conservation Plan. Twenty five target sites were not adequate to describe the winter parr capacity within a 95% confidence interval of +30% in each population unit. Confidence intervals of estimates of parr per km ranged from 34 to 60% and mean parr per m2 ranged from 20 to 45%. Title: Status of Winter Rearing Habitat in Four Coho Population Units_ODFW AQI Winter Report Final 2008 Abstract -- We described the status of habitat in four Oregon coastal coho salmon (Oncorhynchus kisutch) population units (Nehalem, Siuslaw, Coquille, South Umpqua) during winter 2007, estimated the potential winter rearing capacity of streams within those population units, and described the differences observed in stream habitat between winter and summer with emphasis on slow water and secondary channel habitats. Sample sites were randomly selected and spatially balanced within the distribution of coho salmon (juvenile and adult) in Oregon coastal watersheds south of the Columbia River. Twenty five sites were targeted within each of the four population units. Each survey was approximately 1000 m in length and adhered to protocols in Moore et al (2007). The Habitat Limiting Factors Model (HLFM) was used to estimate habitat capacity and quality for rearing juvenile coho. The HLFM predicted that the Nehalem and Siuslaw basins could support the highest density of juvenile coho, and the South Umpqua the least. Seasonal changes in habitat were similar to that reported in a previous study. Winter surveys facilitated the assessment of habitat status and estimating capacity because the surveys were conducted at the time when habitat is most limiting to survival of juvenile coho. Winter surveys were particularly valuable in capturing secondary channel and slow water habitat units such as beaver ponds and alcoves. We also performed a sensitivity analysis to determine the number of survey sites necessary to represent each population unit within the desired confidence range of 30% recommended in the Coho Conservation Plan. Twenty five target sites were not adequate to describe the winter parr capacity within a 95% confidence interval of +30% in each population unit. Confidence intervals of estimates of parr per km ranged from 34 to 60% and mean parr per m2 ranged from 20 to 45%. Close

• 2. [Article] AI - Oregon Coast Coho Assessment: Habitat

  Abstract -- In November 2003, the State of Oregon began a comprehensive review of coho and their habitat in NOAA Fisheries’ Oregon Coastal coho Evolutionary Significant Unit (ESU). The purpose of the review ...

  Citation × Citation Citation Abstract Copy Title: AI - Oregon Coast Coho Assessment: Habitat Abstract -- In November 2003, the State of Oregon began a comprehensive review of coho and their habitat in NOAA Fisheries’ Oregon Coastal coho Evolutionary Significant Unit (ESU). The purpose of the review is threefold: 1) provide an analysis of the current status and trend in coho populations, their habitat, and related threats; 2) provide NOAA Fisheries with information it requires to determine whether formalized conservation efforts within the ESU justify not listing coho under the Endangered Species Act as outlined in their Policy for Evaluation of Conservation Efforts; and 3) provide information to state agencies, watershed councils, and others participating in the Oregon Plan for and Watersheds (OPSW) so they may assess the success of their OPSW programs and modify them where necessary to better achieve their objectives (i.e. adaptive management). This report describes the current status and trend of instream physical habitat for coho in the ESU as well as summarizes and evaluates instream habitat restoration activities conducted from 1997-2003. Persistence of coho salmon populations in coastal drainages during periods of poor ocean conditions is dependent on the distribution and carrying capacity of freshwater habitat. Coho salmon are sensitive to the quality of habitat during each life stage and seasonal effects on survival are propagated through subsequent life stages (Nickelson et al. 1992). In this chapter, we use measures of habitat quality and quantity to determine overall carrying capacity of freshwater habitat at two juvenile coho life stages: 1) fry through summer parr; and 2) over-winter parr to smolt. From this information we identify life stages at which habitat may limit the coho smolt production capacity for the coho salmon populations considered independent by NOAA Fisheries Technical Recovery Team. Title: AI - Oregon Coast Coho Assessment: Habitat Abstract -- In November 2003, the State of Oregon began a comprehensive review of coho and their habitat in NOAA Fisheries’ Oregon Coastal coho Evolutionary Significant Unit (ESU). The purpose of the review is threefold: 1) provide an analysis of the current status and trend in coho populations, their habitat, and related threats; 2) provide NOAA Fisheries with information it requires to determine whether formalized conservation efforts within the ESU justify not listing coho under the Endangered Species Act as outlined in their Policy for Evaluation of Conservation Efforts; and 3) provide information to state agencies, watershed councils, and others participating in the Oregon Plan for and Watersheds (OPSW) so they may assess the success of their OPSW programs and modify them where necessary to better achieve their objectives (i.e. adaptive management). This report describes the current status and trend of instream physical habitat for coho in the ESU as well as summarizes and evaluates instream habitat restoration activities conducted from 1997-2003. Persistence of coho salmon populations in coastal drainages during periods of poor ocean conditions is dependent on the distribution and carrying capacity of freshwater habitat. Coho salmon are sensitive to the quality of habitat during each life stage and seasonal effects on survival are propagated through subsequent life stages (Nickelson et al. 1992). In this chapter, we use measures of habitat quality and quantity to determine overall carrying capacity of freshwater habitat at two juvenile coho life stages: 1) fry through summer parr; and 2) over-winter parr to smolt. From this information we identify life stages at which habitat may limit the coho smolt production capacity for the coho salmon populations considered independent by NOAA Fisheries Technical Recovery Team. Close

• 3. [Article] Umpqua Fish Management District Guide to Restoration Site Selection

  Abstract -- Research in Oregon coastal areas indicates there is potential to improve the productive capacity of freshwater rearing streams, principally by improving the quality of over-winter rearing habitat ...

  Citation × Citation Citation Abstract Copy Title: Umpqua Fish Management District Guide to Restoration Site Selection Abstract -- Research in Oregon coastal areas indicates there is potential to improve the productive capacity of freshwater rearing streams, principally by improving the quality of over-winter rearing habitat for juvenile salmonids. The objective of this document is to identify stream reaches where habitat restoration work may improve the status of anadromous salmonids. This document also represents a contribution to the Oregon's Coastal Salmon Restoration Initiative. In this report, we identify stream reaches in the Umpqua basin with habitat restoration potential. We also discuss selection of appropriate restoration techniques. The list of potential restoration reaches was compiled based on analysis of Aquatic Habitat Inventory Data and recommendations of ODFW biologists. Our work is designed to complement ongoing habitat protection and restoration efforts by ODFW personnel. The selected reaches may be suitable for various instream and riparian-zone restoration activities specific to perceived limiting factors, thereby increasing capacity to produce salmonids. The reaches have relatively low gradient (<5%), moderate active channel width (3-12 m), and are within relatively broad valleys. These physical characteristics offer the highest potential capacity to support juvenile anadromous fish. The proposed work is intended to help restore natural stream and riparian processes to a condition that will support more production of anadromous fish than is currently possible. Data from almost 1,200 stream reaches were screened to identify the 215 potential restoration sites described in this report. The sites are primarily on private industrial timberlands. A full description of each potential restoration site was limited by our timetable. As work proceeds on these reaches in the future, prioritization of current sites and identification of additional restoration reaches will occur. In guides prepared for other basins, the sites or reaches were presented as "probably suitable" for restoration activities to begin immediately. In this guide, however, we could not reduce the list to those sites appropriate for immediate project design. Consequently, the reaches described should be evaluated further before making any commitments to project design. An approach to further evaluation of the proposed restoration sites is described in this report. Title: Umpqua Fish Management District Guide to Restoration Site Selection Abstract -- Research in Oregon coastal areas indicates there is potential to improve the productive capacity of freshwater rearing streams, principally by improving the quality of over-winter rearing habitat for juvenile salmonids. The objective of this document is to identify stream reaches where habitat restoration work may improve the status of anadromous salmonids. This document also represents a contribution to the Oregon's Coastal Salmon Restoration Initiative. In this report, we identify stream reaches in the Umpqua basin with habitat restoration potential. We also discuss selection of appropriate restoration techniques. The list of potential restoration reaches was compiled based on analysis of Aquatic Habitat Inventory Data and recommendations of ODFW biologists. Our work is designed to complement ongoing habitat protection and restoration efforts by ODFW personnel. The selected reaches may be suitable for various instream and riparian-zone restoration activities specific to perceived limiting factors, thereby increasing capacity to produce salmonids. The reaches have relatively low gradient (<5%), moderate active channel width (3-12 m), and are within relatively broad valleys. These physical characteristics offer the highest potential capacity to support juvenile anadromous fish. The proposed work is intended to help restore natural stream and riparian processes to a condition that will support more production of anadromous fish than is currently possible. Data from almost 1,200 stream reaches were screened to identify the 215 potential restoration sites described in this report. The sites are primarily on private industrial timberlands. A full description of each potential restoration site was limited by our timetable. As work proceeds on these reaches in the future, prioritization of current sites and identification of additional restoration reaches will occur. In guides prepared for other basins, the sites or reaches were presented as "probably suitable" for restoration activities to begin immediately. In this guide, however, we could not reduce the list to those sites appropriate for immediate project design. Consequently, the reaches described should be evaluated further before making any commitments to project design. An approach to further evaluation of the proposed restoration sites is described in this report. Close

• 4. [Article] Williams Hydrologic Assessment

  Abstract -- The Assessment is divided into two Phases. Phase 1 is a Hydrologic Assessment of the community of William to determine how human development in the Williams areas has altered the natural drainage ...

