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• 1. [Article] Little Deschutes Subbasin Watershed Assessment

  Abstract -- Many of the impacts to fish and wildlife habitat and water quality in the Little Deschutes River Subbasin are concentrated in the areas of housing, roads, and other human development. Most ...

  Citation × Citation Citation Abstract Copy Title: Little Deschutes Subbasin Watershed Assessment Abstract -- Many of the impacts to fish and wildlife habitat and water quality in the Little Deschutes River Subbasin are concentrated in the areas of housing, roads, and other human development. Most of the human population in the subbasin is concentrated around the community centers of La Pine, Gilchrist, Crescent, and Crescent Lake. There is significant dispersed development along the lower reaches of the Little Deschutes River between the communities of Sunriver and La Pine -an area characterized by gentle topography and depressions with forested wetlands, marshes and shallow lakes. Streams in this area, as illustrated by the Little Deschutes River , are low gradient and originate in the high elevation areas in the southwest portion of the watershed where there is higher precipitation. This ownership pattern has significant implications for natural resource management, as lower gradient floodplain areas tend to provide important wetland, fish, and wildlife habitat. Key Findings Fuel Loading: Having homes safe from wildfires is a concern for many residents. Fire suppression has increased the amount of dry wood in the area, creating a ready source for major wildfires. Riparian Areas and Wetlands: Loss of wetland and riparian areas , especially in the lower areas along the Little Deschutes River , has affected a number of resources. Water quality has been affected by the reduced wetlands that act as filters of nitrogen; the loss of streamside trees and other vegetation reduces shade that helps to cool water temperatures. Finally, loss ofwetlands and riparian vegetation has reduced important fish and wildlife habitats. Wildlife: The growth and development have altered wildlife habitats. Loss of wetlands, streamside vegetation, and other changes in the watershed have reduced important wildlife habitat. Roads and development have impacted migrating mule deer, increasing collisions between deer and cars and altering their migration pathways. Fish: There has been a significant loss of native trout and an increase in introduced brook and brown trout in the Little Deschutes River and tributaries. Loss of native trout is from competition with introduced species and changes in aquatic habitat and water temperatures. Water Quality: A major concern about the water in the river is unusually high temperatures in the summer and the abnormal growth of algae. Other studies indicated that there are problems with groundwater loading ofnitrogen. The high water table (with associated wetlands), and porous pumice soils contributes to increased nitrates, a by-product of septic systems and an indicator of human pathogens. Title: Little Deschutes Subbasin Watershed Assessment Abstract -- Many of the impacts to fish and wildlife habitat and water quality in the Little Deschutes River Subbasin are concentrated in the areas of housing, roads, and other human development. Most of the human population in the subbasin is concentrated around the community centers of La Pine, Gilchrist, Crescent, and Crescent Lake. There is significant dispersed development along the lower reaches of the Little Deschutes River between the communities of Sunriver and La Pine -an area characterized by gentle topography and depressions with forested wetlands, marshes and shallow lakes. Streams in this area, as illustrated by the Little Deschutes River , are low gradient and originate in the high elevation areas in the southwest portion of the watershed where there is higher precipitation. This ownership pattern has significant implications for natural resource management, as lower gradient floodplain areas tend to provide important wetland, fish, and wildlife habitat. Key Findings Fuel Loading: Having homes safe from wildfires is a concern for many residents. Fire suppression has increased the amount of dry wood in the area, creating a ready source for major wildfires. Riparian Areas and Wetlands: Loss of wetland and riparian areas , especially in the lower areas along the Little Deschutes River , has affected a number of resources. Water quality has been affected by the reduced wetlands that act as filters of nitrogen; the loss of streamside trees and other vegetation reduces shade that helps to cool water temperatures. Finally, loss ofwetlands and riparian vegetation has reduced important fish and wildlife habitats. Wildlife: The growth and development have altered wildlife habitats. Loss of wetlands, streamside vegetation, and other changes in the watershed have reduced important wildlife habitat. Roads and development have impacted migrating mule deer, increasing collisions between deer and cars and altering their migration pathways. Fish: There has been a significant loss of native trout and an increase in introduced brook and brown trout in the Little Deschutes River and tributaries. Loss of native trout is from competition with introduced species and changes in aquatic habitat and water temperatures. Water Quality: A major concern about the water in the river is unusually high temperatures in the summer and the abnormal growth of algae. Other studies indicated that there are problems with groundwater loading ofnitrogen. The high water table (with associated wetlands), and porous pumice soils contributes to increased nitrates, a by-product of septic systems and an indicator of human pathogens. Close

• 2. [Article] AI - Rearing of Juvenile Salmon in Recovering Wetlands of the Salmon River Estuary

  Abstract -- The Salmon River estuary, on the central Oregon coast, provides an excellent opportunity to study salmonid use of restored tidal marsh. The U.S. Forest Service manages the estuary as part of ...

