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• 1. [Article] WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks

  This is the publisher’s final pdf. The published article is copyrighted by Springer and can be found at: http://www.springer.com/?SGWID=0-102-0-0-0.

  Citation × Citation Citation Abstract Copy Title: WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks Author: Hanumappa, Mamatha, Bono, Gina, Preece, Justin, Elser, Justin, Nemeth, Denise, Jaiswal, Pankaj, Wu, Kenny This is the publisher’s final pdf. The published article is copyrighted by Springer and can be found at: http://www.springer.com/?SGWID=0-102-0-0-0. Title: WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks Author: Hanumappa, Mamatha, Bono, Gina, Preece, Justin, Elser, Justin, Nemeth, Denise, Jaiswal, Pankaj, Wu, Kenny This is the publisher’s final pdf. The published article is copyrighted by Springer and can be found at: http://www.springer.com/?SGWID=0-102-0-0-0. Close

• 2. [Article] Whole-Plant Growth Stage Ontology for Angiosperms and Its Application in Plant Biology

  This is the publisher’s final pdf. The published article is copyrighted by the American Society of Plant Biologists and can be found at: http://www.plantphysiol.org/.

  Citation × Citation Citation Abstract Copy Title: Whole-Plant Growth Stage Ontology for Angiosperms and Its Application in Plant Biology Author: et al., Kellogg, Elizabeth A., Jaiswal, Pankaj, Pujar, Anuradha This is the publisher’s final pdf. The published article is copyrighted by the American Society of Plant Biologists and can be found at: http://www.plantphysiol.org/. Title: Whole-Plant Growth Stage Ontology for Angiosperms and Its Application in Plant Biology Author: et al., Kellogg, Elizabeth A., Jaiswal, Pankaj, Pujar, Anuradha This is the publisher’s final pdf. The published article is copyrighted by the American Society of Plant Biologists and can be found at: http://www.plantphysiol.org/. Close

• 3. [Article] AISO: Annotation of Image Segments with Ontologies

  This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by BioMed Central Ltd. The published article can be found at: http://www.jbiomedsem.com/.

  Citation × Citation Citation Abstract Copy Title: AISO: Annotation of Image Segments with Ontologies Author: Lingutla, Nikhil Tej, Cooper, Laurel, Preece, Justin, Jaiswal, Pankaj, Moore, Laura, Todorovic, Sinisa This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by BioMed Central Ltd. The published article can be found at: http://www.jbiomedsem.com/. Title: AISO: Annotation of Image Segments with Ontologies Author: Lingutla, Nikhil Tej, Cooper, Laurel, Preece, Justin, Jaiswal, Pankaj, Moore, Laura, Todorovic, Sinisa This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by BioMed Central Ltd. The published article can be found at: http://www.jbiomedsem.com/. Close

• 4. [Article] Maize Metabolic Network Construction and Transcriptome Analysis

  To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The published article is copyrighted by Crop Science ...

  Citation × Citation Citation Abstract Copy Title: Maize Metabolic Network Construction and Transcriptome Analysis Author: Schaeffer, Mary, Harper, Lisa, Cannon, Ethalinda K.S., Amarasinghe, Vindhya, Ren, Liya, Gardiner, Jack, Lawrence, Carolyn J., Dharmawardhana, Palitha D., Thomason, Jim, Monaco, Marcela K., Jaiswal, Pankaj, Naithani, Sushma, Sen, Taner Z., Ware, Doreen To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The published article is copyrighted by Crop Science Society of America and can be found at: https://www.crops.org/. Title: Maize Metabolic Network Construction and Transcriptome Analysis Author: Schaeffer, Mary, Harper, Lisa, Cannon, Ethalinda K.S., Amarasinghe, Vindhya, Ren, Liya, Gardiner, Jack, Lawrence, Carolyn J., Dharmawardhana, Palitha D., Thomason, Jim, Monaco, Marcela K., Jaiswal, Pankaj, Naithani, Sushma, Sen, Taner Z., Ware, Doreen To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The published article is copyrighted by Crop Science Society of America and can be found at: https://www.crops.org/. Close

• 5. [Article] Plant Ontology (PO): a controlled vocabulary of plant structures and growth stages

  This is the publisher’s final pdf. The published article is copyrighted by Hindawi Publishing Corporation and can be found at: http://www.hindawi.com/journals/ijg/. The journal title, Comparative and Functional ...