  Citation × Citation Citation Abstract Copy Title: Williams Hydrologic Assessment Abstract -- The Assessment is divided into two Phases. Phase 1 is a Hydrologic Assessment of the community of William to determine how human development in the Williams areas has altered the natural drainage pattern and contributed to frequent flooding in downtown Williams. Assessing sediment sources, loss of wet areas, water storage capacity, and the condition of streams identified potential restoration opportunities. Phase 2 will use information from Phase 1 to build a flood management and restoration plan. Title: Williams Hydrologic Assessment Abstract -- The Assessment is divided into two Phases. Phase 1 is a Hydrologic Assessment of the community of William to determine how human development in the Williams areas has altered the natural drainage pattern and contributed to frequent flooding in downtown Williams. Assessing sediment sources, loss of wet areas, water storage capacity, and the condition of streams identified potential restoration opportunities. Phase 2 will use information from Phase 1 to build a flood management and restoration plan. Close

• 5. [Article] Status of Winter Rearing Habitat In Four Coho Population Units, 2007 Report Number: OPSW-ODFW-2008-7

  Abstract -- In a recent assessment of coastal coho salmon by the Oregon Department of Fish and Wildlife (2005), the authors concluded that productivity in 21 of 21 coastal coho populations was limited ...

  Citation × Citation Citation Abstract Copy Title: Status of Winter Rearing Habitat In Four Coho Population Units, 2007 Report Number: OPSW-ODFW-2008-7 Abstract -- In a recent assessment of coastal coho salmon by the Oregon Department of Fish and Wildlife (2005), the authors concluded that productivity in 21 of 21 coastal coho populations was limited primarily (13) or secondarily (8) by the complexity of stream habitat used by juvenile coho during their first winter of freshwater residence. The Oregon Coast Coho Conservation Plan (Nicholas 2006), written in response to the assessment, concluded that recovery of coho populations will depend largely on improvement of freshwater habitat. The Conservation Plan (Nicholas 2006) presents population specific goals for the amount and quality of winter habitat needed to achieve desired status of coho populations. Monitoring objectives in the Plan are 1) describe the status of freshwater habitat in each population unit with a focus on features important to overwinter survival of juvenile coho, 2) estimate carrying capacity in each population unit with + 30% confidence, and 3) measure progress towards meeting the habitat goals of the Conservation Plan. This report describes the first two monitoring objectives for winter habitat in four population units: the Coquille, South Umpqua, Siuslaw, and Nehalem. Winter habitat surveys are conducted to describe the freshwater habitat conditions that may limit the survival of juvenile coho during the season at which the conditions are limiting. The Habitat Limiting Factors Model (Nickelson et al. 1992a, Nickelson et al. 1992b, Nickelson 1998) estimates the capacity of streams to support juvenile salmon based on quantitative descriptions of summer and winter habitat. The model assigns value to the size, type and complexity of habitat units, giving highest value to slow water pools such as alcoves and beaver ponds, and pools with large wood. Because winter habitat limits the capacity of most coastal streams to support juvenile coho (Rodgers et al. 2005), accurate estimates of winter habitat are essential to life cycle modeling and to meet objectives of the Conservation Plan. Rodgers et al. (2005) estimated potential carrying capacity of stream habitat within each coastal coho population unit, but statistical confidence was limited by the source and manipulation of the data. Although the data set was extensive, most of the reaches were not randomly selected, and a regression model was used to extrapolate conditions from summer to winter (Rodgers et al. 2005). Summer surveys provide applicable information, but at low flow conditions. Summer weather and stream flows are predictable and conducive to field work; study sites are more accessible, work days are longer and warmer, lower water levels enable walking in the channel more easily, and water clarity is high. However, while more difficult logistically, winter surveys provide estimates during high flow conditions thought to be most important to juvenile coho survival. The winter surveys are conducted during “base flow” when off-channel habitats and secondary channels are inundated, but not over floodplain. The winter 2007 survey sites were selected using the Generalized Random Tessellation Stratified (GRTS) sample design (Stevens 2002) from a pool of sites previously surveyed during summer. This provided an opportunity to describe status within coho population units and refine the summer to winter conversion regression model. More sites are visited during summer than winter, and the sample pool will expand if we can use summer surveys to predict winter conditions. A thorough description of seasonal habitat variation will determine the appropriateness of using summer habitat data to assess habitat conditions during the winter. The objectives of this report are to provide the status of winter habitat surveyed in 2007 in four Oregon coastal coho salmon (Oncorhynchus kisutch) population units (Nehalem, Siuslaw, Coquille, South Umpqua), estimate the potential winter capacity of streams within those population units, and describe the differences observed in stream habitat between winter and summer with emphasis on slow water and secondary channel habitats. We also performed a sensitivity analysis to determine the number of survey sites necessary to represent each population unit within the desired confidence recommended in the Conservation Plan (Nicholas 2006). Title: Status of Winter Rearing Habitat In Four Coho Population Units, 2007 Report Number: OPSW-ODFW-2008-7 Abstract -- In a recent assessment of coastal coho salmon by the Oregon Department of Fish and Wildlife (2005), the authors concluded that productivity in 21 of 21 coastal coho populations was limited primarily (13) or secondarily (8) by the complexity of stream habitat used by juvenile coho during their first winter of freshwater residence. The Oregon Coast Coho Conservation Plan (Nicholas 2006), written in response to the assessment, concluded that recovery of coho populations will depend largely on improvement of freshwater habitat. The Conservation Plan (Nicholas 2006) presents population specific goals for the amount and quality of winter habitat needed to achieve desired status of coho populations. Monitoring objectives in the Plan are 1) describe the status of freshwater habitat in each population unit with a focus on features important to overwinter survival of juvenile coho, 2) estimate carrying capacity in each population unit with + 30% confidence, and 3) measure progress towards meeting the habitat goals of the Conservation Plan. This report describes the first two monitoring objectives for winter habitat in four population units: the Coquille, South Umpqua, Siuslaw, and Nehalem. Winter habitat surveys are conducted to describe the freshwater habitat conditions that may limit the survival of juvenile coho during the season at which the conditions are limiting. The Habitat Limiting Factors Model (Nickelson et al. 1992a, Nickelson et al. 1992b, Nickelson 1998) estimates the capacity of streams to support juvenile salmon based on quantitative descriptions of summer and winter habitat. The model assigns value to the size, type and complexity of habitat units, giving highest value to slow water pools such as alcoves and beaver ponds, and pools with large wood. Because winter habitat limits the capacity of most coastal streams to support juvenile coho (Rodgers et al. 2005), accurate estimates of winter habitat are essential to life cycle modeling and to meet objectives of the Conservation Plan. Rodgers et al. (2005) estimated potential carrying capacity of stream habitat within each coastal coho population unit, but statistical confidence was limited by the source and manipulation of the data. Although the data set was extensive, most of the reaches were not randomly selected, and a regression model was used to extrapolate conditions from summer to winter (Rodgers et al. 2005). Summer surveys provide applicable information, but at low flow conditions. Summer weather and stream flows are predictable and conducive to field work; study sites are more accessible, work days are longer and warmer, lower water levels enable walking in the channel more easily, and water clarity is high. However, while more difficult logistically, winter surveys provide estimates during high flow conditions thought to be most important to juvenile coho survival. The winter surveys are conducted during “base flow” when off-channel habitats and secondary channels are inundated, but not over floodplain. The winter 2007 survey sites were selected using the Generalized Random Tessellation Stratified (GRTS) sample design (Stevens 2002) from a pool of sites previously surveyed during summer. This provided an opportunity to describe status within coho population units and refine the summer to winter conversion regression model. More sites are visited during summer than winter, and the sample pool will expand if we can use summer surveys to predict winter conditions. A thorough description of seasonal habitat variation will determine the appropriateness of using summer habitat data to assess habitat conditions during the winter. The objectives of this report are to provide the status of winter habitat surveyed in 2007 in four Oregon coastal coho salmon (Oncorhynchus kisutch) population units (Nehalem, Siuslaw, Coquille, South Umpqua), estimate the potential winter capacity of streams within those population units, and describe the differences observed in stream habitat between winter and summer with emphasis on slow water and secondary channel habitats. We also performed a sensitivity analysis to determine the number of survey sites necessary to represent each population unit within the desired confidence recommended in the Conservation Plan (Nicholas 2006). Close

• 6. [Article] The Status and Trend of Physical Habitat and Rearing Potential in Coho Bearing Streams in the Oregon Coastal Coho Evolutionary Significant Unit Report Number: OPSW-ODFW-2009-5

  Abstract -- In 1997, the Oregon Coastal Restoration Initiative (OCSRI 1997) identified the quality of stream habitat as a potential factor influencing the decline of coho salmon (Oncorhynchus kisutch) ...