  Citation × Citation Citation Abstract Copy Title: AI - Rearing of Juvenile Salmon in Recovering Wetlands of the Salmon River Estuary Abstract -- The Salmon River estuary, on the central Oregon coast, provides an excellent opportunity to study salmonid use of restored tidal marsh. The U.S. Forest Service manages the estuary as part of the Cascade Head Scenic Research Area with the goal to rehabilitate the estuary “to its condition prior to the existing diking and agricultural use.” To achieve this goal, the U.S. Forest Service has completed three dike removal projects at 9-year intervals beginning in 1978. These projects created a patchwork of restored marshes in various stages of recovery, providing a natural laboratory for studying marsh restoration processes and their effects on estuarine rearing salmonids. Our Sea Grant-funded research, which is a cooperative study with researchers from the University of Washington, has four objectives: (1) describe salmon species use of undiked reference and recovering marshes; (2) compare diets of juvenile salmon among reference and diked marshes of different recovery ages; (3) compare availability and distribution of prey organisms consumed by juvenile salmon; and (4) assess geomorphological and ecological indicators (“metrics”) of restored wetlands and relationships to salmon use. This report describes the results of fish distribution and abundance surveys. Results of the other objectives are described in Gray et al. (In Review). Title: AI - Rearing of Juvenile Salmon in Recovering Wetlands of the Salmon River Estuary Abstract -- The Salmon River estuary, on the central Oregon coast, provides an excellent opportunity to study salmonid use of restored tidal marsh. The U.S. Forest Service manages the estuary as part of the Cascade Head Scenic Research Area with the goal to rehabilitate the estuary “to its condition prior to the existing diking and agricultural use.” To achieve this goal, the U.S. Forest Service has completed three dike removal projects at 9-year intervals beginning in 1978. These projects created a patchwork of restored marshes in various stages of recovery, providing a natural laboratory for studying marsh restoration processes and their effects on estuarine rearing salmonids. Our Sea Grant-funded research, which is a cooperative study with researchers from the University of Washington, has four objectives: (1) describe salmon species use of undiked reference and recovering marshes; (2) compare diets of juvenile salmon among reference and diked marshes of different recovery ages; (3) compare availability and distribution of prey organisms consumed by juvenile salmon; and (4) assess geomorphological and ecological indicators (“metrics”) of restored wetlands and relationships to salmon use. This report describes the results of fish distribution and abundance surveys. Results of the other objectives are described in Gray et al. (In Review). Close

• 3. [Article] AI - Stream Habitat Conditions on Industrial Forest Lands in Coastal Oregon

  Abstract -- In the summer of 1998 and 1999, watersheds in western Oregon were randomly sampled for stream habitat conditions. Sites were selected using a random tessellation stratified design. Oregon Department ...

  Citation × Citation Citation Abstract Copy Title: AI - Stream Habitat Conditions on Industrial Forest Lands in Coastal Oregon Abstract -- In the summer of 1998 and 1999, watersheds in western Oregon were randomly sampled for stream habitat conditions. Sites were selected using a random tessellation stratified design. Oregon Department of Fish and Wildlife Aquatic Inventories methods were used to quantify indicators of sediment supply and quality, riparian forest connectivity and health, habitat structure, in-stream complexity, and presence of salmonid species. As part of the overall sampling 47 sites in 1998 and 70 sites in 1999 were sampled on industrial forest lands. Of these sites 13 were sampled both in 1998 and 1999, and 37 sites were sampled for fish presence/absence. Approximately 44% of the sites sampled for habitat were within the range of anadromous salmonids. Upstream catchment area and gradient were the two major factors driving the overall patterns of habitat variables. Secondarily, land ownership and geology were other factors correlated with the habitat variables analyzed. The private non-industrial land ownership type was characterized by slightly higher fine sediment levels, lower wood volumes and number of key wood pieces, lower densities of deep pools, and lower levels of stream shading. State and industrial forest lands show moderate wood levels in the stream channel, although they show low levels of conifers in riparian zones. The sedimentary geologic type was characterized by higher levels of fine sediments in riffle units. Twelve, high quality, unconstrained stream reaches occurred in the 1998 and 1999 habitat sample on Industrial forest lands. Conditions on industrial forest lands in 1998-1999 were compared to conditions in 1993-1994 to detect any potential change over the five-year period. Three different datasets were analyzed. No significant changes in aquatic habitat or riparian conditions were detected. Electrofishing surveys were conducted at 37 sites outside or the expected range of coho salmon to determine fish presence/absence. Salmonid species were present at 19 of the sites that were electrofished. Title: AI - Stream Habitat Conditions on Industrial Forest Lands in Coastal Oregon Abstract -- In the summer of 1998 and 1999, watersheds in western Oregon were randomly sampled for stream habitat conditions. Sites were selected using a random tessellation stratified design. Oregon Department of Fish and Wildlife Aquatic Inventories methods were used to quantify indicators of sediment supply and quality, riparian forest connectivity and health, habitat structure, in-stream complexity, and presence of salmonid species. As part of the overall sampling 47 sites in 1998 and 70 sites in 1999 were sampled on industrial forest lands. Of these sites 13 were sampled both in 1998 and 1999, and 37 sites were sampled for fish presence/absence. Approximately 44% of the sites sampled for habitat were within the range of anadromous salmonids. Upstream catchment area and gradient were the two major factors driving the overall patterns of habitat variables. Secondarily, land ownership and geology were other factors correlated with the habitat variables analyzed. The private non-industrial land ownership type was characterized by slightly higher fine sediment levels, lower wood volumes and number of key wood pieces, lower densities of deep pools, and lower levels of stream shading. State and industrial forest lands show moderate wood levels in the stream channel, although they show low levels of conifers in riparian zones. The sedimentary geologic type was characterized by higher levels of fine sediments in riffle units. Twelve, high quality, unconstrained stream reaches occurred in the 1998 and 1999 habitat sample on Industrial forest lands. Conditions on industrial forest lands in 1998-1999 were compared to conditions in 1993-1994 to detect any potential change over the five-year period. Three different datasets were analyzed. No significant changes in aquatic habitat or riparian conditions were detected. Electrofishing surveys were conducted at 37 sites outside or the expected range of coho salmon to determine fish presence/absence. Salmonid species were present at 19 of the sites that were electrofished. Close

