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• 1. [Article] Theoretical Basis for the CE-QUAL-W2 River Basin Model

  The primary objective of this research is to integrate a riverine model into the existing W2 code that would provide the capability for modeling entire watersheds. This task was accomplished by the following ...

  Citation × Citation Citation Abstract Copy Title: Theoretical Basis for the CE-QUAL-W2 River Basin Model Author: Wells, Scott A., Cole, Thomas M. Year: 2000 The primary objective of this research is to integrate a riverine model into the existing W2 code that would provide the capability for modeling entire watersheds. This task was accomplished by the following steps: • Formal derivation of governing equations and solution algorithm with general channel slope • Detailed analysis of algorithm for linking branches and smooth implementation of boundary conditions between branches • Algorithm development and changes to basic model code (including branch definitions with slope, slope correction to solution algorithm, transfer of momentum between internal branches) These tasks were performed with the following constraints and initiatives: • Utilize the same solution algorithms as the existing code for hydrodynamics and water quality for the riverine system • Allow momentum transfer between adjacent branches for internal head boundary conditions • Refine the turbulence closure hypothesis for riverine sections Title: Theoretical Basis for the CE-QUAL-W2 River Basin Model Author: Wells, Scott A., Cole, Thomas M. Year: 2000 The primary objective of this research is to integrate a riverine model into the existing W2 code that would provide the capability for modeling entire watersheds. This task was accomplished by the following steps: • Formal derivation of governing equations and solution algorithm with general channel slope • Detailed analysis of algorithm for linking branches and smooth implementation of boundary conditions between branches • Algorithm development and changes to basic model code (including branch definitions with slope, slope correction to solution algorithm, transfer of momentum between internal branches) These tasks were performed with the following constraints and initiatives: • Utilize the same solution algorithms as the existing code for hydrodynamics and water quality for the riverine system • Allow momentum transfer between adjacent branches for internal head boundary conditions • Refine the turbulence closure hypothesis for riverine sections Close

• 2. [Article] Waldo Lake Research in 2003

  This report summarizes the first year of an effort to develop a more complete understanding of the physical, chemical, and biological characteristics that drive the ecological processes of Waldo Lake. ...

  Citation × Citation Citation Abstract Copy Title: Waldo Lake Research in 2003 Author: Sytsma, Mark D., Rueter, John, Petersen, Richard, Koch, Roy, Wells, Scott A., Miller, Rich, Johnson, Laura, Annear, Robert Leslie Year: 2004 This report summarizes the first year of an effort to develop a more complete understanding of the physical, chemical, and biological characteristics that drive the ecological processes of Waldo Lake. Modern limnology recognizes the importance of watershed processes as well as in- lake processes in lake ecosystem functioning. Therefore, the approach included consideration of watershed hydrology and forcing functions that determine hydrodynamics of the system as well physical and chemical factors that may be important in regulating primary production in the lake. Data collected since 1998 was summarized and bathymetry of the basin was mapped using state-of-the-art digital depth sounding and GPS technology. A hypothesis that UV light may play an important role in regulating phytoplankton efficiency was examined in an effort to move toward more hypothesis-driven investigations to elucidate the factors controlling productivity. A Quality Assurance/Quality Control Plan was developed to guide data collection for long-term monitoring of the lake. Lastly, initial steps were made in the development of a model of lake hydrodynamics and primary production to aid in integration of the physical, chemical, and biological data that has been collected on the lake. Title: Waldo Lake Research in 2003 Author: Sytsma, Mark D., Rueter, John, Petersen, Richard, Koch, Roy, Wells, Scott A., Miller, Rich, Johnson, Laura, Annear, Robert Leslie Year: 2004 This report summarizes the first year of an effort to develop a more complete understanding of the physical, chemical, and biological characteristics that drive the ecological processes of Waldo Lake. Modern limnology recognizes the importance of watershed processes as well as in- lake processes in lake ecosystem functioning. Therefore, the approach included consideration of watershed hydrology and forcing functions that determine hydrodynamics of the system as well physical and chemical factors that may be important in regulating primary production in the lake. Data collected since 1998 was summarized and bathymetry of the basin was mapped using state-of-the-art digital depth sounding and GPS technology. A hypothesis that UV light may play an important role in regulating phytoplankton efficiency was examined in an effort to move toward more hypothesis-driven investigations to elucidate the factors controlling productivity. A Quality Assurance/Quality Control Plan was developed to guide data collection for long-term monitoring of the lake. Lastly, initial steps were made in the development of a model of lake hydrodynamics and primary production to aid in integration of the physical, chemical, and biological data that has been collected on the lake. Close