  Citation × Citation Citation Abstract Copy Title: The Status and Trend of Physical Habitat and Rearing Potential in Coho Bearing Streams in the Oregon Coastal Coho Evolutionary Significant Unit Report Number: OPSW-ODFW-2009-5 Abstract -- In 1997, the Oregon Coastal Restoration Initiative (OCSRI 1997) identified the quality of stream habitat as a potential factor influencing the decline of coho salmon (Oncorhynchus kisutch) in Oregon coastal streams. In 1998, the Oregon Department of Fish and Wildlife (ODFW) implemented a monitoring program that utilized a random, spatially balanced survey design to provide statistically rigorous information on the status and trend of habitat conditions in Oregon coastal streams. In response to the ESA listing of coho salmon, the State of Oregon published a comprehensive review of aquatic habitat in the Oregon Coastal Coho Evolutionary Significant Unit (ESU) in 2005 (Rodgers et al 2005). The NOAA Fisheries more recently published a request for additional information in the 2009 Federal Register notice (Federal Register / Vol. 74, No. 81 / Wednesday, April 29, 2009). This report will serve as an update to Rodgers et al (2005), and will provide an analysis of the current status and trends in aquatic habitat from 1998 through 2008 within the Oregon Coastal Coho ESU. The status and trend of instream physical habitat conditions in the Oregon Coastal coho ESU were assessed from twelve variables collected by the ODFW habitat monitoring program from 1998-2008. Habitat conditions were described at the scale of the ESU, four monitoring areas/strata within the ESU, and by six land use categories (agriculture, urban, private non-industrial and industrial forest, and public state and federal forest). The condition of habitat was compared among monitoring areas and land use categories. In addition, the habitat condition at random survey sites was compared to that at sites experiencing minimal human disturbance (i.e. reference sites). Potential winter rearing capacity for juvenile coho salmon was calculated for all available habitat and for high quality habitat at the monitoring area scale and in selected population units. We calculated the rearing potential from high quality habitat because modeling (Nickelson and Lawson 1998) demonstrated that during periods of prolonged poor ocean survival, only areas with high quality habitat will be able to support coho at full seeding during poor marine conditions. The final objective of this report is to discuss whether sufficient habitat capacity exists to support productivity of juvenile coho at the monitoring strata scale during periods of low marine survival. Title: The Status and Trend of Physical Habitat and Rearing Potential in Coho Bearing Streams in the Oregon Coastal Coho Evolutionary Significant Unit Report Number: OPSW-ODFW-2009-5 Abstract -- In 1997, the Oregon Coastal Restoration Initiative (OCSRI 1997) identified the quality of stream habitat as a potential factor influencing the decline of coho salmon (Oncorhynchus kisutch) in Oregon coastal streams. In 1998, the Oregon Department of Fish and Wildlife (ODFW) implemented a monitoring program that utilized a random, spatially balanced survey design to provide statistically rigorous information on the status and trend of habitat conditions in Oregon coastal streams. In response to the ESA listing of coho salmon, the State of Oregon published a comprehensive review of aquatic habitat in the Oregon Coastal Coho Evolutionary Significant Unit (ESU) in 2005 (Rodgers et al 2005). The NOAA Fisheries more recently published a request for additional information in the 2009 Federal Register notice (Federal Register / Vol. 74, No. 81 / Wednesday, April 29, 2009). This report will serve as an update to Rodgers et al (2005), and will provide an analysis of the current status and trends in aquatic habitat from 1998 through 2008 within the Oregon Coastal Coho ESU. The status and trend of instream physical habitat conditions in the Oregon Coastal coho ESU were assessed from twelve variables collected by the ODFW habitat monitoring program from 1998-2008. Habitat conditions were described at the scale of the ESU, four monitoring areas/strata within the ESU, and by six land use categories (agriculture, urban, private non-industrial and industrial forest, and public state and federal forest). The condition of habitat was compared among monitoring areas and land use categories. In addition, the habitat condition at random survey sites was compared to that at sites experiencing minimal human disturbance (i.e. reference sites). Potential winter rearing capacity for juvenile coho salmon was calculated for all available habitat and for high quality habitat at the monitoring area scale and in selected population units. We calculated the rearing potential from high quality habitat because modeling (Nickelson and Lawson 1998) demonstrated that during periods of prolonged poor ocean survival, only areas with high quality habitat will be able to support coho at full seeding during poor marine conditions. The final objective of this report is to discuss whether sufficient habitat capacity exists to support productivity of juvenile coho at the monitoring strata scale during periods of low marine survival. Close

• 7. [Article] Salt Creek Watershed Assessment

  Abstract -- The Salt Creek watershed assessment is a publication of the Yamhill Basin Council (YBC) and is a reference tool for landowners, watershed residents, and council members. It contains factual ...

  Citation × Citation Citation Abstract Copy Title: Salt Creek Watershed Assessment Abstract -- The Salt Creek watershed assessment is a publication of the Yamhill Basin Council (YBC) and is a reference tool for landowners, watershed residents, and council members. It contains factual and interpretive information about the condition of the watershed, both past and present. The assessment includes the topics of a Watershed Overview, Historical Conditions, Channel Habitat Types, Vegetation, Riparian and Wetland Conditions, Channel Modifications, Sediments, Hydrology and Water Use, Water Quality, Fish Habitat and Barriers, Restoration and Enhancement Projects, and a Watershed Conditions Summary. Title: Salt Creek Watershed Assessment Abstract -- The Salt Creek watershed assessment is a publication of the Yamhill Basin Council (YBC) and is a reference tool for landowners, watershed residents, and council members. It contains factual and interpretive information about the condition of the watershed, both past and present. The assessment includes the topics of a Watershed Overview, Historical Conditions, Channel Habitat Types, Vegetation, Riparian and Wetland Conditions, Channel Modifications, Sediments, Hydrology and Water Use, Water Quality, Fish Habitat and Barriers, Restoration and Enhancement Projects, and a Watershed Conditions Summary. Close

• 8. [Article] Steelhead Habitat Surveys in Mill Creek Monitoring Project Completion Report (OWEB #205-125)

  Abstract -- This project added to the existing information about steelhead in Mill Creek in the following ways: • Oregon Department of Fish and Wildlife completed an instream habitat inventory from the ...

  Citation × Citation Citation Abstract Copy Title: Steelhead Habitat Surveys in Mill Creek Monitoring Project Completion Report (OWEB #205-125) Abstract -- This project added to the existing information about steelhead in Mill Creek in the following ways: • Oregon Department of Fish and Wildlife completed an instream habitat inventory from the mouth to the forks, up the South Fork to Mill Creek Falls, where anadromy ends, and up the North Fork for the first 7,370 meters. • Oregon Department of Fish and Wildlife conducted steelhead redd surveys in the mainstem and South Fork in 2005 and 2006, while the US Forest Service conducted redd surveys in the federally-owned upper reaches of the North Fork. • Wasco County Soil and Water Conservation District installed depth and temperature monitors on the mainstem and North Fork, while relying on the City of The Dalles to monitor flows in the South Fork. Title: Steelhead Habitat Surveys in Mill Creek Monitoring Project Completion Report (OWEB #205-125) Abstract -- This project added to the existing information about steelhead in Mill Creek in the following ways: • Oregon Department of Fish and Wildlife completed an instream habitat inventory from the mouth to the forks, up the South Fork to Mill Creek Falls, where anadromy ends, and up the North Fork for the first 7,370 meters. • Oregon Department of Fish and Wildlife conducted steelhead redd surveys in the mainstem and South Fork in 2005 and 2006, while the US Forest Service conducted redd surveys in the federally-owned upper reaches of the North Fork. • Wasco County Soil and Water Conservation District installed depth and temperature monitors on the mainstem and North Fork, while relying on the City of The Dalles to monitor flows in the South Fork. Close

• 9. [Article] Douglas County Lakes and Reservoirs Master Plan for Angler Access and Associated Recreational Uses 1968

  Abstract -- Douglas County covers roughly 5,000 square miles of Southwest Oregon and is almost coincidental with the boundaries of the Umpqua River watershed. The topography consists of the Coast Range ...

  Citation × Citation Citation Abstract Copy Title: Douglas County Lakes and Reservoirs Master Plan for Angler Access and Associated Recreational Uses 1968 Abstract -- Douglas County covers roughly 5,000 square miles of Southwest Oregon and is almost coincidental with the boundaries of the Umpqua River watershed. The topography consists of the Coast Range mountains in the west, a central valley area and the Cascade Mountains to the east. Other valley areas are scattered throughout the county. Most of the lakes and impoundments of the county are located in the Cascades to the west and along the coast to the east. While good roads link these lakes with the populated areas of the county, additional developments are needed on about 30 lakes to spread out tourist pressure and help provide quality recreation over more of the county. A few of the larger more popular lakes are crowded to and beyond capacity during the trout season. Potential impoundments for recreation have been recommended at 23 sites. A high priority is placed on establishing warm-water fisheries adjacent to communities where heavy utilization favors better fish growth. Old log-ponds are sometimes used to good advantage for this type of recreation. This report details a plan that we hope can be followed to solve the access problems of the Douglas County lakes and reservoirs. Title: Douglas County Lakes and Reservoirs Master Plan for Angler Access and Associated Recreational Uses 1968 Abstract -- Douglas County covers roughly 5,000 square miles of Southwest Oregon and is almost coincidental with the boundaries of the Umpqua River watershed. The topography consists of the Coast Range mountains in the west, a central valley area and the Cascade Mountains to the east. Other valley areas are scattered throughout the county. Most of the lakes and impoundments of the county are located in the Cascades to the west and along the coast to the east. While good roads link these lakes with the populated areas of the county, additional developments are needed on about 30 lakes to spread out tourist pressure and help provide quality recreation over more of the county. A few of the larger more popular lakes are crowded to and beyond capacity during the trout season. Potential impoundments for recreation have been recommended at 23 sites. A high priority is placed on establishing warm-water fisheries adjacent to communities where heavy utilization favors better fish growth. Old log-ponds are sometimes used to good advantage for this type of recreation. This report details a plan that we hope can be followed to solve the access problems of the Douglas County lakes and reservoirs. Close

• 10. [Article] Indian Creek Aquatic Restoration (OWEB #205-144)

  Abstract -- Like many streams in this area, these creeks have experienced considerable habitat degradation due to past land management practices that removed large wood from the channels. Without the large ...

