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• 11. [Article] Willamette Biological Opinion Hatchery Research 2007 Interim Activities Report

  Abstract -- Possible risks of artificial propagation programs have been well documented. Hazards include disease transfer, competition for food and spawning sites, increased predation, increased incidental mortality ...

  Citation × Citation Citation Abstract Copy Title: Willamette Biological Opinion Hatchery Research 2007 Interim Activities Report Abstract -- Possible risks of artificial propagation programs have been well documented. Hazards include disease transfer, competition for food and spawning sites, increased predation, increased incidental mortality from harvest, loss of genetic variability, genetic drift, and domestication (Steward and Bjornn 1990; Hard et al. 1992; Cuenco et al. 1993; Busack and Currens 1995; NRC 1996; and Waples 1999). Hatcheries can also play a positive role for wild salmonids by bolstering populations, especially those on the verge of extirpation, by providing a genetic reserve as well as providing opportunities for nutrient enrichment of streams (Steward and Bjornn 1990; Cuenco et al. 1993). The objective of this project is to evaluate the potential effects of hatchery programs on naturally spawning populations of spring Chinook within the Upper Willamette River ESU. The project employs three types of activities to achieve this goal: sampling of returns to hatcheries, monitoring of adult migration through the use video observations, and monitoring natural production through spawning ground surveys. Title: Willamette Biological Opinion Hatchery Research 2007 Interim Activities Report Abstract -- Possible risks of artificial propagation programs have been well documented. Hazards include disease transfer, competition for food and spawning sites, increased predation, increased incidental mortality from harvest, loss of genetic variability, genetic drift, and domestication (Steward and Bjornn 1990; Hard et al. 1992; Cuenco et al. 1993; Busack and Currens 1995; NRC 1996; and Waples 1999). Hatcheries can also play a positive role for wild salmonids by bolstering populations, especially those on the verge of extirpation, by providing a genetic reserve as well as providing opportunities for nutrient enrichment of streams (Steward and Bjornn 1990; Cuenco et al. 1993). The objective of this project is to evaluate the potential effects of hatchery programs on naturally spawning populations of spring Chinook within the Upper Willamette River ESU. The project employs three types of activities to achieve this goal: sampling of returns to hatcheries, monitoring of adult migration through the use video observations, and monitoring natural production through spawning ground surveys. Close

• 12. [Article] 2007 Oregon Chub Investigations Progress Reports 2007

  Abstract -- Oregon chub Oregonichthys crameri, small minnows endemic to the Willamette Valley, were federally listed as endangered under the Endangered Species Act in 1993. Factors implicated in the decline ...

  Citation × Citation Citation Abstract Copy Title: 2007 Oregon Chub Investigations Progress Reports 2007 Abstract -- Oregon chub Oregonichthys crameri, small minnows endemic to the Willamette Valley, were federally listed as endangered under the Endangered Species Act in 1993. Factors implicated in the decline of this species include changes in flow regimes and habitat characteristics resulting from the construction of flood control dams, revetments, channelization, diking, and the drainage of wetlands. The Oregon chub is further threatened by predation and competition by non-native species such as largemouth bass Micropterus salmoides, crappies Pomoxis sp., sunfishes Lepomis sp., bullheads Ameiurus sp., and western mosquitofish Gambusia affinis. We continued surveys initiated in 1991 in the Willamette River drainage to quantify the abundance of known Oregon chub populations, search for unknown populations, evaluate potential introduction sites, and monitor introduced populations as part of the implementation of the Oregon Chub Recovery Plan. We sampled a total of 70 sites in 2007. New populations of Oregon chub were discovered at Green Island in the lower McKenzie River and in the Muddy Creek drainage (Linn County). We confirmed the continued existence of Oregon chub at 34 locations. These included 23 naturally occurring and 11 introduced populations. We did not find Oregon chub at nine locations where they were collected on at least one occasion between 1991-2006. Nonnative fish were collected at most of these locations. We obtained abundance estimates of 18 naturally occurring populations and 11 introduced populations of Oregon chub located in the Middle Fork Willamette, Santiam, McKenzie, and Mid-Willamette drainages (Table 1). We introduced additional Oregon chub into the South Stayton Pond in the Santiam drainage and into Cheadle and Display Ponds in the Mid-Willamette drainage. The Oregon Chub Recovery Plan (U.S. Fish and Wildlife Service 1998) set recovery criteria for downlisting the species to “threatened” and for delisting the species. The criteria for downlisting the species are: 1) establish and manage 10 populations of at least 500 adult fish, 2) all of these populations must exhibit a stable or increasing trend for five years, and 3) at least three populations meeting criterion 1 and 2 must be located in each of the three recovery areas (Middle Fork Willamette River, Santiam River, and Mid-Willamette River tributaries). In 2007, there were 20 populations totaling 500 or more individuals (Table 1). Fifteen of these populations also met the second criteria. Of the 15 populations meeting criteria 1 and 2, eight were located in the Middle Fork Willamette drainage, four were located in the Mid-Willamette drainage, and three were located in the Santiam drainage. In 2007, we met the downlisting criteria. Findings to date indicate that Oregon chub remain at risk due to the loss of suitable habitat and the continued threats posed by the proliferation of non-native fishes, illegal water withdrawals, accelerated sedimentation, and potential chemical spills or careless pesticide applications. Their status has improved in recent years, resulting primarily from successful introductions and the discovery of previously undocumented populations. Title: 2007 Oregon Chub Investigations Progress Reports 2007 Abstract -- Oregon chub Oregonichthys crameri, small minnows endemic to the Willamette Valley, were federally listed as endangered under the Endangered Species Act in 1993. Factors implicated in the decline of this species include changes in flow regimes and habitat characteristics resulting from the construction of flood control dams, revetments, channelization, diking, and the drainage of wetlands. The Oregon chub is further threatened by predation and competition by non-native species such as largemouth bass Micropterus salmoides, crappies Pomoxis sp., sunfishes Lepomis sp., bullheads Ameiurus sp., and western mosquitofish Gambusia affinis. We continued surveys initiated in 1991 in the Willamette River drainage to quantify the abundance of known Oregon chub populations, search for unknown populations, evaluate potential introduction sites, and monitor introduced populations as part of the implementation of the Oregon Chub Recovery Plan. We sampled a total of 70 sites in 2007. New populations of Oregon chub were discovered at Green Island in the lower McKenzie River and in the Muddy Creek drainage (Linn County). We confirmed the continued existence of Oregon chub at 34 locations. These included 23 naturally occurring and 11 introduced populations. We did not find Oregon chub at nine locations where they were collected on at least one occasion between 1991-2006. Nonnative fish were collected at most of these locations. We obtained abundance estimates of 18 naturally occurring populations and 11 introduced populations of Oregon chub located in the Middle Fork Willamette, Santiam, McKenzie, and Mid-Willamette drainages (Table 1). We introduced additional Oregon chub into the South Stayton Pond in the Santiam drainage and into Cheadle and Display Ponds in the Mid-Willamette drainage. The Oregon Chub Recovery Plan (U.S. Fish and Wildlife Service 1998) set recovery criteria for downlisting the species to “threatened” and for delisting the species. The criteria for downlisting the species are: 1) establish and manage 10 populations of at least 500 adult fish, 2) all of these populations must exhibit a stable or increasing trend for five years, and 3) at least three populations meeting criterion 1 and 2 must be located in each of the three recovery areas (Middle Fork Willamette River, Santiam River, and Mid-Willamette River tributaries). In 2007, there were 20 populations totaling 500 or more individuals (Table 1). Fifteen of these populations also met the second criteria. Of the 15 populations meeting criteria 1 and 2, eight were located in the Middle Fork Willamette drainage, four were located in the Mid-Willamette drainage, and three were located in the Santiam drainage. In 2007, we met the downlisting criteria. Findings to date indicate that Oregon chub remain at risk due to the loss of suitable habitat and the continued threats posed by the proliferation of non-native fishes, illegal water withdrawals, accelerated sedimentation, and potential chemical spills or careless pesticide applications. Their status has improved in recent years, resulting primarily from successful introductions and the discovery of previously undocumented populations. Close