• 4. [Article] Neacoxie Watershed

  Abstract -- Previously, little information was known about the ecology or the condition of native habitats in the Neacoxie sub-watershed that drains from the city of Warrenton into the north section of ...

  Citation × Citation Citation Abstract Copy Title: Neacoxie Watershed Abstract -- Previously, little information was known about the ecology or the condition of native habitats in the Neacoxie sub-watershed that drains from the city of Warrenton into the north section of the Necanicum Estuary in the city of Seaside. In 2002, the Necanicum Watershed Council completed an assessment for the Necanicum River watershed, but with major knowledge gaps for the Neacoxie watershed, which includes the Neacoxie Creek corridor and the Clatsop Plains. In order for the North Coast Land Conservancy (NCLC) and other land managers to develop stewardship priorities and to make informed decisions about land management actions in this region, additional information was required. Together with the Necanicum Watershed Council and the North Coast Watershed Association, NCLC secured funding to conduct habitat inventories of the Neacoxie watershed. The Neacoxie Watershed Assessment summarizes the results of terrestrial plant transects and aquatic plant surveys completed in the summer of 2011 on ten properties owned by the North Coast Land Conservancy (NCLC) in the Neacoxie Creek watershed (please refer to Appendices A & B). Habitat types include stabilized sand dunes dominated by coastal prairie habitat, interdunal wetland swales and lakes, upland Sitka spruce forest, and forested wetlands. Percent composition of each plant community type observed was calculated. Invasive non-native plant species were recorded. Surveys were also conducted for both native and non-native plants in four water bodies owned by NCLC or adjacent to land trust properties. The plant community data that were collected will be used to evaluate baseline ecological conditions in the Neacoxie watershed. Plant communities can be used as indicators of long-term tidal and hydrologic conditions as well as the ecological health of the landscape. Repeated measurements can be used to assess community changes over time and to assess how plant community composition compares to that described for natural conditions. This information will assist the land trust in making science-based stewardship decisions on its properties, and can be used by other landowners to better understand changes occurring in plant communities in similar habitats on their properties as a result of human disturbance (e.g., land development, farming, grazing) and invasion by non-native plants. Title: Neacoxie Watershed Abstract -- Previously, little information was known about the ecology or the condition of native habitats in the Neacoxie sub-watershed that drains from the city of Warrenton into the north section of the Necanicum Estuary in the city of Seaside. In 2002, the Necanicum Watershed Council completed an assessment for the Necanicum River watershed, but with major knowledge gaps for the Neacoxie watershed, which includes the Neacoxie Creek corridor and the Clatsop Plains. In order for the North Coast Land Conservancy (NCLC) and other land managers to develop stewardship priorities and to make informed decisions about land management actions in this region, additional information was required. Together with the Necanicum Watershed Council and the North Coast Watershed Association, NCLC secured funding to conduct habitat inventories of the Neacoxie watershed. The Neacoxie Watershed Assessment summarizes the results of terrestrial plant transects and aquatic plant surveys completed in the summer of 2011 on ten properties owned by the North Coast Land Conservancy (NCLC) in the Neacoxie Creek watershed (please refer to Appendices A & B). Habitat types include stabilized sand dunes dominated by coastal prairie habitat, interdunal wetland swales and lakes, upland Sitka spruce forest, and forested wetlands. Percent composition of each plant community type observed was calculated. Invasive non-native plant species were recorded. Surveys were also conducted for both native and non-native plants in four water bodies owned by NCLC or adjacent to land trust properties. The plant community data that were collected will be used to evaluate baseline ecological conditions in the Neacoxie watershed. Plant communities can be used as indicators of long-term tidal and hydrologic conditions as well as the ecological health of the landscape. Repeated measurements can be used to assess community changes over time and to assess how plant community composition compares to that described for natural conditions. This information will assist the land trust in making science-based stewardship decisions on its properties, and can be used by other landowners to better understand changes occurring in plant communities in similar habitats on their properties as a result of human disturbance (e.g., land development, farming, grazing) and invasion by non-native plants. Close