  Citation × Citation Citation Abstract Copy Title: Indian Creek Aquatic Restoration (OWEB #205-144) Abstract -- Like many streams in this area, these creeks have experienced considerable habitat degradation due to past land management practices that removed large wood from the channels. Without the large wood, spawning gravels have washed away leaving a mostly bedrock substrate. The down-cut stream is no longer connected to its former floodplain and fish have little refuge during high flows. Additionally, aquatic insect life, the basic food source for young salmonids, is limited without the diverse habitats formed by complexes of wood and gravel. Goals associated with this restoration proposal include: • Address limitation to anadromous fish production in Indian Creek tributaries o Enhance spawning, rearing, and overwintering habitat for anadromous and resident fish species o Restore storage capacity (water, substrates, and detritus) of the selected streams to levels more closely expected with unaltered systems in the Coast Range. • Establish a connection between past small scale restoration efforts • Maintain a network of organizations, stakeholders, and individuals who will participate in watershed restoration efforts. Widened channel floodplain from newly derived gravel, side channel formation / channel alteration (with more sinuosity), and additional scour pools were observed throughout the structure sites we monitored since the project implementation from high water events. Especially, the amount of gravel that was delivered to the project reaches and the degree to which they were sorted in large concentration directly adjacent to the helicopter structures was far more prominent than what we have observed in previous years from other helicopter projects. Title: Indian Creek Aquatic Restoration (OWEB #205-144) Abstract -- Like many streams in this area, these creeks have experienced considerable habitat degradation due to past land management practices that removed large wood from the channels. Without the large wood, spawning gravels have washed away leaving a mostly bedrock substrate. The down-cut stream is no longer connected to its former floodplain and fish have little refuge during high flows. Additionally, aquatic insect life, the basic food source for young salmonids, is limited without the diverse habitats formed by complexes of wood and gravel. Goals associated with this restoration proposal include: • Address limitation to anadromous fish production in Indian Creek tributaries o Enhance spawning, rearing, and overwintering habitat for anadromous and resident fish species o Restore storage capacity (water, substrates, and detritus) of the selected streams to levels more closely expected with unaltered systems in the Coast Range. • Establish a connection between past small scale restoration efforts • Maintain a network of organizations, stakeholders, and individuals who will participate in watershed restoration efforts. Widened channel floodplain from newly derived gravel, side channel formation / channel alteration (with more sinuosity), and additional scour pools were observed throughout the structure sites we monitored since the project implementation from high water events. Especially, the amount of gravel that was delivered to the project reaches and the degree to which they were sorted in large concentration directly adjacent to the helicopter structures was far more prominent than what we have observed in previous years from other helicopter projects. Close

• 11. [Article] Information Report 2018-01; Winter Habitat Condition of Oregon Coast Coho Salmon Populations, 2007-2014

  Abstract -- In this report we summarize results of eight years (2007-2014) of habitat surveys for 18 independent Oregon coast coho salmon populations across four monitoring strata (North Coast, Mid Coast, ...

  Citation × Citation Citation Abstract Copy Title: Information Report 2018-01; Winter Habitat Condition of Oregon Coast Coho Salmon Populations, 2007-2014 Abstract -- In this report we summarize results of eight years (2007-2014) of habitat surveys for 18 independent Oregon coast coho salmon populations across four monitoring strata (North Coast, Mid Coast, MidSouth Coast, and Umpqua) in the Oregon Coast Coho Salmon Evolutionary Significant Unit (ESU). We also sampled dependent population blocks across three monitoring strata (North Coast, Mid Coast, and Mid-South Coast). Using a spatially balanced site selection process (Generalized Random Tessellation Stratification; GRTS) we surveyed 451 unique sites within the range of coho salmon spawning or rearing. With the exception of the 2014 survey year, habitat data were collected during winter conditions (February – March). Habitat sampled in 2014 occurred within the summer field season (June – September). We used a Habitat Limiting Factors Model (HLFM) to estimate habitat capacity for winter coho parr and the HabRate model to assess habitat quality for each surveyed stream reach. HLFM estimates were expanded based on the total coho distribution in each population. Based on the habitat data the HLFM predicted the Floras population could support the highest density of juvenile coho (1568 parr/km), while the streams in the Siltcoos watershed could support the least (290 parr/km). At the ESU-level, there was no detectable change of high quality rearing habitat (= 1850 parr/km) when compared to previous studies, but changes were observed among populations over the course of these survey years. We compared individual habitat metrics across populations, land use, geology, and between independent and dependent populations. While no significant differences were observed between independent and dependent populations, differences in habitat metrics were detected among individual populations, land use types, and geologies. In addition, we detected a difference in reproductive habitat quality (spawning and emergence) between both populations and land use types. Title: Information Report 2018-01; Winter Habitat Condition of Oregon Coast Coho Salmon Populations, 2007-2014 Abstract -- In this report we summarize results of eight years (2007-2014) of habitat surveys for 18 independent Oregon coast coho salmon populations across four monitoring strata (North Coast, Mid Coast, MidSouth Coast, and Umpqua) in the Oregon Coast Coho Salmon Evolutionary Significant Unit (ESU). We also sampled dependent population blocks across three monitoring strata (North Coast, Mid Coast, and Mid-South Coast). Using a spatially balanced site selection process (Generalized Random Tessellation Stratification; GRTS) we surveyed 451 unique sites within the range of coho salmon spawning or rearing. With the exception of the 2014 survey year, habitat data were collected during winter conditions (February – March). Habitat sampled in 2014 occurred within the summer field season (June – September). We used a Habitat Limiting Factors Model (HLFM) to estimate habitat capacity for winter coho parr and the HabRate model to assess habitat quality for each surveyed stream reach. HLFM estimates were expanded based on the total coho distribution in each population. Based on the habitat data the HLFM predicted the Floras population could support the highest density of juvenile coho (1568 parr/km), while the streams in the Siltcoos watershed could support the least (290 parr/km). At the ESU-level, there was no detectable change of high quality rearing habitat (= 1850 parr/km) when compared to previous studies, but changes were observed among populations over the course of these survey years. We compared individual habitat metrics across populations, land use, geology, and between independent and dependent populations. While no significant differences were observed between independent and dependent populations, differences in habitat metrics were detected among individual populations, land use types, and geologies. In addition, we detected a difference in reproductive habitat quality (spawning and emergence) between both populations and land use types. Close

• 12. [Article] Information Report 2018-04, Smolt Abundance Estimates for the Oregon Coast Coho Evolutionarily Significant Unit

  Abstract -- Analysis of Coho Salmon (Oncorhynchus kisutch) smolt abundance can provide insight on freshwater habitat capacity and factors affecting salmonid persistence. To explore these relationships ...

  Citation × Citation Citation Abstract Copy Title: Information Report 2018-04, Smolt Abundance Estimates for the Oregon Coast Coho Evolutionarily Significant Unit Abstract -- Analysis of Coho Salmon (Oncorhynchus kisutch) smolt abundance can provide insight on freshwater habitat capacity and factors affecting salmonid persistence. To explore these relationships we linked multi-year data sets of overwinter survival rates from three streams within the Oregon Coast Coho Evolutionarily Significant Unit (OCC) to summer parr abundance estimates from calibrated OCC-wide snorkel survey counts to estimate annual Coho Salmon smolt abundance from 2000-2017. Smolt abundance estimates ranged from a low of 0.9 million in 2000 to a high of 4.1 million in 2013 within the OCC. Accuracy of the smolt abundance estimates was tested using two datasets: (i) adult abundance modeled from the corresponding smolt abundance estimate was compared with adult abundance derived empirically from spawning ground surveys and (ii) our smolt abundance estimates were compared with smolt abundance estimates from trapping efforts in select basins within the OCC. Adult abundance modeled from smolt abundance estimates was highly correlated with adult abundance from spawning ground surveys (r = 0.88, p < 0.001) and smolt abundance estimates correlated with abundance from smolt trapping efforts (r = 0.81, p <0.001). Graphical relationships between smolt abundance and parental abundance suggest that freshwater productivity may be limited in the OCC by density dependent processes at spawner levels observed since 1998. Additionally, smolt abundance estimates have potential use as a variable in adult forecast models and could be used to assess trends in freshwater productivity and to probe factors of density dependence. Title: Information Report 2018-04, Smolt Abundance Estimates for the Oregon Coast Coho Evolutionarily Significant Unit Abstract -- Analysis of Coho Salmon (Oncorhynchus kisutch) smolt abundance can provide insight on freshwater habitat capacity and factors affecting salmonid persistence. To explore these relationships we linked multi-year data sets of overwinter survival rates from three streams within the Oregon Coast Coho Evolutionarily Significant Unit (OCC) to summer parr abundance estimates from calibrated OCC-wide snorkel survey counts to estimate annual Coho Salmon smolt abundance from 2000-2017. Smolt abundance estimates ranged from a low of 0.9 million in 2000 to a high of 4.1 million in 2013 within the OCC. Accuracy of the smolt abundance estimates was tested using two datasets: (i) adult abundance modeled from the corresponding smolt abundance estimate was compared with adult abundance derived empirically from spawning ground surveys and (ii) our smolt abundance estimates were compared with smolt abundance estimates from trapping efforts in select basins within the OCC. Adult abundance modeled from smolt abundance estimates was highly correlated with adult abundance from spawning ground surveys (r = 0.88, p < 0.001) and smolt abundance estimates correlated with abundance from smolt trapping efforts (r = 0.81, p <0.001). Graphical relationships between smolt abundance and parental abundance suggest that freshwater productivity may be limited in the OCC by density dependent processes at spawner levels observed since 1998. Additionally, smolt abundance estimates have potential use as a variable in adult forecast models and could be used to assess trends in freshwater productivity and to probe factors of density dependence. Close

• 13. [Article] Stream Habitat Conditions in Western Oregon 2005 Monitoring Report Report Number: OPSW-ODFW-2007-5

  Abstract -- Monitoring programs under the Oregon Plan for Salmon and Watersheds were designed to assess the status and trend in fish populations and aquatic habitat in Oregon’s coastal basins. Although ...