• 13. [Article] Spring Chinook Salmon in the Willamette and Sandy Rivers, October 2003 through September 2004

  Abstract -- The Oregon Fish and Wildlife Commission adopted the Native Fish Conservation Policy (ODFW 2003a) and the Hatchery Management Policy (ODFW 2003b) in part to reduce adverse impacts of hatchery ...

  Citation × Citation Citation Abstract Copy Title: Spring Chinook Salmon in the Willamette and Sandy Rivers, October 2003 through September 2004 Abstract -- The Oregon Fish and Wildlife Commission adopted the Native Fish Conservation Policy (ODFW 2003a) and the Hatchery Management Policy (ODFW 2003b) in part to reduce adverse impacts of hatchery programs on wild native stocks. The Native Fish Conservation Policy recognizes that naturally produced native fish are the foundation for long-term sustainability of native species and hatchery programs, and the fisheries they support. In the past, hatchery programs and fish passage issues were the focus of spring Chinook salmon management in the Willamette and Sandy basins. Limited information was collected on the genetic structure among basin populations, on abundance and distribution of natural spawning, on rearing and migrating of juvenile salmon, or on strategies for reducing risks that large hatchery programs pose for wild salmon populations. This study was implemented to gather this information. Annual reports (available for 1996-2004 for this project) summarize data and are available at the above website. Title: Spring Chinook Salmon in the Willamette and Sandy Rivers, October 2003 through September 2004 Abstract -- The Oregon Fish and Wildlife Commission adopted the Native Fish Conservation Policy (ODFW 2003a) and the Hatchery Management Policy (ODFW 2003b) in part to reduce adverse impacts of hatchery programs on wild native stocks. The Native Fish Conservation Policy recognizes that naturally produced native fish are the foundation for long-term sustainability of native species and hatchery programs, and the fisheries they support. In the past, hatchery programs and fish passage issues were the focus of spring Chinook salmon management in the Willamette and Sandy basins. Limited information was collected on the genetic structure among basin populations, on abundance and distribution of natural spawning, on rearing and migrating of juvenile salmon, or on strategies for reducing risks that large hatchery programs pose for wild salmon populations. This study was implemented to gather this information. Annual reports (available for 1996-2004 for this project) summarize data and are available at the above website. Close

• 14. [Article] Abundance, Life History, and Distribution of Bull Trout in the Hood River Basin: A Summary of Findings from 2006 to 2009 Information Reports number 2010-01

  Abstract -- Bull trout have been adversely affected by many land, water, and fisheries management activities throughout the range of the species. Degraded and fragmented habitat and negative interactions with ...