• 5. [Article] NF - Effect of Bull Trout and Brook Trout Interactions on Foraging Habitat, Feeding Behavior, and Growth

  Abstract -- Observations of free-ranging sympatric bull trout Salvelinus confluentus and nonnative brook trout S. fontinalis in two eastern Oregon headwater streams provided little evidence of habitat ...

  Citation × Citation Citation Abstract Copy Title: NF - Effect of Bull Trout and Brook Trout Interactions on Foraging Habitat, Feeding Behavior, and Growth Abstract -- Observations of free-ranging sympatric bull trout Salvelinus confluentus and nonnative brook trout S. fontinalis in two eastern Oregon headwater streams provided little evidence of habitat partitioning. Both species held focal feeding points in similar microhabitats and fed primarily from the water column rather than from the surface or benthos. In an instream experiment, 20 enclosures were assigned one of three treatments: two bull trout, four bull trout, or a mix of two bull trout and two brook trout. In the enclosures, macroinvertebrate drift was restricted and trout densities were elevated, creating an environment of reduced food and habitat resources. Under these conditions, there was no indication of a niche shift by bull trout; feeding behavior and habitat use by bull trout did not differ depending on the presence or absence of brook trout. Brook trout in the mixed-species treatment were the most aggressive, maintained dominance in 75% of the enclosures, and exhibited significantly higher growth than sympatric bull trout. However, the effects of intra-and interspecific interactions on bull trout growth were equivalent. Given the absence of resource partitioning and a niche shift by bull trout in the presence of brook trout (despite obvious interference interactions), we suggest that the displacement of bull trout by brook trout is likely when resources are scarce. Title: NF - Effect of Bull Trout and Brook Trout Interactions on Foraging Habitat, Feeding Behavior, and Growth Abstract -- Observations of free-ranging sympatric bull trout Salvelinus confluentus and nonnative brook trout S. fontinalis in two eastern Oregon headwater streams provided little evidence of habitat partitioning. Both species held focal feeding points in similar microhabitats and fed primarily from the water column rather than from the surface or benthos. In an instream experiment, 20 enclosures were assigned one of three treatments: two bull trout, four bull trout, or a mix of two bull trout and two brook trout. In the enclosures, macroinvertebrate drift was restricted and trout densities were elevated, creating an environment of reduced food and habitat resources. Under these conditions, there was no indication of a niche shift by bull trout; feeding behavior and habitat use by bull trout did not differ depending on the presence or absence of brook trout. Brook trout in the mixed-species treatment were the most aggressive, maintained dominance in 75% of the enclosures, and exhibited significantly higher growth than sympatric bull trout. However, the effects of intra-and interspecific interactions on bull trout growth were equivalent. Given the absence of resource partitioning and a niche shift by bull trout in the presence of brook trout (despite obvious interference interactions), we suggest that the displacement of bull trout by brook trout is likely when resources are scarce. Close

• 6. [Article] Oregon South Coast Estuaries: Hunter Creek, Pistol River, Chetco River, & Winchuck River Tidal Wetlands Assessment (2012-2015)

  Abstract -- Although tidal wetlands on the Oregon South Coast are limited in extent, they may be particularly valuable for a variety of wetland functions. This assessment combines the Brophy (2007) and ...