  Citation × Citation Citation Abstract Copy Title: Plant Ontology (PO): a controlled vocabulary of plant structures and growth stages Author: Ilic, Katica, et al., Jaiswal, Pankaj, Avraham, Shulamit This is the publisher’s final pdf. The published article is copyrighted by Hindawi Publishing Corporation and can be found at: http://www.hindawi.com/journals/ijg/. The journal title, Comparative and Functional Genomics, has been changed to the International Journal of Genomics. Title: Plant Ontology (PO): a controlled vocabulary of plant structures and growth stages Author: Ilic, Katica, et al., Jaiswal, Pankaj, Avraham, Shulamit This is the publisher’s final pdf. The published article is copyrighted by Hindawi Publishing Corporation and can be found at: http://www.hindawi.com/journals/ijg/. The journal title, Comparative and Functional Genomics, has been changed to the International Journal of Genomics. Close

• 6. [Article] The Gene Ontology in 2010: extensions and refinements

  This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by Oxford University Press. The published article can be found at: http://nar.oxfordjournals.org/....

  Citation × Citation Citation Abstract Copy Title: The Gene Ontology in 2010: extensions and refinements Author: et al., Berardini, Tanya Z., Gene Ontology Consortium, Li, Donghui, Jaiswal, Pankaj This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by Oxford University Press. The published article can be found at: http://nar.oxfordjournals.org/. Title: The Gene Ontology in 2010: extensions and refinements Author: et al., Berardini, Tanya Z., Gene Ontology Consortium, Li, Donghui, Jaiswal, Pankaj This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by Oxford University Press. The published article can be found at: http://nar.oxfordjournals.org/. Close

• 7. [Article] The Plant Ontology as a Tool for Comparative Plant Anatomy and Genomic Analyses

  To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The published article is copyrighted by Oxford ...

  Citation × Citation Citation Abstract Copy Title: The Plant Ontology as a Tool for Comparative Plant Anatomy and Genomic Analyses Author: Yamazaki, Yukiko, Stevenson, Dennis W., Rensing, Stefan, Lang, Daniel, Schaeffer, Mary, Huala, Eva, Menda, Naama, Athreya, Balaji, Walls, Ramona L., Cooper, Laurel, Preece, Justin, Elser, Justin, Reski, Ralf, Shrestha, Rosemary, Berardini, Tanya Z., Mungall, Christopher J., Li, Donghui, Jaiswal, Pankaj, Gandolfo, Maria A., Hiss, Manuel, Smith, Barry, Arnaud, Elizabeth To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The published article is copyrighted by Oxford University Press on behalf of Japanese Society of Plant Physiologists and can be found at: http://www.oxfordjournals.org/. Title: The Plant Ontology as a Tool for Comparative Plant Anatomy and Genomic Analyses Author: Yamazaki, Yukiko, Stevenson, Dennis W., Rensing, Stefan, Lang, Daniel, Schaeffer, Mary, Huala, Eva, Menda, Naama, Athreya, Balaji, Walls, Ramona L., Cooper, Laurel, Preece, Justin, Elser, Justin, Reski, Ralf, Shrestha, Rosemary, Berardini, Tanya Z., Mungall, Christopher J., Li, Donghui, Jaiswal, Pankaj, Gandolfo, Maria A., Hiss, Manuel, Smith, Barry, Arnaud, Elizabeth To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The published article is copyrighted by Oxford University Press on behalf of Japanese Society of Plant Physiologists and can be found at: http://www.oxfordjournals.org/. Close

• 8. [Article] Emerging semantics to link phenotype and environment

  This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by PeerJ. The published article can be found at: https://peerj.com/