  Citation × Citation Citation Abstract Copy Title: Abundance, Life History, and Distribution of Bull Trout in the Hood River Basin: A Summary of Findings from 2006 to 2009 Information Reports number 2010-01 Abstract -- Bull trout have been adversely affected by many land, water, and fisheries management activities throughout the range of the species. Degraded and fragmented habitat and negative interactions with nonnative fishes have led to a decline in bull trout distribution and abundance, several local extirpations, and a federal listing in 1998 as a threatened species under the Endangered Species Act (USFWS 2002). Distribution and abundance of bull trout also have declined in Oregon, and most management units in the state are considered to be threatened by conservation risks (ODFW 2005). One of these at-risk management units exists in the Hood River basin (ODFW 2005). Bull trout in Hood River basin currently are thought to exist as two independent reproductive units (USFWS 2002), known as local populations (Rieman and McIntyre 1995). The Clear Branch local population was isolated from the rest of the basin by the construction of Clear Branch Dam in 1968. This dam provides limited downstream fish passage during periods of spill and no voluntary upstream passage. Bull trout in this population inhabit Laurance Lake reservoir and the tributaries Pinnacle Creek and upper Clear Branch, which flow into the reservoir. The Hood River local population is distributed in the mainstem Hood River, Middle Fork Hood River (Middle Fork), and a few Middle Fork tributaries. Fluvial migrants from Hood River basin also forage and winter in the Columbia River (Pribyl et al. 1996, Buchanan et al. 1997). Bull trout have been observed in the East and West Fork basins of the Hood River, but these sightings have been rare. Presently, there is little evidence to suggest local populations exist in these tributary basins (USFWS 2002, Reagan and Olsen 2008). The status of both local populations is extremely precarious. Threats that put the Clear Branch population at risk of extirpation include low abundance, negative interactions with illegally introduced smallmouth bass, isolation from upstream migration and immigration, and diminished spawning and rearing habitat (USFW 1998). The Hood River population also appears to be small and is affected by passage barriers, unscreened irrigation diversions, impaired water quality, and periodic debris flows during glacial outbursts (USFWS 1998). As mandated by their federally designated threatened status, recovery plans were drafted by the US Fish and Wildlife Service (USFWS) for each distinct population segment, including for Hood River bull trout in 2002. This draft plan listed four goals for recovery in this basin: 1) establish at least one more local population in addition to the two existing populations, 2) increase the estimated adult population in the basin to at least 500 individuals, 3) achieve a stable or increasing trend at the population recovery level for at least two generations (=10 years), and 4) improve habitat connectivity by addressing problems with passage and screening at diversions and seasonal water quality barriers (USFWS 2002). The recovery plan also sets out research and monitoring needs critical to the recovery of these populations. Needed are accurate adult abundance estimates; a standardized monitoring program; more life history information for each local population, including how Hood River bull trout use of the Columbia River and the effects of potential passage obstructions on movement; and more information on the threat posed to the Clear Branch population by the illegal introduction of smallmouth bass in Lake Laurance reservoir. The Oregon Department of Fish and Wildlife (ODFW), with the help of the USDA Forest Service (USFS), initiated a four-year study in 2006 seeking to address these needs by synthesizing available data and conducting further studies to improve our understanding of the abundance, life history, and potential limiting factors of bull trout in the Hood River recovery unit. This report describes our findings, summarizes previous studies in the context of new information, and recommends a standardized monitoring protocol and future research. Our specific study objectives were as follows: 1. Assess adult abundance of the Clear Branch local population and develop a monitoring protocol to track abundance trends that is statistically reliable, cost-effective, and that minimizes potential adverse effects on this small isolated population. 2. Describe the juvenile and adult life history patterns of the Clear Branch local population. 3. Assess the potential impact of smallmouth bass on bull trout in Laurance Lake reservoir. 4. Determine current distribution of bull trout reproduction and early rearing in potential bull trout streams in the Hood River basin. 5. Describe the migratory life history of Hood River bull trout and assess the potential impacts of Coe Diversion and two new falls on the Middle Fork Hood River (scoured by the November 2006 glacial outburst) on bull trout migrations. Title: Abundance, Life History, and Distribution of Bull Trout in the Hood River Basin: A Summary of Findings from 2006 to 2009 Information Reports number 2010-01 Abstract -- Bull trout have been adversely affected by many land, water, and fisheries management activities throughout the range of the species. Degraded and fragmented habitat and negative interactions with nonnative fishes have led to a decline in bull trout distribution and abundance, several local extirpations, and a federal listing in 1998 as a threatened species under the Endangered Species Act (USFWS 2002). Distribution and abundance of bull trout also have declined in Oregon, and most management units in the state are considered to be threatened by conservation risks (ODFW 2005). One of these at-risk management units exists in the Hood River basin (ODFW 2005). Bull trout in Hood River basin currently are thought to exist as two independent reproductive units (USFWS 2002), known as local populations (Rieman and McIntyre 1995). The Clear Branch local population was isolated from the rest of the basin by the construction of Clear Branch Dam in 1968. This dam provides limited downstream fish passage during periods of spill and no voluntary upstream passage. Bull trout in this population inhabit Laurance Lake reservoir and the tributaries Pinnacle Creek and upper Clear Branch, which flow into the reservoir. The Hood River local population is distributed in the mainstem Hood River, Middle Fork Hood River (Middle Fork), and a few Middle Fork tributaries. Fluvial migrants from Hood River basin also forage and winter in the Columbia River (Pribyl et al. 1996, Buchanan et al. 1997). Bull trout have been observed in the East and West Fork basins of the Hood River, but these sightings have been rare. Presently, there is little evidence to suggest local populations exist in these tributary basins (USFWS 2002, Reagan and Olsen 2008). The status of both local populations is extremely precarious. Threats that put the Clear Branch population at risk of extirpation include low abundance, negative interactions with illegally introduced smallmouth bass, isolation from upstream migration and immigration, and diminished spawning and rearing habitat (USFW 1998). The Hood River population also appears to be small and is affected by passage barriers, unscreened irrigation diversions, impaired water quality, and periodic debris flows during glacial outbursts (USFWS 1998). As mandated by their federally designated threatened status, recovery plans were drafted by the US Fish and Wildlife Service (USFWS) for each distinct population segment, including for Hood River bull trout in 2002. This draft plan listed four goals for recovery in this basin: 1) establish at least one more local population in addition to the two existing populations, 2) increase the estimated adult population in the basin to at least 500 individuals, 3) achieve a stable or increasing trend at the population recovery level for at least two generations (=10 years), and 4) improve habitat connectivity by addressing problems with passage and screening at diversions and seasonal water quality barriers (USFWS 2002). The recovery plan also sets out research and monitoring needs critical to the recovery of these populations. Needed are accurate adult abundance estimates; a standardized monitoring program; more life history information for each local population, including how Hood River bull trout use of the Columbia River and the effects of potential passage obstructions on movement; and more information on the threat posed to the Clear Branch population by the illegal introduction of smallmouth bass in Lake Laurance reservoir. The Oregon Department of Fish and Wildlife (ODFW), with the help of the USDA Forest Service (USFS), initiated a four-year study in 2006 seeking to address these needs by synthesizing available data and conducting further studies to improve our understanding of the abundance, life history, and potential limiting factors of bull trout in the Hood River recovery unit. This report describes our findings, summarizes previous studies in the context of new information, and recommends a standardized monitoring protocol and future research. Our specific study objectives were as follows: 1. Assess adult abundance of the Clear Branch local population and develop a monitoring protocol to track abundance trends that is statistically reliable, cost-effective, and that minimizes potential adverse effects on this small isolated population. 2. Describe the juvenile and adult life history patterns of the Clear Branch local population. 3. Assess the potential impact of smallmouth bass on bull trout in Laurance Lake reservoir. 4. Determine current distribution of bull trout reproduction and early rearing in potential bull trout streams in the Hood River basin. 5. Describe the migratory life history of Hood River bull trout and assess the potential impacts of Coe Diversion and two new falls on the Middle Fork Hood River (scoured by the November 2006 glacial outburst) on bull trout migrations. Close

• 15. [Article] Spawning distribution and habitat use of adult Pacific and western brook lamprey in Smith River, Oregon Information Reports 2006-1

  Abstract -- Coastal Oregon populations of Pacific lamprey Lampetra tridentata and western brook lamprey L. richardsoni are considered depressed due to habitat loss and passage problems (Close et al. 2002, ...