  Citation × Citation Citation Abstract Copy Title: Oregon South Coast Estuaries: Hunter Creek, Pistol River, Chetco River, & Winchuck River Tidal Wetlands Assessment (2012-2015) Abstract -- Although tidal wetlands on the Oregon South Coast are limited in extent, they may be particularly valuable for a variety of wetland functions. This assessment combines the Brophy (2007) and Adamus (2005) approaches to quantify the extent and causes of habitat loss and hydrogeomorphic changes in tidal wetlands of four Oregon South Coast Estuaries. The potential for restoring critical habitat and wetland functions is ranked using Ecological Prioritization Criteria (Brophy, 2007), while indicators of function, risk, and integrity are evaluated using scoring models from the Adamus (2005) Hydrogeomorphic (HGM) Rapid Assessment Method. The extent of inundation (head of tide) during King Tide conditions was observed and documented by staff and volunteers. Field measurements of salinity concentrations and stratification during high and low flow were tabulated. The historic aerial photo record was examined to detect channel migration, floodplain re-vegetation, and human-caused alterations. Related studies were combined with these observations to provide a summary of estuary hydrology, sedimentation, and channel stability related to wetland establishment and loss in each of the four estuaries. Ecological priority scores (Brophy, 2007) varied with wetland size, tidal channel condition, connectivity, and diversity of vegetation classes. Wetlands were categorized as restoration or conservation types, and priority ranks for wetlands were depicted on orthophoto base maps. Tidal wetlands and nearby floodplain wetlands in a variety of geomorphic settings were surveyed using the HGM protocol, including one “reference” and one restoration site . The HGM survey scores 55 indicators, including botanical transects, used to rank wetland functions (calculated by indicator scoring models). Risks to wetlands include human disturbances in close proximity to the wetlands and floodplains, resulting from the narrow valley floors in this tectonically active region. Wetland integrity is threatened by a surprising large proportion of non-native species in the botanical transects, 40%. Wetland indicators that scored low, and could be restored or enhanced, are discussed in a restoration considerations narrative. Wetland descriptions include lists of plant species, grouped by wetland status, native/non-native, and perennial/annual persistence. In addition to the HGM scores, an analysis of cover and diversity of all plant species in plots, off-transect species diversity, and waterfowl food distribution was completed using a wetland vegetation database developed for the Oregon South Coast. Title: Oregon South Coast Estuaries: Hunter Creek, Pistol River, Chetco River, & Winchuck River Tidal Wetlands Assessment (2012-2015) Abstract -- Although tidal wetlands on the Oregon South Coast are limited in extent, they may be particularly valuable for a variety of wetland functions. This assessment combines the Brophy (2007) and Adamus (2005) approaches to quantify the extent and causes of habitat loss and hydrogeomorphic changes in tidal wetlands of four Oregon South Coast Estuaries. The potential for restoring critical habitat and wetland functions is ranked using Ecological Prioritization Criteria (Brophy, 2007), while indicators of function, risk, and integrity are evaluated using scoring models from the Adamus (2005) Hydrogeomorphic (HGM) Rapid Assessment Method. The extent of inundation (head of tide) during King Tide conditions was observed and documented by staff and volunteers. Field measurements of salinity concentrations and stratification during high and low flow were tabulated. The historic aerial photo record was examined to detect channel migration, floodplain re-vegetation, and human-caused alterations. Related studies were combined with these observations to provide a summary of estuary hydrology, sedimentation, and channel stability related to wetland establishment and loss in each of the four estuaries. Ecological priority scores (Brophy, 2007) varied with wetland size, tidal channel condition, connectivity, and diversity of vegetation classes. Wetlands were categorized as restoration or conservation types, and priority ranks for wetlands were depicted on orthophoto base maps. Tidal wetlands and nearby floodplain wetlands in a variety of geomorphic settings were surveyed using the HGM protocol, including one “reference” and one restoration site . The HGM survey scores 55 indicators, including botanical transects, used to rank wetland functions (calculated by indicator scoring models). Risks to wetlands include human disturbances in close proximity to the wetlands and floodplains, resulting from the narrow valley floors in this tectonically active region. Wetland integrity is threatened by a surprising large proportion of non-native species in the botanical transects, 40%. Wetland indicators that scored low, and could be restored or enhanced, are discussed in a restoration considerations narrative. Wetland descriptions include lists of plant species, grouped by wetland status, native/non-native, and perennial/annual persistence. In addition to the HGM scores, an analysis of cover and diversity of all plant species in plots, off-transect species diversity, and waterfowl food distribution was completed using a wetland vegetation database developed for the Oregon South Coast. Close

• 7. [Article] Stream-Associated Amphibian Habitat Assessment in the Portland-Vancouver Metropolitan Region

  This study assessed the influence of landscape development on stream-associated amphibians in forested riparian areas within the Portland-Vancouver metropolitan region. Human alteration of landscapes may ...