  Citation × Citation Citation Abstract Copy Title: Emerging semantics to link phenotype and environment Author: Cooper, Laurel D., Buttigieg, Pier Luigi, Bunkers, Daniel E., et al., Thessen, Anne E., Jaiswal, Pankaj This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by PeerJ. The published article can be found at: https://peerj.com/ Title: Emerging semantics to link phenotype and environment Author: Cooper, Laurel D., Buttigieg, Pier Luigi, Bunkers, Daniel E., et al., Thessen, Anne E., Jaiswal, Pankaj This is the publisher’s final pdf. The published article is copyrighted by the author(s) and published by PeerJ. The published article can be found at: https://peerj.com/ Close

• 9. [Article] De Novo Transcriptome Assembly and Analyses of Gene Expression during Photomorphogenesis in Diploid Wheat Triticum monococcum

  This is the publisher’s final pdf. The article was published by the Public Library of Science and is in the public domain. The published article can be found at: http://www.plosone.org/.

  Citation × Citation Citation Abstract Copy Title: De Novo Transcriptome Assembly and Analyses of Gene Expression during Photomorphogenesis in Diploid Wheat Triticum monococcum Author: Hanumappa, Mamatha, Tiwari, Vijay K., Leonard, Jeffrey M., Fox, Samuel E., Preece, Justin, Elser, Justin, et al., Sage, Abigail, Geniza, Matthew, Jaiswal, Pankaj, Naithani, Sushma, Sullivan, Chris This is the publisher’s final pdf. The article was published by the Public Library of Science and is in the public domain. The published article can be found at: http://www.plosone.org/. Title: De Novo Transcriptome Assembly and Analyses of Gene Expression during Photomorphogenesis in Diploid Wheat Triticum monococcum Author: Hanumappa, Mamatha, Tiwari, Vijay K., Leonard, Jeffrey M., Fox, Samuel E., Preece, Justin, Elser, Justin, et al., Sage, Abigail, Geniza, Matthew, Jaiswal, Pankaj, Naithani, Sushma, Sullivan, Chris This is the publisher’s final pdf. The article was published by the Public Library of Science and is in the public domain. The published article can be found at: http://www.plosone.org/. Close

• 10. [Article] Gramene 2013: comparative plant genomics resources

  To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The article was published by Oxford University ...

  Citation × Citation Citation Abstract Copy Title: Gramene 2013: comparative plant genomics resources Author: Lu, Zhenyuan, Stein, Joshua, Stein, Lincoln, Kersey, Paul J., Pasternak, Shiran, Wu, Guanming, Bolser, Dan, Thomason, James, D'Eustachio, Peter, Kumari, Sunita, Preece, Justin, Croft, David, Staines, Dan, Monaco, Marcela K., Ware, Doreen, Wei, Sharon, Jiao, Yinping, Haw, Robin, Olson, Andrew, Dharmawardhana, Palitha, Amarasinghe, Vindhya, Youens-Clark, Ken, Kerhornou, Arnaud, Walts, Brandon, Jaiswal, Pankaj, Naithani, Sushma To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The article was published by Oxford University Press and is in the public domain. Title: Gramene 2013: comparative plant genomics resources Author: Lu, Zhenyuan, Stein, Joshua, Stein, Lincoln, Kersey, Paul J., Pasternak, Shiran, Wu, Guanming, Bolser, Dan, Thomason, James, D'Eustachio, Peter, Kumari, Sunita, Preece, Justin, Croft, David, Staines, Dan, Monaco, Marcela K., Ware, Doreen, Wei, Sharon, Jiao, Yinping, Haw, Robin, Olson, Andrew, Dharmawardhana, Palitha, Amarasinghe, Vindhya, Youens-Clark, Ken, Kerhornou, Arnaud, Walts, Brandon, Jaiswal, Pankaj, Naithani, Sushma To the best of our knowledge, one or more authors of this paper were federal employees when contributing to this work. This is the publisher’s final pdf. The article was published by Oxford University Press and is in the public domain. Close