  Citation × Citation Citation Abstract Copy Title: Spawning distribution and habitat use of adult Pacific and western brook lamprey in Smith River, Oregon Information Reports 2006-1 Abstract -- Coastal Oregon populations of Pacific lamprey Lampetra tridentata and western brook lamprey L. richardsoni are considered depressed due to habitat loss and passage problems (Close et al. 2002, Nawa 2003, ODFW 2006). Pacific lamprey was listed as an Oregon state sensitive species in 1993 and in 1996 was protected through restriction of harvest (ODFW 2006). Western brook lamprey is not protected and has no special state status. Abundance of Pacific lamprey throughout the coast and Columbia River has declined dramatically since the1960s. Dam counts at Winchester, Bonneville, and Leaburg dams show a dramatic decrease from historical levels (Kostow 2002, Nawa 2003, ODFW 2006). In 2003, eleven environmental groups petitioned the U.S. Fish and Wildlife Service to list Pacific, western brook, and two other lamprey species as endangered in the Pacific Northwest and California (Nawa 2003). Even though the petition cited habitat losses due to reduced in-stream flows, water diversions, dredging, scour and channnelization issues, pollution and degradation of riparian communities, the U.S. Fish and Wildlife Service determined the petition did not contain adequate information to warrant a listing (Federal Register, 69 (27 December 2004) 77158-77167). The Oregon Department of Fish and Wildlife recently reviewed the status of western brook and Pacific lamprey and found populations to be ‘at risk’ of extinction (ODFW 2006) due to habitat loss, passage barriers and pollution. However data necessary to conduct a thorough and detailed assessment are lacking. Much of the data lacking are critical to the effective management and conservation of Oregon’s coastal lamprey species. The Columbia River Basin Lamprey Technical Workgroup (CRBLTW 2005) and members of Columbia River Inter-Tribal Fish Commission (CRITFC 2004) have identified and prioritized critical data gaps for Pacific lamprey, many of which also apply to western brook lamprey. Among these are 1) methods to assess distribution and abundance of all life stages and appropriate techniques for monitoring population status; 2) population structure and delineation; 3) population dynamics; 4) basic biology including interspecific and community level relationships; 5) limiting factors and threats including passage issues, and 6) habitat needs and requirements. This study addresses information needs pertaining to distribution and habitat use in addition to providing basic descriptive ecology. Our goal was to identify habitat variables associated with spawning Pacific and western brook lamprey in order to infer distribution throughout coastal Oregon. The objectives of this study were to 1) determine distribution of spawning Pacific and western brook lamprey in the Smith River basin; 2) describe redds of both species; and 3) describe associations of spawning Pacific and western brook lamprey in relation to habitat unit and reach scale habitat characteristics. Title: Spawning distribution and habitat use of adult Pacific and western brook lamprey in Smith River, Oregon Information Reports 2006-1 Abstract -- Coastal Oregon populations of Pacific lamprey Lampetra tridentata and western brook lamprey L. richardsoni are considered depressed due to habitat loss and passage problems (Close et al. 2002, Nawa 2003, ODFW 2006). Pacific lamprey was listed as an Oregon state sensitive species in 1993 and in 1996 was protected through restriction of harvest (ODFW 2006). Western brook lamprey is not protected and has no special state status. Abundance of Pacific lamprey throughout the coast and Columbia River has declined dramatically since the1960s. Dam counts at Winchester, Bonneville, and Leaburg dams show a dramatic decrease from historical levels (Kostow 2002, Nawa 2003, ODFW 2006). In 2003, eleven environmental groups petitioned the U.S. Fish and Wildlife Service to list Pacific, western brook, and two other lamprey species as endangered in the Pacific Northwest and California (Nawa 2003). Even though the petition cited habitat losses due to reduced in-stream flows, water diversions, dredging, scour and channnelization issues, pollution and degradation of riparian communities, the U.S. Fish and Wildlife Service determined the petition did not contain adequate information to warrant a listing (Federal Register, 69 (27 December 2004) 77158-77167). The Oregon Department of Fish and Wildlife recently reviewed the status of western brook and Pacific lamprey and found populations to be ‘at risk’ of extinction (ODFW 2006) due to habitat loss, passage barriers and pollution. However data necessary to conduct a thorough and detailed assessment are lacking. Much of the data lacking are critical to the effective management and conservation of Oregon’s coastal lamprey species. The Columbia River Basin Lamprey Technical Workgroup (CRBLTW 2005) and members of Columbia River Inter-Tribal Fish Commission (CRITFC 2004) have identified and prioritized critical data gaps for Pacific lamprey, many of which also apply to western brook lamprey. Among these are 1) methods to assess distribution and abundance of all life stages and appropriate techniques for monitoring population status; 2) population structure and delineation; 3) population dynamics; 4) basic biology including interspecific and community level relationships; 5) limiting factors and threats including passage issues, and 6) habitat needs and requirements. This study addresses information needs pertaining to distribution and habitat use in addition to providing basic descriptive ecology. Our goal was to identify habitat variables associated with spawning Pacific and western brook lamprey in order to infer distribution throughout coastal Oregon. The objectives of this study were to 1) determine distribution of spawning Pacific and western brook lamprey in the Smith River basin; 2) describe redds of both species; and 3) describe associations of spawning Pacific and western brook lamprey in relation to habitat unit and reach scale habitat characteristics. Close

• 16. [Article] Willamette Biological Opinion Hatchery Research 2010 Annual Report

  Abstract -- Task 1.1: Distribution, Abundance, and Proportion of Hatchery and Natural-Origin Chinook Salmon: Counts of spring Chinook redds were similar in 2010 compared to the 2002–2009 averages for the ...