• 3. [Article] Modeling the Bull Run River-Reservoir System

  The City of Portland, Water Bureau currently operates 2 Bull Run reservoirs, Reservoir #2 and Reservoir #1 as a water supply source in the Bull Run watershed shown in Figure 1 and Figure 2. The Water Bureau ...

  Citation × Citation Citation Abstract Copy Title: Modeling the Bull Run River-Reservoir System Author: Wells, Scott A. Year: 2000 The City of Portland, Water Bureau currently operates 2 Bull Run reservoirs, Reservoir #2 and Reservoir #1 as a water supply source in the Bull Run watershed shown in Figure 1 and Figure 2. The Water Bureau wants to operate their water supply system in order to meet both water supply objectives and fish habitat objectives downstream of the Bull Run reservoirs in Bull Run River. In addition, a third Bull Run reservoir has been proposed as an additional water supply source. This reservoir also may be used to meet water supply and fish habitat objectives in Bull Run River. This proposal addresses performing the following tasks to evaluate these objectives: Gather data to construct a computer simulation model of the Bull Run system including Bull Run River, Bull Run Reservoirs #1 through #3 and the river basin without reservoirs. Ensure that the model accurately represents the system physics, chemistry and biology. Use the model to evaluate how to meet water supply and fish habitat objectives by implementation of management scenarios. Title: Modeling the Bull Run River-Reservoir System Author: Wells, Scott A. Year: 2000 The City of Portland, Water Bureau currently operates 2 Bull Run reservoirs, Reservoir #2 and Reservoir #1 as a water supply source in the Bull Run watershed shown in Figure 1 and Figure 2. The Water Bureau wants to operate their water supply system in order to meet both water supply objectives and fish habitat objectives downstream of the Bull Run reservoirs in Bull Run River. In addition, a third Bull Run reservoir has been proposed as an additional water supply source. This reservoir also may be used to meet water supply and fish habitat objectives in Bull Run River. This proposal addresses performing the following tasks to evaluate these objectives: Gather data to construct a computer simulation model of the Bull Run system including Bull Run River, Bull Run Reservoirs #1 through #3 and the river basin without reservoirs. Ensure that the model accurately represents the system physics, chemistry and biology. Use the model to evaluate how to meet water supply and fish habitat objectives by implementation of management scenarios. Close

• 4. [Article] Spokane River in Idaho and Washington TMDL Water Quality and Hydrodynamic Modeling Quality Assurance Project Plan -- DRAFT

  The focus of this present study is to perform the following tasks: • Converting the Upper Spokane River CE‐QUAL‐W2 models (Washington and Idaho) to version 3.6 • Combining the Washington and Idaho models • ...

  Citation × Citation Citation Abstract Copy Title: Spokane River in Idaho and Washington TMDL Water Quality and Hydrodynamic Modeling Quality Assurance Project Plan -- DRAFT Author: Wells, Scott A., Berger, Chris Year: 2009 The focus of this present study is to perform the following tasks: • Converting the Upper Spokane River CE‐QUAL‐W2 models (Washington and Idaho) to version 3.6 • Combining the Washington and Idaho models • Reviewing and updating model boundary conditions • Check model calibration • Meet with stakeholders • Develop and Run Modeling Scenarios • Create reports on calibration and scenario runs Title: Spokane River in Idaho and Washington TMDL Water Quality and Hydrodynamic Modeling Quality Assurance Project Plan -- DRAFT Author: Wells, Scott A., Berger, Chris Year: 2009 The focus of this present study is to perform the following tasks: • Converting the Upper Spokane River CE‐QUAL‐W2 models (Washington and Idaho) to version 3.6 • Combining the Washington and Idaho models • Reviewing and updating model boundary conditions • Check model calibration • Meet with stakeholders • Develop and Run Modeling Scenarios • Create reports on calibration and scenario runs Close

• 5. [Article] Tidal-Fluvial and Estuarine Processes in the Lower Columbia River: II. Water Level Models, Floodplain Wetland Inundation, and System Zones

  Spatially varying water-level regimes are a factor controlling estuarine and tidal-fluvial wetland vegetation patterns. As described in Part I, water levels in the Lower Columbia River and estuary (LCRE) ...