  Citation × Citation Citation Abstract Copy Title: Stream Habitat Conditions in Western Oregon 2005 Monitoring Report Report Number: OPSW-ODFW-2007-5 Abstract -- Monitoring programs under the Oregon Plan for Salmon and Watersheds were designed to assess the status and trend in fish populations and aquatic habitat in Oregon’s coastal basins. Although the Oregon Plan for Salmon and Watersheds was initiated in response to the petition to list Oregon coastal coho salmon (Oncorhynchus kisutch) as threatened under the Endangered Species Act (ESA), monitoring was subsequently expanded to include other salmonids. Through coordinated surveys we are able to evaluate freshwater habitat, fish distribution, and abundance of juvenile and adult coho salmon and steelhead trout. The habitat survey project has the broadest geographic scope of inference and ties to other program components as well – basin surveys, surveys at habitat restoration sites, adult and juvenile coho surveys, and life cycle watersheds (Flitcroft et al. 2002). The Oregon Plan facilitated cooperation and partnerships to study the contemporary life history dynamics of coho salmon in the Oregon coastal ESU (Evolutionary Significant Unit). A viability and status assessment of Oregon coastal Coho (Chilcote 2005) and the Conservation Plan for the Oregon Coast Coho Evolutionary Significant Unit (Nicholas 2006) evaluated the relationship of aquatic habitat to the productivity of coho salmon populations and recommended actions to promote recovery. The habitat portion of the viability assessment was based on a review of aquatic and riparian habitat collected by the Aquatic Inventories Project (ODFW) from 1990 to 2004 (Rodgers et al. 2005). The authors of the habitat assessment (Rodgers et al 2005) and viability assessment (Chilcote 2005) concluded that coho productivity in 22 coastal coho populations was limited by the complexity of stream habitat used by juvenile coho during their first winter of freshwater residence. The term “stream complexity” integrates geomorphic and structural characteristics of streams and associated aquatic habitat. Complex geomorphic features may be observed in low gradient streams flowing through wide valley floors with multiple channels and off-channel habitats. Structural complexity refers to the size and configuration of pools, large wood pieces and jams, substrate, and undercut banks. The combination of geomorphic and structural features provides cover and refugia during high winter flows for juvenile coho. Stream reaches that can or have the potential to create these conditions are commonly located in lower reaches of moderate size streams in areas with wide valley floors and are considered to contain high quality habitat for juvenile coho. Burnett et al. (2007) developed spatial models to estimate high-quality habitat rearing potential, termed intrinsic potential, in coastal streams. A stream’s intrinsic potential was modeled using valley width, gradient, and stream flow. Historically, streams identified as having high intrinsic potential may have been the most productive for juvenile coho salmon; restoration of these reaches may be the key to recovery of coho salmon. The viability assessment and Coho Plan recommend that we monitor the trends in total amount and spatial distribution of these habitats in coastal drainages. This report discusses the findings from aquatic habitat surveys conducted in summer 2005 in coastal drainages. Our objectives are to describe and compare channel morphology, instream habitat and complexity, and riparian conditions in all wadeable streams in five monitoring areas. The sample design permitted us to post stratify the sample sites into three additional frames: sites within coho and steelhead distribution, sites outside coho distribution, and sites within high intrinsic potential for coho. We also used two habitat models to integrate habitat attributes to describe the habitat quality and capacity for different life stages of juvenile coho and steelhead. Title: Stream Habitat Conditions in Western Oregon 2005 Monitoring Report Report Number: OPSW-ODFW-2007-5 Abstract -- Monitoring programs under the Oregon Plan for Salmon and Watersheds were designed to assess the status and trend in fish populations and aquatic habitat in Oregon’s coastal basins. Although the Oregon Plan for Salmon and Watersheds was initiated in response to the petition to list Oregon coastal coho salmon (Oncorhynchus kisutch) as threatened under the Endangered Species Act (ESA), monitoring was subsequently expanded to include other salmonids. Through coordinated surveys we are able to evaluate freshwater habitat, fish distribution, and abundance of juvenile and adult coho salmon and steelhead trout. The habitat survey project has the broadest geographic scope of inference and ties to other program components as well – basin surveys, surveys at habitat restoration sites, adult and juvenile coho surveys, and life cycle watersheds (Flitcroft et al. 2002). The Oregon Plan facilitated cooperation and partnerships to study the contemporary life history dynamics of coho salmon in the Oregon coastal ESU (Evolutionary Significant Unit). A viability and status assessment of Oregon coastal Coho (Chilcote 2005) and the Conservation Plan for the Oregon Coast Coho Evolutionary Significant Unit (Nicholas 2006) evaluated the relationship of aquatic habitat to the productivity of coho salmon populations and recommended actions to promote recovery. The habitat portion of the viability assessment was based on a review of aquatic and riparian habitat collected by the Aquatic Inventories Project (ODFW) from 1990 to 2004 (Rodgers et al. 2005). The authors of the habitat assessment (Rodgers et al 2005) and viability assessment (Chilcote 2005) concluded that coho productivity in 22 coastal coho populations was limited by the complexity of stream habitat used by juvenile coho during their first winter of freshwater residence. The term “stream complexity” integrates geomorphic and structural characteristics of streams and associated aquatic habitat. Complex geomorphic features may be observed in low gradient streams flowing through wide valley floors with multiple channels and off-channel habitats. Structural complexity refers to the size and configuration of pools, large wood pieces and jams, substrate, and undercut banks. The combination of geomorphic and structural features provides cover and refugia during high winter flows for juvenile coho. Stream reaches that can or have the potential to create these conditions are commonly located in lower reaches of moderate size streams in areas with wide valley floors and are considered to contain high quality habitat for juvenile coho. Burnett et al. (2007) developed spatial models to estimate high-quality habitat rearing potential, termed intrinsic potential, in coastal streams. A stream’s intrinsic potential was modeled using valley width, gradient, and stream flow. Historically, streams identified as having high intrinsic potential may have been the most productive for juvenile coho salmon; restoration of these reaches may be the key to recovery of coho salmon. The viability assessment and Coho Plan recommend that we monitor the trends in total amount and spatial distribution of these habitats in coastal drainages. This report discusses the findings from aquatic habitat surveys conducted in summer 2005 in coastal drainages. Our objectives are to describe and compare channel morphology, instream habitat and complexity, and riparian conditions in all wadeable streams in five monitoring areas. The sample design permitted us to post stratify the sample sites into three additional frames: sites within coho and steelhead distribution, sites outside coho distribution, and sites within high intrinsic potential for coho. We also used two habitat models to integrate habitat attributes to describe the habitat quality and capacity for different life stages of juvenile coho and steelhead. Close

• 14. [Article] Juvenile Salmonid Monitoring In Coastal Oregon and Lower Columbia Streams, 2016 Report Number: OPSW-ODFW-2017-1

  Abstract -- This report analyzes monitoring data for juvenile Coho Salmon in three Evolutionarily Significant Units (ESUs) and juvenile steelhead in four Distinct Population Segments (DPSs) in western ...