  Citation × Citation Citation Abstract Copy Title: Willamette Biological Opinion Hatchery Research 2010 Annual Report Abstract -- Task 1.1: Distribution, Abundance, and Proportion of Hatchery and Natural-Origin Chinook Salmon: Counts of spring Chinook redds were similar in 2010 compared to the 2002–2009 averages for the Middle Fork Willamette, McKenzie and the North Santiam rivers and significantly higher in the South Santiam River Preliminary analyses indicate that the proportions of hatchery fish recovered as carcasses from the spawning grounds varied significantly among all four surveyed sub-basins (South Santiam > M. Fork Willamette > North Santiam > McKenzie) Task 1.2: Monitor fin-clipped & unclipped fish passing Leaburg and Upper Bennett dams. Adult fish passage at Leaburg and Upper Bennett dams was continuously monitored in 2010. We estimated that 2,696 spring Chinook (52% unclipped) passed above Leaburg Dam and 5,956 passed above upper Bennett Dam (14% unclipped). Passage at Leaburg Dam of fin-clipped fish was strongly bimodal with peaks in June (coincident with passage of the majority of unclipped fish) and September (coincident with a smaller proportion of unclipped fish). This bimodal peak suggests that hatchery fish might be removed in September to reduce the proportion of hatchery origin spawners while simultaneously reducing the impacts of handling wild fish. Task 2.1: Collection, spawn timing, and Hatchery/Wild (H/W ) composition for broodstock management. Collection, spawn timing, and H/W composition for broodstock management were successfully monitored at all facilities in 2010. Task 2.2: Determine Survival of Outplanted Fish and Abundance of Spawners. Patterns of pre-spawning mortality were similar to results in 2009 with mortality below project dams significantly higher than that above project dams. We did not detect significant differences in mortality between clipped and unclipped spring Chinook. In comparisons of pre-spawning mortality among sub-basins above project dams, pre-spawning mortality was uniformly low in the Breitenbush and N. Santiam above Detroit, S. Santiam above Foster, and in the S. Fork McKenzie. Pre-spawning mortality was uniformly higher above project dams in the N. Fork Mid. Fork Willamette, Fall Creek and the Little N. Fork Santiam. No comprehensive surveys were conducted in the Middle Fork Willamette. Task 3.1: Determine the extent of summer steelhead reproduction in the wild: We developed a formal study plan to analyze and interpret genetic results from a collection of 299 tissue samples from unclipped juvenile steelhead at Willamette Falls, five from the mainstem Willamette River, and two from the South Santiam River in 2010 in addition to a single sample from an unclipped adult steelhead at the Minto fish collection facility. Samples were preserved 7 and cataloged and then shipped to the NOAA Fisheries Manchester, Washington (WA) laboratory for analysis. Task 3.2: Evaluate release strategies for summer steelhead to increase migration and reduce impacts on wild fish. Study plans to evaluate advantages and disadvantages of volitional release strategies were completed and presented in the 2009 annual report to USACE (Cannon et al. 2010). Funding to process the tissue samples was not available in 2010, and no progress was made in executing the proposed work. Title: Willamette Biological Opinion Hatchery Research 2010 Annual Report Abstract -- Task 1.1: Distribution, Abundance, and Proportion of Hatchery and Natural-Origin Chinook Salmon: Counts of spring Chinook redds were similar in 2010 compared to the 2002–2009 averages for the Middle Fork Willamette, McKenzie and the North Santiam rivers and significantly higher in the South Santiam River Preliminary analyses indicate that the proportions of hatchery fish recovered as carcasses from the spawning grounds varied significantly among all four surveyed sub-basins (South Santiam > M. Fork Willamette > North Santiam > McKenzie) Task 1.2: Monitor fin-clipped & unclipped fish passing Leaburg and Upper Bennett dams. Adult fish passage at Leaburg and Upper Bennett dams was continuously monitored in 2010. We estimated that 2,696 spring Chinook (52% unclipped) passed above Leaburg Dam and 5,956 passed above upper Bennett Dam (14% unclipped). Passage at Leaburg Dam of fin-clipped fish was strongly bimodal with peaks in June (coincident with passage of the majority of unclipped fish) and September (coincident with a smaller proportion of unclipped fish). This bimodal peak suggests that hatchery fish might be removed in September to reduce the proportion of hatchery origin spawners while simultaneously reducing the impacts of handling wild fish. Task 2.1: Collection, spawn timing, and Hatchery/Wild (H/W ) composition for broodstock management. Collection, spawn timing, and H/W composition for broodstock management were successfully monitored at all facilities in 2010. Task 2.2: Determine Survival of Outplanted Fish and Abundance of Spawners. Patterns of pre-spawning mortality were similar to results in 2009 with mortality below project dams significantly higher than that above project dams. We did not detect significant differences in mortality between clipped and unclipped spring Chinook. In comparisons of pre-spawning mortality among sub-basins above project dams, pre-spawning mortality was uniformly low in the Breitenbush and N. Santiam above Detroit, S. Santiam above Foster, and in the S. Fork McKenzie. Pre-spawning mortality was uniformly higher above project dams in the N. Fork Mid. Fork Willamette, Fall Creek and the Little N. Fork Santiam. No comprehensive surveys were conducted in the Middle Fork Willamette. Task 3.1: Determine the extent of summer steelhead reproduction in the wild: We developed a formal study plan to analyze and interpret genetic results from a collection of 299 tissue samples from unclipped juvenile steelhead at Willamette Falls, five from the mainstem Willamette River, and two from the South Santiam River in 2010 in addition to a single sample from an unclipped adult steelhead at the Minto fish collection facility. Samples were preserved 7 and cataloged and then shipped to the NOAA Fisheries Manchester, Washington (WA) laboratory for analysis. Task 3.2: Evaluate release strategies for summer steelhead to increase migration and reduce impacts on wild fish. Study plans to evaluate advantages and disadvantages of volitional release strategies were completed and presented in the 2009 annual report to USACE (Cannon et al. 2010). Funding to process the tissue samples was not available in 2010, and no progress was made in executing the proposed work. Close

• 17. [Article] Work Completed for Compliance with the Biological Opinion for Hatchery Programs in the Willamette Basin USACE funding: 2004 Annual Report

  Abstract -- The National Marine Fisheries Service (NMFS) has listed spring chinook salmon(Oncorhynchus tshawytscha) and winter steelhead (O. mykiss) in the Upper Willamette River Evolutionarily Significant ...

  Citation × Citation Citation Abstract Copy Title: Work Completed for Compliance with the Biological Opinion for Hatchery Programs in the Willamette Basin USACE funding: 2004 Annual Report Abstract -- The National Marine Fisheries Service (NMFS) has listed spring chinook salmon(Oncorhynchus tshawytscha) and winter steelhead (O. mykiss) in the Upper Willamette River Evolutionarily Significant Unit (ESU) as threatened under the Endangered Species Act (ESA; 64 FRN 14308; 64 FRN 14517). Concomitant with this listing, any actions taken or funded by a federal agency must be evaluated to assess whether these actions are likely to jeopardize the continued existence of threatened and endangered species, or result in the destruction or impairment of critical habitat. Several fish hatcheries operate within the ESU and may impact wild populations of listed species. Although all of the artificial propagation programs that potentially affect listed salmonids in the Upper Willamette River ESUs are operated by the Oregon Department of Fish and Wildlife(ODFW), 90% of the funding for these operations comes from the U.S. Army Corps of Engineers (COE). Possible risks of artificial propagation programs have been well documented. Hazards include disease transfer, competition for food and spawning sites, increased predation,increased incidental mortality from harvest, loss of genetic variability, genetic drift, and domestication (Steward and Bjornn 1990; Hard et al. 1992; Cuenco et al. 1993; Busack and Currens 1995; NRC 1996; and Waples 1999). Hatcheries can also play a positive role for wild salmonids by bolstering populations, especially those on the verge of extirpation, providing a genetic reserve in the case of extirpation, and providing opportunities for nutrient enrichment of streams (Steward and Bjornn 1990; Cuenco et al. 1993). The objective of this project is to evaluate the potential effects of hatchery programs on naturally spawning populations of spring chinook and winter steelhead within the Upper Willamette River ESU. The project employs four types of activities to achieve this goal: sampling of returns to hatcheries, creels to assess fisheries, monitoring of adult and juvenile migration through the use of traps and video observations, and monitoring natural production through spawning ground surveys. Title: Work Completed for Compliance with the Biological Opinion for Hatchery Programs in the Willamette Basin USACE funding: 2004 Annual Report Abstract -- The National Marine Fisheries Service (NMFS) has listed spring chinook salmon(Oncorhynchus tshawytscha) and winter steelhead (O. mykiss) in the Upper Willamette River Evolutionarily Significant Unit (ESU) as threatened under the Endangered Species Act (ESA; 64 FRN 14308; 64 FRN 14517). Concomitant with this listing, any actions taken or funded by a federal agency must be evaluated to assess whether these actions are likely to jeopardize the continued existence of threatened and endangered species, or result in the destruction or impairment of critical habitat. Several fish hatcheries operate within the ESU and may impact wild populations of listed species. Although all of the artificial propagation programs that potentially affect listed salmonids in the Upper Willamette River ESUs are operated by the Oregon Department of Fish and Wildlife(ODFW), 90% of the funding for these operations comes from the U.S. Army Corps of Engineers (COE). Possible risks of artificial propagation programs have been well documented. Hazards include disease transfer, competition for food and spawning sites, increased predation,increased incidental mortality from harvest, loss of genetic variability, genetic drift, and domestication (Steward and Bjornn 1990; Hard et al. 1992; Cuenco et al. 1993; Busack and Currens 1995; NRC 1996; and Waples 1999). Hatcheries can also play a positive role for wild salmonids by bolstering populations, especially those on the verge of extirpation, providing a genetic reserve in the case of extirpation, and providing opportunities for nutrient enrichment of streams (Steward and Bjornn 1990; Cuenco et al. 1993). The objective of this project is to evaluate the potential effects of hatchery programs on naturally spawning populations of spring chinook and winter steelhead within the Upper Willamette River ESU. The project employs four types of activities to achieve this goal: sampling of returns to hatcheries, creels to assess fisheries, monitoring of adult and juvenile migration through the use of traps and video observations, and monitoring natural production through spawning ground surveys. Close