  Citation × Citation Citation Abstract Copy Title: Stream-Associated Amphibian Habitat Assessment in the Portland-Vancouver Metropolitan Region Author: Dietrich, Andrew Evans Year: 2012 This study assessed the influence of landscape development on stream-associated amphibians in forested riparian areas within the Portland-Vancouver metropolitan region. Human alteration of landscapes may dramatically affect the ecology of neighboring aquatic systems. It was hypothesized that lotic amphibians would be negatively associated with greater amounts of landscape development and positively associated with forested area within the surrounding watershed. Thirty-seven 1st-3rd order streams were sampled between June 21st and September 21st in 2011. Streams potentially providing adequate habitat for stream-obligate amphibians were randomly selected. Amphibians were surveyed along 30-meter stream transects using an active-cover search (ACS). Environmental variables associated with development in surrounding landscapes were measured in situ. GIS delineation was conducted to define landscape-scale variables at stratified distances from riparian networks up-stream of each site via the utilization of the 2006 NLCD dataset and a finer-scale, regional dataset compiled by the Institute for Natural Resources (INR). Amphibians were detected at seventeen of the thirty-seven sampled streams. The most commonly detected species were Dicamptadon tenebrosus, Plethadon vehiculum and Plethadon dunni. Streams where amphibians were observed had lower average water temperature and conductivity, coarser stream substrate and were located on public property more often than streams where no amphibians were detected. Landscape variables were most significant to amphibians within 100 and 200 meters of the upstream stream network. Occupancy of a site by facultative species was best explained by the proportion of mixed forest in the surrounding watershed (R2=0.343, p<0.001). Occupancy of a stream by obligate species was best predicted by measurements of water quality and in-stream cover (Water Temperature: R2=0.275, p<0.001; Water Conductivity: R2=0.248, p<0.001; Cover: R2=0.323, p<0.001). Occupancy of stream refugia by all observed amphibians was positively influenced by higher percentages of forest cover and lower percentages of urban development and herbaceous vegetation in the surrounding watershed. Results of this study indicate that urban refugia must contain adequate riparian forest area, coarse stream substrate and clean, cool water to sustain stream-amphibian communities. Protection of remnant forested headwater stream networks is essential to the conservation of lotic amphibians in this urbanized region. Title: Stream-Associated Amphibian Habitat Assessment in the Portland-Vancouver Metropolitan Region Author: Dietrich, Andrew Evans Year: 2012 This study assessed the influence of landscape development on stream-associated amphibians in forested riparian areas within the Portland-Vancouver metropolitan region. Human alteration of landscapes may dramatically affect the ecology of neighboring aquatic systems. It was hypothesized that lotic amphibians would be negatively associated with greater amounts of landscape development and positively associated with forested area within the surrounding watershed. Thirty-seven 1st-3rd order streams were sampled between June 21st and September 21st in 2011. Streams potentially providing adequate habitat for stream-obligate amphibians were randomly selected. Amphibians were surveyed along 30-meter stream transects using an active-cover search (ACS). Environmental variables associated with development in surrounding landscapes were measured in situ. GIS delineation was conducted to define landscape-scale variables at stratified distances from riparian networks up-stream of each site via the utilization of the 2006 NLCD dataset and a finer-scale, regional dataset compiled by the Institute for Natural Resources (INR). Amphibians were detected at seventeen of the thirty-seven sampled streams. The most commonly detected species were Dicamptadon tenebrosus, Plethadon vehiculum and Plethadon dunni. Streams where amphibians were observed had lower average water temperature and conductivity, coarser stream substrate and were located on public property more often than streams where no amphibians were detected. Landscape variables were most significant to amphibians within 100 and 200 meters of the upstream stream network. Occupancy of a site by facultative species was best explained by the proportion of mixed forest in the surrounding watershed (R2=0.343, p<0.001). Occupancy of a stream by obligate species was best predicted by measurements of water quality and in-stream cover (Water Temperature: R2=0.275, p<0.001; Water Conductivity: R2=0.248, p<0.001; Cover: R2=0.323, p<0.001). Occupancy of stream refugia by all observed amphibians was positively influenced by higher percentages of forest cover and lower percentages of urban development and herbaceous vegetation in the surrounding watershed. Results of this study indicate that urban refugia must contain adequate riparian forest area, coarse stream substrate and clean, cool water to sustain stream-amphibian communities. Protection of remnant forested headwater stream networks is essential to the conservation of lotic amphibians in this urbanized region. Close

• 8. [Article] Evaluating the Effects of Road Crossing Structures on Stream-Associated Amphibians in the Wilson River Watershed, Tillamook State Forest, Oregon

  As replacement and removal of undersized culverts gains momentum as an effective technique for restoring natural stream flows and removing fish passage barriers, it is important to evaluate the benefits ...