  Citation × Citation Citation Abstract Copy Title: Juvenile Salmonid Monitoring In Coastal Oregon and Lower Columbia Streams, 2016 Report Number: OPSW-ODFW-2017-1 Abstract -- This report analyzes monitoring data for juvenile Coho Salmon in three Evolutionarily Significant Units (ESUs) and juvenile steelhead in four Distinct Population Segments (DPSs) in western Oregon. Monitoring data are used to evaluate trends in salmonid distribution and abundance, which inform conservation and recovery decisions. The analysis in this report spans the years 1998-2016. Previous annual reports can be found at: https://nrimp.dfw.state.or.us/crl/default.aspx?pn=WORP. Juvenile Coho Salmon: For both the Oregon Coast Coho (OCC) and Lower Columbia River (LCR) ESUs, abundance estimates were lower in 2016 relative to the average from the 2013-2015 broods. The 2016 LCR abundance estimate was the lowest recorded in the 11 years of monitoring in this ESU. In the Southern Oregon Northern California Coho (SONCC) ESU the 2016 abundance estimate was similar to the average of the estimates for the 2013- 2015 broods. The 2016 estimate of site occupancy, relative to the estimate for the 2013- 2015 broods, was lower in the LCR, and similar in the OCC and the SONCC. As with the abundance estimate for the LCR, the 2016 estimate of site occupancy was the lowest recorded since monitoring began in the ESU. In the OCC there is some indication from Coho Salmon survey data that freshwater productivity rates are regulated by compensatory density dependence at one or several early life stages. In the OCC metapopulation, the spawner:summer parr (recruit) curve is sigmoidal in years of higher female spawner abundance, suggesting some factor (or combination of factors) that sets juvenile carrying capacity. A density dependent pattern has not been observed in the LCR, likely due to relatively low seeding levels in the ESU. For the SONCC there are insufficient adult data to perform these analyses. Juvenile Steelhead: For the Oregon Coast (OC) and the Klamath Mountains Provence (KMP) DPSs, the average of the abundance estimates for the 2014-2016 broods was similar to the average for the 2010-2013 broods. The 2016 abundance estimate was similar to the average of the 2006-2015 estimates in the South West Washington (SWW) DPS and lower than the average of the 2006-2015 estimates in the Lower Columbia River (LCR) DPS. Site occupancy estimates in the OC and KMP in the 2014-2016 broods were similar to the estimates for the 2010-2013 broods. Site occupancy estimates in 2016, relative to the average of the 2006-2015 estimates, were similar in the SWW and lower in the LCR. From 1998 to 2009 pools were required to be =40cm in maximum depth to meet survey protocols. This was changed to =20cm in maximum depth in 2010. Analyses based on the =20cm maximum depth criteria, relative to the =40cm maximum depth criteria, typically produce increases in site occupancy rates and larger abundance estimates with proportionately smaller confidence intervals. Abundance estimate trends that included shallow pools tracked with those based on the former pool criteria. Title: Juvenile Salmonid Monitoring In Coastal Oregon and Lower Columbia Streams, 2016 Report Number: OPSW-ODFW-2017-1 Abstract -- This report analyzes monitoring data for juvenile Coho Salmon in three Evolutionarily Significant Units (ESUs) and juvenile steelhead in four Distinct Population Segments (DPSs) in western Oregon. Monitoring data are used to evaluate trends in salmonid distribution and abundance, which inform conservation and recovery decisions. The analysis in this report spans the years 1998-2016. Previous annual reports can be found at: https://nrimp.dfw.state.or.us/crl/default.aspx?pn=WORP. Juvenile Coho Salmon: For both the Oregon Coast Coho (OCC) and Lower Columbia River (LCR) ESUs, abundance estimates were lower in 2016 relative to the average from the 2013-2015 broods. The 2016 LCR abundance estimate was the lowest recorded in the 11 years of monitoring in this ESU. In the Southern Oregon Northern California Coho (SONCC) ESU the 2016 abundance estimate was similar to the average of the estimates for the 2013- 2015 broods. The 2016 estimate of site occupancy, relative to the estimate for the 2013- 2015 broods, was lower in the LCR, and similar in the OCC and the SONCC. As with the abundance estimate for the LCR, the 2016 estimate of site occupancy was the lowest recorded since monitoring began in the ESU. In the OCC there is some indication from Coho Salmon survey data that freshwater productivity rates are regulated by compensatory density dependence at one or several early life stages. In the OCC metapopulation, the spawner:summer parr (recruit) curve is sigmoidal in years of higher female spawner abundance, suggesting some factor (or combination of factors) that sets juvenile carrying capacity. A density dependent pattern has not been observed in the LCR, likely due to relatively low seeding levels in the ESU. For the SONCC there are insufficient adult data to perform these analyses. Juvenile Steelhead: For the Oregon Coast (OC) and the Klamath Mountains Provence (KMP) DPSs, the average of the abundance estimates for the 2014-2016 broods was similar to the average for the 2010-2013 broods. The 2016 abundance estimate was similar to the average of the 2006-2015 estimates in the South West Washington (SWW) DPS and lower than the average of the 2006-2015 estimates in the Lower Columbia River (LCR) DPS. Site occupancy estimates in the OC and KMP in the 2014-2016 broods were similar to the estimates for the 2010-2013 broods. Site occupancy estimates in 2016, relative to the average of the 2006-2015 estimates, were similar in the SWW and lower in the LCR. From 1998 to 2009 pools were required to be =40cm in maximum depth to meet survey protocols. This was changed to =20cm in maximum depth in 2010. Analyses based on the =20cm maximum depth criteria, relative to the =40cm maximum depth criteria, typically produce increases in site occupancy rates and larger abundance estimates with proportionately smaller confidence intervals. Abundance estimate trends that included shallow pools tracked with those based on the former pool criteria. Close

• 15. [Article] Effectiveness Monitoring Report for the Western Oregon Stream Restoration Program, 1999-2008 Report Number: OPSW-ODFW-2010-6

  Abstract -- State and federal agencies have invested millions of dollars to restore streams and watersheds in the Pacific Northwest over the past two decades. In Oregon alone, over 500 million dollars ...