• 18. [Article] Willamette Biological Opinion Hatchery Research 2008 Interim Activities Report

  Abstract -- Possible risks of artificial propagation programs have been well documented. Hazards include disease transfer, competition for food and spawning sites, increased predation, increased incidental ...

  Citation × Citation Citation Abstract Copy Title: Willamette Biological Opinion Hatchery Research 2008 Interim Activities Report Abstract -- Possible risks of artificial propagation programs have been well documented. Hazards include disease transfer, competition for food and spawning sites, increased predation, increased incidental mortality from harvest, loss of genetic variability, genetic drift, and domestication (Steward and Bjornn 1990; Hard et al. 1992; Cuenco et al. 1993; Busack and Currens 1995; and Waples 1999). Hatcheries can also play a positive role for wild salmonids by bolstering populations, especially those on the verge of extirpation, by providing a genetic reserve as well as providing opportunities for nutrient enrichment of streams (Steward and Bjornn 1990; Cuenco et al. 1993). The objective of this project is to evaluate the potential effects of hatchery programs on naturally spawning populations of spring Chinook within the Upper Willamette River ESU. ODFW submits this report in fulfillment of Task Order NWPOD-08-FH-05 (per Task 3). This report covers activities of July 2008–May 2009 that were implemented by ODFW on behalf of the Corps to assist with meeting the requirements of the reasonable and prudent alternatives and measures prescribed in the Willamette Project Biological Opinion (BiOp) of July 2008 (NOAA 2008). Although a strategy to implement actions identified on the BiOp has not yet been completed, the Corps provided interim funding to continue certain monitoring activities and initiate long-term planning as detailed below: Task 1 (a–f). Monitor straying of hatchery fish on natural spawning grounds in the North Santiam, South Santiam, McKenzie, and Middle Fork Willamette rivers to determine the distribution, abundance and proportion of hatchery and natural-origin fish spawning by: (1) conducting spawning ground surveys downstream of projects and upstream of Detroit and Foster reservoirs; (2) conducting re-surveys to assess variability in redd counts among crews; (3) estimating pre-spawning mortality; (4) estimating the percentage of hatchery-origin spawners using otolith analysis; (5) monitoring fin-clipped and unclipped fish passing Leaburg and upper Bennett dams. Task 2 (a–c). Monitor fin-clipped and unclipped fish entering hatcheries and collection facilities (i.e., record number, origin, length, date of return); determine origin using otolith analysis; collect tissue samples for genetic analysis. Task 4. Work with Corps and/or contractors to develop coordinated monitoring plan for Corps-funded hatchery programs based on requirements in the 2008 BiOp. Title: Willamette Biological Opinion Hatchery Research 2008 Interim Activities Report Abstract -- Possible risks of artificial propagation programs have been well documented. Hazards include disease transfer, competition for food and spawning sites, increased predation, increased incidental mortality from harvest, loss of genetic variability, genetic drift, and domestication (Steward and Bjornn 1990; Hard et al. 1992; Cuenco et al. 1993; Busack and Currens 1995; and Waples 1999). Hatcheries can also play a positive role for wild salmonids by bolstering populations, especially those on the verge of extirpation, by providing a genetic reserve as well as providing opportunities for nutrient enrichment of streams (Steward and Bjornn 1990; Cuenco et al. 1993). The objective of this project is to evaluate the potential effects of hatchery programs on naturally spawning populations of spring Chinook within the Upper Willamette River ESU. ODFW submits this report in fulfillment of Task Order NWPOD-08-FH-05 (per Task 3). This report covers activities of July 2008–May 2009 that were implemented by ODFW on behalf of the Corps to assist with meeting the requirements of the reasonable and prudent alternatives and measures prescribed in the Willamette Project Biological Opinion (BiOp) of July 2008 (NOAA 2008). Although a strategy to implement actions identified on the BiOp has not yet been completed, the Corps provided interim funding to continue certain monitoring activities and initiate long-term planning as detailed below: Task 1 (a–f). Monitor straying of hatchery fish on natural spawning grounds in the North Santiam, South Santiam, McKenzie, and Middle Fork Willamette rivers to determine the distribution, abundance and proportion of hatchery and natural-origin fish spawning by: (1) conducting spawning ground surveys downstream of projects and upstream of Detroit and Foster reservoirs; (2) conducting re-surveys to assess variability in redd counts among crews; (3) estimating pre-spawning mortality; (4) estimating the percentage of hatchery-origin spawners using otolith analysis; (5) monitoring fin-clipped and unclipped fish passing Leaburg and upper Bennett dams. Task 2 (a–c). Monitor fin-clipped and unclipped fish entering hatcheries and collection facilities (i.e., record number, origin, length, date of return); determine origin using otolith analysis; collect tissue samples for genetic analysis. Task 4. Work with Corps and/or contractors to develop coordinated monitoring plan for Corps-funded hatchery programs based on requirements in the 2008 BiOp. Close

• 19. [Article] 2006 Borax Lake Chub Investigations Progress Reports 2006

  Abstract -- Borax Lake chub (Gila boraxobius) is represented by a single population that inhabits a 4.1 hectare geothermally-heated alkaline lake in Harney County, Oregon. The Borax Lake chub is a small ...