  Citation × Citation Citation Abstract Copy Title: Evaluating the Effects of Road Crossing Structures on Stream-Associated Amphibians in the Wilson River Watershed, Tillamook State Forest, Oregon Author: Twitchell, Sara Erin Year: 2013 As replacement and removal of undersized culverts gains momentum as an effective technique for restoring natural stream flows and removing fish passage barriers, it is important to evaluate the benefits of these efforts on the in-stream and adjacent riparian habitat for other species of potential concern. This study compares stream-associated amphibian (SAA) occurrence in streams adjacent to different road crossing structures on unpaved forest roads in the Wilson River watershed located within the Tillamook State Forest, Oregon. Surveys were conducted at road crossing structures for three taxa of SAA; Pacific giant salamander (Dicamptodon tenebrosus), coastal tailed frog (Ascaphus truei), and Columbia torrent salamander (Rhyacotriton kezeri). Statistical models were created to analyze the effect of habitat variables on SAA occupancy, and determine whether those variables changed relative to road crossing structures. Results showed that coastal tailed frog occupancy was positively associated with dissolved oxygen and crayfish presence, negatively associated with longitude, and had a slight quadratic relationship to channel confinement. Because all sites were highly saturated with oxygen, percent dissolved oxygen was likely a surrogate for one or more other covariates, such as in-stream habitat or substrate size. Detection rates of Pacific giant salamander were too high and detection rates of Columbia torrent salamander were too low to provide reliable models, but they did provide some insight into the factors affecting occupancy in the study area, including information about their interactions with road crossing structures. Occupancy rates of Pacific giant salamanders in the study area appear to be unaffected by road crossings, fish passable or otherwise. Conversely, torrent salamanders seemed to be mostly absent from the study sites altogether, but based on the one stream where they were detected, they are not excluded from occupying fish barrier culvert sites. Top weighted habitat covariates, including dissolved oxygen, channel confinement, crayfish and fish presence, and flow constriction are all indicators of disturbance that can be linked to road crossings. Although the size and structure of road crossings did not prove to significantly influence SAA occupancy, indicators of stream disturbance that can be related to road crossings were included in the best models for predicting occupancy, demonstrating the importance of reducing disturbance related to road crossings on streams. Title: Evaluating the Effects of Road Crossing Structures on Stream-Associated Amphibians in the Wilson River Watershed, Tillamook State Forest, Oregon Author: Twitchell, Sara Erin Year: 2013 As replacement and removal of undersized culverts gains momentum as an effective technique for restoring natural stream flows and removing fish passage barriers, it is important to evaluate the benefits of these efforts on the in-stream and adjacent riparian habitat for other species of potential concern. This study compares stream-associated amphibian (SAA) occurrence in streams adjacent to different road crossing structures on unpaved forest roads in the Wilson River watershed located within the Tillamook State Forest, Oregon. Surveys were conducted at road crossing structures for three taxa of SAA; Pacific giant salamander (Dicamptodon tenebrosus), coastal tailed frog (Ascaphus truei), and Columbia torrent salamander (Rhyacotriton kezeri). Statistical models were created to analyze the effect of habitat variables on SAA occupancy, and determine whether those variables changed relative to road crossing structures. Results showed that coastal tailed frog occupancy was positively associated with dissolved oxygen and crayfish presence, negatively associated with longitude, and had a slight quadratic relationship to channel confinement. Because all sites were highly saturated with oxygen, percent dissolved oxygen was likely a surrogate for one or more other covariates, such as in-stream habitat or substrate size. Detection rates of Pacific giant salamander were too high and detection rates of Columbia torrent salamander were too low to provide reliable models, but they did provide some insight into the factors affecting occupancy in the study area, including information about their interactions with road crossing structures. Occupancy rates of Pacific giant salamanders in the study area appear to be unaffected by road crossings, fish passable or otherwise. Conversely, torrent salamanders seemed to be mostly absent from the study sites altogether, but based on the one stream where they were detected, they are not excluded from occupying fish barrier culvert sites. Top weighted habitat covariates, including dissolved oxygen, channel confinement, crayfish and fish presence, and flow constriction are all indicators of disturbance that can be linked to road crossings. Although the size and structure of road crossings did not prove to significantly influence SAA occupancy, indicators of stream disturbance that can be related to road crossings were included in the best models for predicting occupancy, demonstrating the importance of reducing disturbance related to road crossings on streams. Close

• 9. [Article] Biostratigraphy of the Type Yamhill Formation, Polk County, Oregon

  One hundred and seventy-four species and varieties of fossil Foraminifera are recorded from thirty-eight localities in the Siletz River Volcanics, Yamhill and Nestucca Formations exposed along Mill and ...