  Citation × Citation Citation Abstract Copy Title: Effectiveness Monitoring Report for the Western Oregon Stream Restoration Program, 1999-2008 Report Number: OPSW-ODFW-2010-6 Abstract -- State and federal agencies have invested millions of dollars to restore streams and watersheds in the Pacific Northwest over the past two decades. In Oregon alone, over 500 million dollars has been spent on completed projects from 1995 to 2007 (Oregon Watershed Enhancement Board 2009). Restoration practitioners have distributed the investment among watershed scale activities such as road repair, dam removal, and upland management, and stream scale activities such as passage, instream complexity, and riparian plantings. The Western Oregon Stream Restoration Program (WOSRP) was established to work in cooperation with private and corporate landowners to restore stream habitat for juvenile and adult salmonids. In addition to the WOSRP, the Oregon Watershed Enhancement Board (OWEB) funds restoration projects with local watershed councils, who commonly partner with state and federal agencies. Eight WOSRP restoration biologists in Tillamook, Newport, Charleston, Gold Beach, Roseburg, Clackamas, and Salem select sites and implement projects consistent with the criteria described in Thom et al (2001). A monitoring component is integrated in the program, with surveys coordinated and reported by a biologist in Corvallis. The goal of the monitoring program is to assess the long term effectiveness of instream restoration projects implemented by WOSRP, and to evaluate progress towards salmon conservation and recovery goals in Oregon’s coastal basins. The WOSRP restoration sites are distributed throughout the Willamette, Lower Columbia, and coastal drainage's. Restoration treatments added large wood and/or boulders, improved fish passage, planted trees in riparian areas, or were a combination of the three. Large wood was placed in complex jams at intervals throughout the stream to increase stream roughness and complexity. Boulders were sometimes used in conjunction with wood jams to provide stability to the structures, and prevent large wood from moving downstream and posing a hazard to culverts and bridges. Bedrock dominated streams were often treated with boulders to collect gravel and cobble, intended to aggrade the streambed. In the future, large wood may be added to these streams. Fish passage projects opened previously inaccessible habitat to juvenile and/or adult salmonids while riparian plantings and fencing were designed to improve riparian vegetation and bank structure. The project length varied from site to site. Fish passage sites were quite short, but provided access to kilometers of fish habitat, and large wood sites were up to several kilometers in length. Large wood and boulder placement projects have become commonplace in the Pacific Northwest to restore complex stream habitat for juvenile coho and other salmonids (Katz et al. 2007, Roni et al. 2008). Detailed assessments have been published for individual projects or experiments (e.g. Moore and Gregory, 1988, Nickelson et al. 1992, Cederholm et al.1997). More extensive evaluations have used a post treatment design (Hicks et al 1991, Roni and Quinn 2001), but none have used a pre- and post treatment design. In this paper we evaluate habitat changes at 103 restoration projects in western Oregon from pre-treatment to one year post treatment to 6 years following treatment. Projects commonly treated 0.5 – 1 km of stream, but some extended up to 6 km. The projects we evaluated in this paper were treated with large logs, usually arranged in jams, and were not cabled or driven into banks or bottom. As of 2008, the OWEB and WOSRP projects have treated approximately 750 km of stream with large wood (Figure 1), 120 km with boulders, and over 4,000 km of stream have been made accessible by replacing and/or removing culverts. Each year, OWEB receives 210 grant applications for restoration projects. These projects generally adhere to a similar selection process and design, so the results of this study can be expected to apply more broadly within the Pacific Northwest. Roni et al (2008), in a synthesis paper, summarized many of the potential physical benefits of restoration; these include pool depth and frequency, habitat complexity, woody debris, and sediment retention and quality of spawning gravel. Some projects in deeply incised channels have reduced the incision and increased bed elevation. Evaluations of biological responses have been confounded by natural variability of populations, duration of study, or length of stream examined. For example, determination of success based on spawning ground counts is problematic because of variation in ocean survival. However, longer duration and watershed scale studies have shown positive responses of juvenile and adult salmon (Johnson et al 2005). Burnett et al. (2008) conducted a systematic review of peer-reviewed articles to examine the effects of large wood placement on salmonid abundance, growth, or survival, or on overall stream habitat complexity. Few publications were both relevant and met the rigorous standards outlined in their review. Although the review supported short term improvements in habitat complexity, the relationship to salmonid productivity was less definitive. Notable exceptions included Johnson et al. (2005) cited above, and Solazzi et al. (2000). An alternative approach to directly assessing biological response is to model potential changes in abundance or productivity. The Habitat Limiting Factors Model (Reeves et al. 1989, Nickelson et al.1992a, Nickelson 1998) was developed to quantify the carrying capacity of coastal streams for juvenile coho during the summer and winter. Use of this model is appropriate because most of the instream restoration projects in western Oregon were intended to improve habitat for juvenile coho. In this paper, we evaluated the physical response directly, and quantified the potential response of juvenile coho salmon by application of the Habitat Limiting Factors Model. Project effectiveness monitoring requires linking the restoration treatment to improved physical conditions for and biological response of salmon (Katz et al. 2007) and defining desired outcomes (Rumps et al. 2007). Because the WOSRP projects were designed to improve ecological and hydrologic stream function specifically for salmonids, we evaluated 1) retention of wood structures, 2) natural recruitment of additional wood, 3) increase in pool number, area, and depth, 4) retention of gravels and sorting of finer substrates, and 5) increase in channel complexity – secondary channels and off-channel habitats. Biological evaluation was based on estimates of the potential carrying capacity for juvenile coho during the overwinter life stage. The primary objectives of this evaluation are to test for these changes one year following treatment and 6 years following treatment. Secondarily, we evaluated the response of the projects by geographic location and position along the stream network. Previous WOSRP monitoring reports (e.g. Jacobsen and Jones 2003, Jacobsen et al. 2007) have focused on conditions one year following treatment, with relatively few sites assessed 2-3 years following restoration. Since 2003, the restoration projects have increased in complexity – more and larger pieces and jams, and treated more kilometers of stream length per site. The WOSRP program has provided a unique opportunity to evaluate the effects of restoration projects over longer times and broader geographic scales than previously feasible. We have been surveying the restoration sites in both summer and winter to monitor changes in stream habitat and evaluate the success of treatments, such as the placement of wood and/or boulders and fish passage. Surveys are logistically easier to manage in the summer, but surveys conducted during the winter provide a more timely and accurate assessment of over-winter rearing potential for juvenile coho. Because we have paired surveys, we are able to assess the added value of revisits across seasons. We test the hypothesis that habitat characteristics at the restoration sites do not change from summer to winter. The findings permit us to modify the survey program if the information is duplicative, and use the resources in another fashion. Title: Effectiveness Monitoring Report for the Western Oregon Stream Restoration Program, 1999-2008 Report Number: OPSW-ODFW-2010-6 Abstract -- State and federal agencies have invested millions of dollars to restore streams and watersheds in the Pacific Northwest over the past two decades. In Oregon alone, over 500 million dollars has been spent on completed projects from 1995 to 2007 (Oregon Watershed Enhancement Board 2009). Restoration practitioners have distributed the investment among watershed scale activities such as road repair, dam removal, and upland management, and stream scale activities such as passage, instream complexity, and riparian plantings. The Western Oregon Stream Restoration Program (WOSRP) was established to work in cooperation with private and corporate landowners to restore stream habitat for juvenile and adult salmonids. In addition to the WOSRP, the Oregon Watershed Enhancement Board (OWEB) funds restoration projects with local watershed councils, who commonly partner with state and federal agencies. Eight WOSRP restoration biologists in Tillamook, Newport, Charleston, Gold Beach, Roseburg, Clackamas, and Salem select sites and implement projects consistent with the criteria described in Thom et al (2001). A monitoring component is integrated in the program, with surveys coordinated and reported by a biologist in Corvallis. The goal of the monitoring program is to assess the long term effectiveness of instream restoration projects implemented by WOSRP, and to evaluate progress towards salmon conservation and recovery goals in Oregon’s coastal basins. The WOSRP restoration sites are distributed throughout the Willamette, Lower Columbia, and coastal drainage's. Restoration treatments added large wood and/or boulders, improved fish passage, planted trees in riparian areas, or were a combination of the three. Large wood was placed in complex jams at intervals throughout the stream to increase stream roughness and complexity. Boulders were sometimes used in conjunction with wood jams to provide stability to the structures, and prevent large wood from moving downstream and posing a hazard to culverts and bridges. Bedrock dominated streams were often treated with boulders to collect gravel and cobble, intended to aggrade the streambed. In the future, large wood may be added to these streams. Fish passage projects opened previously inaccessible habitat to juvenile and/or adult salmonids while riparian plantings and fencing were designed to improve riparian vegetation and bank structure. The project length varied from site to site. Fish passage sites were quite short, but provided access to kilometers of fish habitat, and large wood sites were up to several kilometers in length. Large wood and boulder placement projects have become commonplace in the Pacific Northwest to restore complex stream habitat for juvenile coho and other salmonids (Katz et al. 2007, Roni et al. 2008). Detailed assessments have been published for individual projects or experiments (e.g. Moore and Gregory, 1988, Nickelson et al. 1992, Cederholm et al.1997). More extensive evaluations have used a post treatment design (Hicks et al 1991, Roni and Quinn 2001), but none have used a pre- and post treatment design. In this paper we evaluate habitat changes at 103 restoration projects in western Oregon from pre-treatment to one year post treatment to 6 years following treatment. Projects commonly treated 0.5 – 1 km of stream, but some extended up to 6 km. The projects we evaluated in this paper were treated with large logs, usually arranged in jams, and were not cabled or driven into banks or bottom. As of 2008, the OWEB and WOSRP projects have treated approximately 750 km of stream with large wood (Figure 1), 120 km with boulders, and over 4,000 km of stream have been made accessible by replacing and/or removing culverts. Each year, OWEB receives 210 grant applications for restoration projects. These projects generally adhere to a similar selection process and design, so the results of this study can be expected to apply more broadly within the Pacific Northwest. Roni et al (2008), in a synthesis paper, summarized many of the potential physical benefits of restoration; these include pool depth and frequency, habitat complexity, woody debris, and sediment retention and quality of spawning gravel. Some projects in deeply incised channels have reduced the incision and increased bed elevation. Evaluations of biological responses have been confounded by natural variability of populations, duration of study, or length of stream examined. For example, determination of success based on spawning ground counts is problematic because of variation in ocean survival. However, longer duration and watershed scale studies have shown positive responses of juvenile and adult salmon (Johnson et al 2005). Burnett et al. (2008) conducted a systematic review of peer-reviewed articles to examine the effects of large wood placement on salmonid abundance, growth, or survival, or on overall stream habitat complexity. Few publications were both relevant and met the rigorous standards outlined in their review. Although the review supported short term improvements in habitat complexity, the relationship to salmonid productivity was less definitive. Notable exceptions included Johnson et al. (2005) cited above, and Solazzi et al. (2000). An alternative approach to directly assessing biological response is to model potential changes in abundance or productivity. The Habitat Limiting Factors Model (Reeves et al. 1989, Nickelson et al.1992a, Nickelson 1998) was developed to quantify the carrying capacity of coastal streams for juvenile coho during the summer and winter. Use of this model is appropriate because most of the instream restoration projects in western Oregon were intended to improve habitat for juvenile coho. In this paper, we evaluated the physical response directly, and quantified the potential response of juvenile coho salmon by application of the Habitat Limiting Factors Model. Project effectiveness monitoring requires linking the restoration treatment to improved physical conditions for and biological response of salmon (Katz et al. 2007) and defining desired outcomes (Rumps et al. 2007). Because the WOSRP projects were designed to improve ecological and hydrologic stream function specifically for salmonids, we evaluated 1) retention of wood structures, 2) natural recruitment of additional wood, 3) increase in pool number, area, and depth, 4) retention of gravels and sorting of finer substrates, and 5) increase in channel complexity – secondary channels and off-channel habitats. Biological evaluation was based on estimates of the potential carrying capacity for juvenile coho during the overwinter life stage. The primary objectives of this evaluation are to test for these changes one year following treatment and 6 years following treatment. Secondarily, we evaluated the response of the projects by geographic location and position along the stream network. Previous WOSRP monitoring reports (e.g. Jacobsen and Jones 2003, Jacobsen et al. 2007) have focused on conditions one year following treatment, with relatively few sites assessed 2-3 years following restoration. Since 2003, the restoration projects have increased in complexity – more and larger pieces and jams, and treated more kilometers of stream length per site. The WOSRP program has provided a unique opportunity to evaluate the effects of restoration projects over longer times and broader geographic scales than previously feasible. We have been surveying the restoration sites in both summer and winter to monitor changes in stream habitat and evaluate the success of treatments, such as the placement of wood and/or boulders and fish passage. Surveys are logistically easier to manage in the summer, but surveys conducted during the winter provide a more timely and accurate assessment of over-winter rearing potential for juvenile coho. Because we have paired surveys, we are able to assess the added value of revisits across seasons. We test the hypothesis that habitat characteristics at the restoration sites do not change from summer to winter. The findings permit us to modify the survey program if the information is duplicative, and use the resources in another fashion. Close

• 16. [Article] Recovery of Wild Coho Salmon In Salmon River Basin, 2008-2010 Report Number: OPSW-ODFW-2011-10

  Abstract -- Hatcheries have been a centerpiece of salmon management in the Pacific Northwest for more than a century but recent evidence of adverse interactions between hatchery and naturally-produced ...