  Citation × Citation Citation Abstract Copy Title: 2006 Borax Lake Chub Investigations Progress Reports 2006 Abstract -- Borax Lake chub (Gila boraxobius) is represented by a single population that inhabits a 4.1 hectare geothermally-heated alkaline lake in Harney County, Oregon. The Borax Lake chub is a small minnow endemic to Borax Lake and adjacent wetlands in Oregon’s Alvord Basin (Williams and Bond 1980). Borax Lake is a natural lake, perched 10 meters above the desert floor on sinter deposits, which is fed almost exclusively by thermal groundwater. The Borax Lake chub was listed as endangered under the federal Endangered Species Act in 1982 (U.S. Fish and Wildlife Service 1982). Population abundance estimates obtained in 1991-1996 indicated a fluctuating population ranging from a low of 8,144 fish to a high of 34,634 fish (Salzer 1997). The basis for the Borax Lake chub’s listed status was not population size, but the security of a very limited, unique, isolated, and vulnerable habitat. Because Borax Lake is situated above salt deposits on the desert floor, alteration of the salt crust shoreline could reduce lake levels and the habitat quantity and quality available to Borax Lake chub. At the time of the listing, Borax Lake was threatened by habitat alteration caused by geothermal energy development and alteration of the lake shore crust to provide irrigation to surrounding pasture lands. The Borax Lake chub federal recovery plan, completed in 1987, advocated protection of the lake ecosystem through the acquisition of key private lands, protection of groundwater and surface waters, controls on access, and the removal of livestock grazing (U.S. Fish and Wildlife Service 1987). Numerous recovery measures implemented since listing have improved the conservation status of Borax Lake chub and protection of its habitat (Williams and Macdonald 2003). When the species was listed, critical habitat was designated on 259 hectares of land surrounding the lake, including 129 hectares of public lands and two 65- hectare parcels of private land. In 1983, the U.S. Bureau of Land Management designated the public land as an Area of Critical Environmental Concern. The Nature Conservancy began leasing the private lands in 1983 and purchased them in 1993, bringing the entire critical habitat into public or conservation ownership. The Nature Conservancy ended water diversion from the lake for irrigation and livestock grazing within the critical habitat. Passage of the Steens Mountain Cooperative Management and Protection Act of 2000 removed the public BLM lands from mineral and geothermal development within a majority of the basin. These actions, combined with detailed studies of the chub and their habitat have added substantially to our knowledge of the Borax Lake ecosystem (Scoppettone et al. 1995, Salzer 1992, Perkins et al. 1996). However, three primary threats remain. These include the threat to the fragile lake shoreline, wetlands, and soils from a recent increase in recreational use around the lake (particularly off-road vehicle usage), the threat of introduction of nonnative species, and potential negative impacts to the aquifer from geothermal groundwater withdrawal if groundwater pumping were to occur on private lands outside the protected areas (Williams and Macdonald 2003). Although an increase in abundance is not a goal in the successful recovery of this species, monitoring trends in abundance over time is an important management tool to assess species status. From 1998-2004, data describing the abundance of the Borax Lake chub population are not available. Abundance estimates were obtained from 1986- 1997 by The Nature Conservancy (Salzer 1997) (Figure 1). Abundance estimates for 1986-1990 are not comparable with those obtained in 1991-1997. Prior to 1991, estimates were obtained only from traps set around the perimeter of the lake. In 1991, estimates were obtained from traps set on a regularly spaced grid throughout the lake. A study comparing the methods suggests that prior to 1991 abundance was under estimated, perhaps by as much as 50 percent (Salzer 1992). A recent review of the conservation status of the Borax Lake chub by Williams and Macdonald (2003) cited the lack of recent and ongoing population and ecosystem monitoring as one argument against downlisting or delisting the species at this time. The chub population has experienced substantial fluctuations in abundance over the time period (1986-1997) when abundance data are available (Figure 1). At the time of the review, the most recent abundance estimates that were obtained in 1996 and 1997 were some of the lowest estimates since 1991. Borax Lake chub population abundance estimates from 1986 to 1997 and 2005 to 2006. Horizontal bars represent 95% confidence limits. In 1986-1990 (solid symbols), only the perimeter of the lake was trapped. After 1990 (open symbols) the entire lake was trapped. Estimates are not directly comparable across these time periods. There are limited data on population age structure that offer valuable insight into the productivity of Borax Lake chub. Williams and Bond (1983) examined lengthfrequency data and concluded that the population consisted primarily of age 1 fish, with few age 2 and age 3 fish present. Limited opercle bone aging of chub collected in 1992- 1993 also indicated that most Borax Lake were less than one year of age (67-79%), yet a few individuals were aged at 10+ years (Scoppettone 1995). Because Borax Lake chub are only found in one location and the population is apparently dominated by a single year-class of adults, the species has a high inherent risk of extinction. 3 The objectives of this study were to: 1) obtain a mark-recapture population estimate of Borax Lake chub, and 2) to evaluate ways to reduce handling of Borax Lake chub when monitoring population abundance both by modifying previous mark-recapture protocols and by developing snorkeling survey protocols to use as an alternative to mark-recapture estimates. In addition, we collected data regarding lake temperatures, chub size (age) structure, and the condition of the fragile lake shoreline and outflows. Title: 2006 Borax Lake Chub Investigations Progress Reports 2006 Abstract -- Borax Lake chub (Gila boraxobius) is represented by a single population that inhabits a 4.1 hectare geothermally-heated alkaline lake in Harney County, Oregon. The Borax Lake chub is a small minnow endemic to Borax Lake and adjacent wetlands in Oregon’s Alvord Basin (Williams and Bond 1980). Borax Lake is a natural lake, perched 10 meters above the desert floor on sinter deposits, which is fed almost exclusively by thermal groundwater. The Borax Lake chub was listed as endangered under the federal Endangered Species Act in 1982 (U.S. Fish and Wildlife Service 1982). Population abundance estimates obtained in 1991-1996 indicated a fluctuating population ranging from a low of 8,144 fish to a high of 34,634 fish (Salzer 1997). The basis for the Borax Lake chub’s listed status was not population size, but the security of a very limited, unique, isolated, and vulnerable habitat. Because Borax Lake is situated above salt deposits on the desert floor, alteration of the salt crust shoreline could reduce lake levels and the habitat quantity and quality available to Borax Lake chub. At the time of the listing, Borax Lake was threatened by habitat alteration caused by geothermal energy development and alteration of the lake shore crust to provide irrigation to surrounding pasture lands. The Borax Lake chub federal recovery plan, completed in 1987, advocated protection of the lake ecosystem through the acquisition of key private lands, protection of groundwater and surface waters, controls on access, and the removal of livestock grazing (U.S. Fish and Wildlife Service 1987). Numerous recovery measures implemented since listing have improved the conservation status of Borax Lake chub and protection of its habitat (Williams and Macdonald 2003). When the species was listed, critical habitat was designated on 259 hectares of land surrounding the lake, including 129 hectares of public lands and two 65- hectare parcels of private land. In 1983, the U.S. Bureau of Land Management designated the public land as an Area of Critical Environmental Concern. The Nature Conservancy began leasing the private lands in 1983 and purchased them in 1993, bringing the entire critical habitat into public or conservation ownership. The Nature Conservancy ended water diversion from the lake for irrigation and livestock grazing within the critical habitat. Passage of the Steens Mountain Cooperative Management and Protection Act of 2000 removed the public BLM lands from mineral and geothermal development within a majority of the basin. These actions, combined with detailed studies of the chub and their habitat have added substantially to our knowledge of the Borax Lake ecosystem (Scoppettone et al. 1995, Salzer 1992, Perkins et al. 1996). However, three primary threats remain. These include the threat to the fragile lake shoreline, wetlands, and soils from a recent increase in recreational use around the lake (particularly off-road vehicle usage), the threat of introduction of nonnative species, and potential negative impacts to the aquifer from geothermal groundwater withdrawal if groundwater pumping were to occur on private lands outside the protected areas (Williams and Macdonald 2003). Although an increase in abundance is not a goal in the successful recovery of this species, monitoring trends in abundance over time is an important management tool to assess species status. From 1998-2004, data describing the abundance of the Borax Lake chub population are not available. Abundance estimates were obtained from 1986- 1997 by The Nature Conservancy (Salzer 1997) (Figure 1). Abundance estimates for 1986-1990 are not comparable with those obtained in 1991-1997. Prior to 1991, estimates were obtained only from traps set around the perimeter of the lake. In 1991, estimates were obtained from traps set on a regularly spaced grid throughout the lake. A study comparing the methods suggests that prior to 1991 abundance was under estimated, perhaps by as much as 50 percent (Salzer 1992). A recent review of the conservation status of the Borax Lake chub by Williams and Macdonald (2003) cited the lack of recent and ongoing population and ecosystem monitoring as one argument against downlisting or delisting the species at this time. The chub population has experienced substantial fluctuations in abundance over the time period (1986-1997) when abundance data are available (Figure 1). At the time of the review, the most recent abundance estimates that were obtained in 1996 and 1997 were some of the lowest estimates since 1991. Borax Lake chub population abundance estimates from 1986 to 1997 and 2005 to 2006. Horizontal bars represent 95% confidence limits. In 1986-1990 (solid symbols), only the perimeter of the lake was trapped. After 1990 (open symbols) the entire lake was trapped. Estimates are not directly comparable across these time periods. There are limited data on population age structure that offer valuable insight into the productivity of Borax Lake chub. Williams and Bond (1983) examined lengthfrequency data and concluded that the population consisted primarily of age 1 fish, with few age 2 and age 3 fish present. Limited opercle bone aging of chub collected in 1992- 1993 also indicated that most Borax Lake were less than one year of age (67-79%), yet a few individuals were aged at 10+ years (Scoppettone 1995). Because Borax Lake chub are only found in one location and the population is apparently dominated by a single year-class of adults, the species has a high inherent risk of extinction. 3 The objectives of this study were to: 1) obtain a mark-recapture population estimate of Borax Lake chub, and 2) to evaluate ways to reduce handling of Borax Lake chub when monitoring population abundance both by modifying previous mark-recapture protocols and by developing snorkeling survey protocols to use as an alternative to mark-recapture estimates. In addition, we collected data regarding lake temperatures, chub size (age) structure, and the condition of the fragile lake shoreline and outflows. Close