  Citation × Citation Citation Abstract Copy Title: Tidal-Fluvial and Estuarine Processes in the Lower Columbia River: II. Water Level Models, Floodplain Wetland Inundation, and System Zones Author: Jay, David A, Borde, Amy B., Diefenderfer, Heida Year: 2016 Spatially varying water-level regimes are a factor controlling estuarine and tidal-fluvial wetland vegetation patterns. As described in Part I, water levels in the Lower Columbia River and estuary (LCRE) are influenced by tides, river flow, hydropower operations, and coastal processes. In Part II, regression models based on tidal theory are used to quantify the role of these processes in determining water levels in the mainstem river and floodplain wetlands, and to provide 21-year inundation hindcasts. Analyses are conducted at 19 LCRE mainstem channel stations and 23 tidally exposed floodplain wetland stations. Sum exceedance values (SEVs) are used to compare wetland hydrologic regimes at different locations on the river floodplain. A new predictive tool is introduced and validated, the potential SEV (pSEV), which can reduce the need for extensive new data collection in wetland restoration planning. Models of water levels and inundation frequency distinguish four zones encompassing eight reaches. The system zones are the wave- and current-dominated Entrance to river kilometer (rkm) 5; the Estuary (rkm-5 to 87), comprised of a lower reach with salinity, the energy minimum (where the turbidity maximum normally occurs), and an upper estuary reach without salinity; the Tidal River (rkm-87 to 229), with lower, middle, and upper reaches in which river flow becomes increasingly dominant over tides in determining water levels; and the steep and weakly tidal Cascade (rkm-229 to 234) immediately downstream from Bonneville Dam. The same zonation is seen in the water levels of floodplain stations, with considerable modification of tidal properties. The system zones and reaches defined here reflect geological features and their boundaries are congruent with five wetland vegetation zones. Title: Tidal-Fluvial and Estuarine Processes in the Lower Columbia River: II. Water Level Models, Floodplain Wetland Inundation, and System Zones Author: Jay, David A, Borde, Amy B., Diefenderfer, Heida Year: 2016 Spatially varying water-level regimes are a factor controlling estuarine and tidal-fluvial wetland vegetation patterns. As described in Part I, water levels in the Lower Columbia River and estuary (LCRE) are influenced by tides, river flow, hydropower operations, and coastal processes. In Part II, regression models based on tidal theory are used to quantify the role of these processes in determining water levels in the mainstem river and floodplain wetlands, and to provide 21-year inundation hindcasts. Analyses are conducted at 19 LCRE mainstem channel stations and 23 tidally exposed floodplain wetland stations. Sum exceedance values (SEVs) are used to compare wetland hydrologic regimes at different locations on the river floodplain. A new predictive tool is introduced and validated, the potential SEV (pSEV), which can reduce the need for extensive new data collection in wetland restoration planning. Models of water levels and inundation frequency distinguish four zones encompassing eight reaches. The system zones are the wave- and current-dominated Entrance to river kilometer (rkm) 5; the Estuary (rkm-5 to 87), comprised of a lower reach with salinity, the energy minimum (where the turbidity maximum normally occurs), and an upper estuary reach without salinity; the Tidal River (rkm-87 to 229), with lower, middle, and upper reaches in which river flow becomes increasingly dominant over tides in determining water levels; and the steep and weakly tidal Cascade (rkm-229 to 234) immediately downstream from Bonneville Dam. The same zonation is seen in the water levels of floodplain stations, with considerable modification of tidal properties. The system zones and reaches defined here reflect geological features and their boundaries are congruent with five wetland vegetation zones. Close