  Citation × Citation Citation Abstract Copy Title: Recovery of Wild Coho Salmon In Salmon River Basin, 2008-2010 Report Number: OPSW-ODFW-2011-10 Abstract -- Hatcheries have been a centerpiece of salmon management in the Pacific Northwest for more than a century but recent evidence of adverse interactions between hatchery and naturally-produced salmon have resulted in substantial changes in many hatchery programs. In 2007 the Oregon Department of Fish and Wildlife terminated a 30-year artificial propagation program for coho salmon in the Salmon River basin after a status assessment concluded that wild population viability was threatened by hatchery effects on salmon productivity (Chilcote et al. 2005). Hatchery-reared coho comprised 50-100% of the naturally spawning population in recent years. Low productivity was reflected in a low spawner to recruit ratio, and life-stage specific survival was lower than that of nearby populations. The temporal distribution of adult spawning in the basin was truncated and peaked 1.5 months earlier relative to the pre-hatchery period and adjacent coastal populations. The cessation of hatchery releases into Salmon River not only removed the primary factor believed to limit productivity of the local population, it also constituted a rare management experiment to test whether a naturally-spawning population can recover from a prolonged period of low abundance after interactions with hatchery-produced coho salmon are eliminated. This report summarizes the results of coho population studies at Salmon River for the first three years after the hatchery program was discontinued. The study in Salmon River is timely because ecological interactions between hatchery and wild fish have been implicated in the reduced survival and decreased productivity of wild coho and other salmonid populations (Nickelson 2003, Buhle et al. 2009, Chilcote et al. 2011). Recent studies involving a diversity of salmonid species and watersheds have shown a negative relationship between hatchery spawner abundance and wild population productivity regardless of the duration of hatchery influence (Chilcote et al. 2011). Yet neither the mechanisms of these productivity declines nor their potential reversibility have been investigated. Recent management changes at Salmon River provide an opportunity to experimentally evaluate coho salmon survival and productivity following the elimination of a decades-long hatchery program. The results will provide new insights into the reversibility of hatchery effects and the rate, mechanisms, and trajectory of response by a naturally spawning coho salmon population. Hatchery programs have been shown to change the timing and distribution of naturally spawning adults, but ecological and genetic influences on the spatial structure and life history diversity of juvenile populations are poorly understood. Conventional understanding of the life history of juvenile coho has presumed a relatively fixed pattern of rearing and migration. However, recent studies have found much greater variation in juvenile life history and habitat-use patterns than previously expected (Miller and Sadro 2003, Koski 2009), including evidence that estuaries may play a prominent role in the life histories of some coho salmon populations. A recent study in the Salmon River basin found considerable diversity in the life histories of juvenile Chinook salmon, including extended rearing by fry and other subyearling migrants within the complex network of natural and restored estuarine wetlands (Bottom et al. 2005). Unfortunately, interpretation of juvenile life history variations at Salmon River was confounded by the Chinook hatchery program, which has concentrated spawning activity in the lower river near the hatchery and may directly influence juvenile migration and rearing patterns. Discontinuation of the coho hatchery program at Salmon River provides an opportunity to quantify changes in juvenile life history following the elimination of all hatchery-fish interactions with the naturally spawning population. Such responses may provide important insights into the mechanisms of hatchery influence on wild salmon productivity and population resilience. Our research integrates adult and juvenile life stages, examines linkages to physical habitat conditions in fresh water and the estuary, and describes variability between juvenile performance and adult returns. It also monitors the coho salmon population across habitat types and life history stages to identify population responses at a landscape scale. We will determine productivity and survival at each salmon life stage and monitor the response of the adult population following the cessation of the coho salmon hatchery program. From these indicators, we will determine the potential resiliency of the coho salmon population, and evaluate the biological benefits or tradeoffs of returning the ecosystem to natural salmon production. Our study design encompasses four population phases: (1) pre-hatchery conditions (Mullen 1979), (2) dominance by hatchery-reared spawners (2008), (3) first generation naturally produced juveniles (2009-2011), and (4) second generation naturally produced juveniles (starting in 2012). This research will validate assumptions about factors limiting coho recovery and determine whether recovery actions have been effective. Here, we report on findings from 2008-2010 to address four principal objectives: 1. Quantify life stage specific survival and recruits per spawner ratio of the coho salmon population before and after hatchery coho salmon are removed from Salmon River. 2. Assess whether the Salmon River coho population is limited by capacity and complexity of stream habitat. 3. Describe the diversity of juvenile and adult life histories of coho salmon in the Salmon River basin, and estimate the relative contributions of various juvenile life histories to adult returns. 4. Determine seasonal use of the Salmon River estuary and its tidally-inundated wetlands by juvenile coho salmon. The field sampling that supported the study on coho salmon also captured Chinook salmon and steelhead and cutthroat trout during routine sampling in the watershed and estuary. This report emphasizes coho salmon results, but also summarizes catch, distribution, and migration data for other salmonids to compare densities and abundances in freshwater and the estuary. Additional results for Chinook, steelhead, and cutthroat are presented in Appendix A. See Stein et al. (2011) for more detailed information on life history diversity, migration patterns, habitat use, and abundance of cutthroat trout. Title: Recovery of Wild Coho Salmon In Salmon River Basin, 2008-2010 Report Number: OPSW-ODFW-2011-10 Abstract -- Hatcheries have been a centerpiece of salmon management in the Pacific Northwest for more than a century but recent evidence of adverse interactions between hatchery and naturally-produced salmon have resulted in substantial changes in many hatchery programs. In 2007 the Oregon Department of Fish and Wildlife terminated a 30-year artificial propagation program for coho salmon in the Salmon River basin after a status assessment concluded that wild population viability was threatened by hatchery effects on salmon productivity (Chilcote et al. 2005). Hatchery-reared coho comprised 50-100% of the naturally spawning population in recent years. Low productivity was reflected in a low spawner to recruit ratio, and life-stage specific survival was lower than that of nearby populations. The temporal distribution of adult spawning in the basin was truncated and peaked 1.5 months earlier relative to the pre-hatchery period and adjacent coastal populations. The cessation of hatchery releases into Salmon River not only removed the primary factor believed to limit productivity of the local population, it also constituted a rare management experiment to test whether a naturally-spawning population can recover from a prolonged period of low abundance after interactions with hatchery-produced coho salmon are eliminated. This report summarizes the results of coho population studies at Salmon River for the first three years after the hatchery program was discontinued. The study in Salmon River is timely because ecological interactions between hatchery and wild fish have been implicated in the reduced survival and decreased productivity of wild coho and other salmonid populations (Nickelson 2003, Buhle et al. 2009, Chilcote et al. 2011). Recent studies involving a diversity of salmonid species and watersheds have shown a negative relationship between hatchery spawner abundance and wild population productivity regardless of the duration of hatchery influence (Chilcote et al. 2011). Yet neither the mechanisms of these productivity declines nor their potential reversibility have been investigated. Recent management changes at Salmon River provide an opportunity to experimentally evaluate coho salmon survival and productivity following the elimination of a decades-long hatchery program. The results will provide new insights into the reversibility of hatchery effects and the rate, mechanisms, and trajectory of response by a naturally spawning coho salmon population. Hatchery programs have been shown to change the timing and distribution of naturally spawning adults, but ecological and genetic influences on the spatial structure and life history diversity of juvenile populations are poorly understood. Conventional understanding of the life history of juvenile coho has presumed a relatively fixed pattern of rearing and migration. However, recent studies have found much greater variation in juvenile life history and habitat-use patterns than previously expected (Miller and Sadro 2003, Koski 2009), including evidence that estuaries may play a prominent role in the life histories of some coho salmon populations. A recent study in the Salmon River basin found considerable diversity in the life histories of juvenile Chinook salmon, including extended rearing by fry and other subyearling migrants within the complex network of natural and restored estuarine wetlands (Bottom et al. 2005). Unfortunately, interpretation of juvenile life history variations at Salmon River was confounded by the Chinook hatchery program, which has concentrated spawning activity in the lower river near the hatchery and may directly influence juvenile migration and rearing patterns. Discontinuation of the coho hatchery program at Salmon River provides an opportunity to quantify changes in juvenile life history following the elimination of all hatchery-fish interactions with the naturally spawning population. Such responses may provide important insights into the mechanisms of hatchery influence on wild salmon productivity and population resilience. Our research integrates adult and juvenile life stages, examines linkages to physical habitat conditions in fresh water and the estuary, and describes variability between juvenile performance and adult returns. It also monitors the coho salmon population across habitat types and life history stages to identify population responses at a landscape scale. We will determine productivity and survival at each salmon life stage and monitor the response of the adult population following the cessation of the coho salmon hatchery program. From these indicators, we will determine the potential resiliency of the coho salmon population, and evaluate the biological benefits or tradeoffs of returning the ecosystem to natural salmon production. Our study design encompasses four population phases: (1) pre-hatchery conditions (Mullen 1979), (2) dominance by hatchery-reared spawners (2008), (3) first generation naturally produced juveniles (2009-2011), and (4) second generation naturally produced juveniles (starting in 2012). This research will validate assumptions about factors limiting coho recovery and determine whether recovery actions have been effective. Here, we report on findings from 2008-2010 to address four principal objectives: 1. Quantify life stage specific survival and recruits per spawner ratio of the coho salmon population before and after hatchery coho salmon are removed from Salmon River. 2. Assess whether the Salmon River coho population is limited by capacity and complexity of stream habitat. 3. Describe the diversity of juvenile and adult life histories of coho salmon in the Salmon River basin, and estimate the relative contributions of various juvenile life histories to adult returns. 4. Determine seasonal use of the Salmon River estuary and its tidally-inundated wetlands by juvenile coho salmon. The field sampling that supported the study on coho salmon also captured Chinook salmon and steelhead and cutthroat trout during routine sampling in the watershed and estuary. This report emphasizes coho salmon results, but also summarizes catch, distribution, and migration data for other salmonids to compare densities and abundances in freshwater and the estuary. Additional results for Chinook, steelhead, and cutthroat are presented in Appendix A. See Stein et al. (2011) for more detailed information on life history diversity, migration patterns, habitat use, and abundance of cutthroat trout. Close