• 20. [Article] Spring Chinook Salmon in the Willamette and Sandy Rivers, Progress Reports 2003, F-163-R-08

  Abstract -- The Willamette and Sandy rivers support intense recreational fisheries for spring chinook salmon (Oncorhynchus tshawytscha). Fisheries in these basins rely primarily on annual hatchery releases ...

  Citation × Citation Citation Abstract Copy Title: Spring Chinook Salmon in the Willamette and Sandy Rivers, Progress Reports 2003, F-163-R-08 Abstract -- The Willamette and Sandy rivers support intense recreational fisheries for spring chinook salmon (Oncorhynchus tshawytscha). Fisheries in these basins rely primarily on annual hatchery releases of 5–8 million juveniles. Hatchery programs exist in the McKenzie, Middle Fork Willamette, North and South Santiam, Clackamas, and Sandy rivers mainly as mitigation for dams that blocked natural production areas. Some natural spawning occurs in most of the major basins and a few smaller tributaries upstream of Willamette Falls. The Oregon Fish and Wildlife Commission adopted the Native Fish Conservation Policy (ODFW 2003a) and the Hatchery Management Policy (ODFW 2003b) in part to reduce adverse impacts of hatchery programs on wild native stocks. The Native Fish Conservation Policy recognizes that naturally produced native fish are the foundation for long-term sustainability of native species and hatchery programs, and the fisheries they support. In the past, hatchery programs and fish passage issues were the focus of spring chinook salmon management in the Willamette and Sandy basins. Limited information was collected on the genetic structure among basin populations, on abundance and distribution of natural spawning, on rearing and migrating of juvenile salmon, or on strategies for reducing risks that large hatchery programs pose for wild salmon populations. This study is being implemented to gather this information. A schematic of the study plan is shown in APPENDIX A. We conducted work in the main-stem Willamette River at Willamette Falls, and in the Middle Fork Willamette, McKenzie, Calapooia, North Santiam, South Santiam, Molalla, Clackamas, and Sandy rivers in 2003. Basin descriptions and background information on management and fish runs can be found in subbasin plans developed by the Oregon Department of Fish and Wildlife (ODFW 1988, ODFW 1992a, ODFW 1992b, and ODFW 1996). Task headings below cross reference the study plan outlined in APPENDIX A. This report covers tasks that were worked on in late 2002 through early fall 2003. Title: Spring Chinook Salmon in the Willamette and Sandy Rivers, Progress Reports 2003, F-163-R-08 Abstract -- The Willamette and Sandy rivers support intense recreational fisheries for spring chinook salmon (Oncorhynchus tshawytscha). Fisheries in these basins rely primarily on annual hatchery releases of 5–8 million juveniles. Hatchery programs exist in the McKenzie, Middle Fork Willamette, North and South Santiam, Clackamas, and Sandy rivers mainly as mitigation for dams that blocked natural production areas. Some natural spawning occurs in most of the major basins and a few smaller tributaries upstream of Willamette Falls. The Oregon Fish and Wildlife Commission adopted the Native Fish Conservation Policy (ODFW 2003a) and the Hatchery Management Policy (ODFW 2003b) in part to reduce adverse impacts of hatchery programs on wild native stocks. The Native Fish Conservation Policy recognizes that naturally produced native fish are the foundation for long-term sustainability of native species and hatchery programs, and the fisheries they support. In the past, hatchery programs and fish passage issues were the focus of spring chinook salmon management in the Willamette and Sandy basins. Limited information was collected on the genetic structure among basin populations, on abundance and distribution of natural spawning, on rearing and migrating of juvenile salmon, or on strategies for reducing risks that large hatchery programs pose for wild salmon populations. This study is being implemented to gather this information. A schematic of the study plan is shown in APPENDIX A. We conducted work in the main-stem Willamette River at Willamette Falls, and in the Middle Fork Willamette, McKenzie, Calapooia, North Santiam, South Santiam, Molalla, Clackamas, and Sandy rivers in 2003. Basin descriptions and background information on management and fish runs can be found in subbasin plans developed by the Oregon Department of Fish and Wildlife (ODFW 1988, ODFW 1992a, ODFW 1992b, and ODFW 1996). Task headings below cross reference the study plan outlined in APPENDIX A. This report covers tasks that were worked on in late 2002 through early fall 2003. Close