  Citation × Citation Citation Abstract Copy Title: Biostratigraphy of the Type Yamhill Formation, Polk County, Oregon Author: Gaston, Larry R. Year: 1974 One hundred and seventy-four species and varieties of fossil Foraminifera are recorded from thirty-eight localities in the Siletz River Volcanics, Yamhill and Nestucca Formations exposed along Mill and Gooseneck Creeks, in the Northern Coast Range of Oregon. Marginulina holmesi is described as new. The Foraminifera indicate that this sequence was deposited during late Ulatisian and Narizian time, in marine waters at bathyal or lower neritic depths, with cool surface temperatures. The Yamhill Formation can be correlated with Moody Shale member of the Toledo Formation and the Coaledo Formation of Oregon; the McIntosh and Aldwell Formations of Washington; and the upper part of the Canoas siltstone member of the Kreyenhagen Formation and the Alhambra Formation of California. It is proposed to modify, in part, the type section of the Yamhill Formation. Approximately 2.2 miles of the section, south of the Yamhill River Fault, are excluded from the original type area. Biostratigraphic studies of foraminiferal faunae from adjacent sides of the Yamhill River Fault suggest only minor vertical displacement. Title: Biostratigraphy of the Type Yamhill Formation, Polk County, Oregon Author: Gaston, Larry R. Year: 1974 One hundred and seventy-four species and varieties of fossil Foraminifera are recorded from thirty-eight localities in the Siletz River Volcanics, Yamhill and Nestucca Formations exposed along Mill and Gooseneck Creeks, in the Northern Coast Range of Oregon. Marginulina holmesi is described as new. The Foraminifera indicate that this sequence was deposited during late Ulatisian and Narizian time, in marine waters at bathyal or lower neritic depths, with cool surface temperatures. The Yamhill Formation can be correlated with Moody Shale member of the Toledo Formation and the Coaledo Formation of Oregon; the McIntosh and Aldwell Formations of Washington; and the upper part of the Canoas siltstone member of the Kreyenhagen Formation and the Alhambra Formation of California. It is proposed to modify, in part, the type section of the Yamhill Formation. Approximately 2.2 miles of the section, south of the Yamhill River Fault, are excluded from the original type area. Biostratigraphic studies of foraminiferal faunae from adjacent sides of the Yamhill River Fault suggest only minor vertical displacement. Close

• 10. [Article] Post-occupancy Evaluation at the Zoo: Behavioral and Hormonal Indicators of Welfare in Orangutans (Pongo pygmaeus abelii)

  An increased understanding of species-specific behavioral needs has lead zoos to focus on providing more naturalistic and stimulating environments. Scientific assessments of how changes in habitat affect ...

  Citation × Citation Citation Abstract Copy Title: Post-occupancy Evaluation at the Zoo: Behavioral and Hormonal Indicators of Welfare in Orangutans (Pongo pygmaeus abelii) Author: Tingey, Leigha Year: 2012 An increased understanding of species-specific behavioral needs has lead zoos to focus on providing more naturalistic and stimulating environments. Scientific assessments of how changes in habitat affect animal behavior are necessary in improving overall animal welfare. This study examined the move of three orangutans housed at the Oregon Zoo into a new and innovative exhibit. Post-occupancy evaluation (POE), which offers systematic information regarding the success or failure of the built environment (Maple & Finlay, 1987), was utilized to effectively evaluate the results of the move. The collection of behavioral data and adrenal activity monitoring through collection of non-invasive saliva, urine and hair provided a comprehensive methodology for comparing changes in behavior and physiological functioning. Behavioral results showed that following the move to the new enclosure animals spent less time inactive, more time at higher elevations and utilized exhibit structures at a greater frequency. Hormonal results suggest that detection of cortisol in orangutan hair could be a useful tool for monitoring chronic stress. Title: Post-occupancy Evaluation at the Zoo: Behavioral and Hormonal Indicators of Welfare in Orangutans (Pongo pygmaeus abelii) Author: Tingey, Leigha Year: 2012 An increased understanding of species-specific behavioral needs has lead zoos to focus on providing more naturalistic and stimulating environments. Scientific assessments of how changes in habitat affect animal behavior are necessary in improving overall animal welfare. This study examined the move of three orangutans housed at the Oregon Zoo into a new and innovative exhibit. Post-occupancy evaluation (POE), which offers systematic information regarding the success or failure of the built environment (Maple & Finlay, 1987), was utilized to effectively evaluate the results of the move. The collection of behavioral data and adrenal activity monitoring through collection of non-invasive saliva, urine and hair provided a comprehensive methodology for comparing changes in behavior and physiological functioning. Behavioral results showed that following the move to the new enclosure animals spent less time inactive, more time at higher elevations and utilized exhibit structures at a greater frequency. Hormonal results suggest that detection of cortisol in orangutan hair could be a useful tool for monitoring chronic stress. Close